RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 HGSNATQ68CP4 663 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 VN1R5Q7Z5H4 357 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
VPS50-206ENST00000443443 UBL7Q96S82 380 aaPredicted RBP8.65□□□□□ -1.02
VPS50-206ENST00000443443 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 NIF3L1Q9GZT8 377 aa8.65□□□□□ -1.02
VPS50-206ENST00000443443 A0A1W2PP55 124 aa8.64□□□□□ -1.03
VPS50-206ENST00000443443 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
VPS50-206ENST00000443443 PRR23CQ6ZRP0 262 aa8.64□□□□□ -1.03
VPS50-206ENST00000443443 GALNT12Q8IXK2 581 aa8.64□□□□□ -1.03
VPS50-206ENST00000443443 BHLHE41Q9C0J9 482 aaPredicted RBP8.64□□□□□ -1.03
VPS50-206ENST00000443443 LIN7BQ9HAP6 207 aa8.64□□□□□ -1.03
VPS50-206ENST00000443443 SOWAHDA6NJG2 315 aa8.63□□□□□ -1.03
VPS50-206ENST00000443443 TM4SF5O14894 197 aa8.63□□□□□ -1.03
VPS50-206ENST00000443443 SART1O43290 800 aaKnown RBP8.63□□□□□ -1.03
VPS50-206ENST00000443443 CPNE3O75131 537 aaKnown RBP8.63□□□□□ -1.03
VPS50-206ENST00000443443 USP26Q9BXU7 913 aa8.63□□□□□ -1.03
VPS50-206ENST00000443443 GSTM4Q03013 218 aa8.62□□□□□ -1.03
VPS50-206ENST00000443443 FAM129BQ96TA1 746 aa8.62□□□□□ -1.03
VPS50-206ENST00000443443 RUSC1Q9BVN2 902 aa8.62□□□□□ -1.03
VPS50-206ENST00000443443 A0A096LPE4 126 aa8.61□□□□□ -1.03
VPS50-206ENST00000443443 A0A1W2PPZ6 126 aa8.61□□□□□ -1.03
VPS50-206ENST00000443443 EIF1AYO14602 144 aaKnown RBP8.61□□□□□ -1.03
VPS50-206ENST00000443443 SPRED3Q2MJR0 410 aa8.61□□□□□ -1.03
VPS50-206ENST00000443443 Q6ZS46 218 aa8.61□□□□□ -1.03
VPS50-206ENST00000443443 UTP4Q969X6 686 aaKnown RBP8.61□□□□□ -1.03
VPS50-206ENST00000443443 RNF208Q9H0X6 261 aa8.61□□□□□ -1.03
VPS50-206ENST00000443443 EHD4Q9H223 541 aa8.61□□□□□ -1.03
VPS50-206ENST00000443443 STOML1Q9UBI4 398 aa8.61□□□□□ -1.03
VPS50-206ENST00000443443 DHX15O43143 795 aaKnown RBP8.6□□□□□ -1.03
VPS50-206ENST00000443443 ESRRAP11474 423 aaPredicted RBP8.6□□□□□ -1.03
VPS50-206ENST00000443443 FDX2Q6P4F2 183 aa8.6□□□□□ -1.03
VPS50-206ENST00000443443 CCNJLQ8IV13 435 aa8.6□□□□□ -1.03
VPS50-206ENST00000443443 RAXQ9Y2V3 346 aa8.6□□□□□ -1.03
VPS50-206ENST00000443443 GPR182O15218 404 aa8.59□□□□□ -1.03
VPS50-206ENST00000443443 GADD45BO75293 160 aaPredicted RBP8.59□□□□□ -1.03
VPS50-206ENST00000443443 GRIA4P48058 902 aa8.59□□□□□ -1.03
VPS50-206ENST00000443443 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
VPS50-206ENST00000443443 C12orf50Q8NA57 414 aaPredicted RBP8.59□□□□□ -1.03
VPS50-206ENST00000443443 CCDC74AQ96AQ1 378 aa8.59□□□□□ -1.03
VPS50-206ENST00000443443 DMRTB1Q96MA1 342 aa8.59□□□□□ -1.03
VPS50-206ENST00000443443 TCF12Q99081 682 aa8.59□□□□□ -1.03
VPS50-206ENST00000443443 NPHS2Q9NP85 383 aa8.59□□□□□ -1.03
VPS50-206ENST00000443443 GNEQ9Y223 722 aaKnown RBP8.59□□□□□ -1.03
VPS50-206ENST00000443443 PCDH1Q08174 1060 aa8.58□□□□□ -1.04
VPS50-206ENST00000443443 KIAA0319Q5VV43 1072 aa8.58□□□□□ -1.04
VPS50-206ENST00000443443 RBCK1Q9BYM8 510 aa8.58□□□□□ -1.04
VPS50-206ENST00000443443 DNAJC25Q9H1X3 360 aa8.58□□□□□ -1.04
VPS50-206ENST00000443443 CLEC4MQ9H2X3 399 aaPredicted RBP8.58□□□□□ -1.04
VPS50-206ENST00000443443 FSTP19883 344 aa8.57□□□□□ -1.04
VPS50-206ENST00000443443 ANKRD34AQ69YU3 496 aa8.57□□□□□ -1.04
VPS50-206ENST00000443443 ARMC10Q8N2F6 343 aa8.57□□□□□ -1.04
VPS50-206ENST00000443443 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
VPS50-206ENST00000443443 SOX17Q9H6I2 414 aaPredicted RBP8.57□□□□□ -1.04
VPS50-206ENST00000443443 DCTN4Q9UJW0 460 aa8.57□□□□□ -1.04
VPS50-206ENST00000443443 GAS2O43903 313 aaKnown RBP8.56□□□□□ -1.04
VPS50-206ENST00000443443 MAPK1P28482 360 aa8.56□□□□□ -1.04
VPS50-206ENST00000443443 ZNF423Q2M1K9 1284 aa8.56□□□□□ -1.04
VPS50-206ENST00000443443 UVSSAQ2YD98 709 aa8.56□□□□□ -1.04
VPS50-206ENST00000443443 FAM46AQ96IP4 442 aaKnown RBP8.56□□□□□ -1.04
VPS50-206ENST00000443443 CSRNP1Q96S65 589 aa8.56□□□□□ -1.04
VPS50-206ENST00000443443 LOC100289279A0A1B0GTE1 492 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
VPS50-206ENST00000443443 BMP3P12645 472 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 PLCB3Q01970 1234 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 EXOSC6Q5RKV6 272 aaKnown RBP8.55□□□□□ -1.04
VPS50-206ENST00000443443 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
VPS50-206ENST00000443443 EPS8L3Q8TE67 593 aaKnown RBP8.55□□□□□ -1.04
VPS50-206ENST00000443443 MYRFLQ96LU7 910 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 PSMG3-AS1Q96PY0 264 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 CYP4F12Q9HCS2 524 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 IVNS1ABPQ9Y6Y0 642 aa8.55□□□□□ -1.04
VPS50-206ENST00000443443 MEGF11A6BM72 1044 aa8.54□□□□□ -1.04
VPS50-206ENST00000443443 PREPP48147 710 aa8.54□□□□□ -1.04
VPS50-206ENST00000443443 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
VPS50-206ENST00000443443 TRIM42Q8IWZ5 723 aa8.54□□□□□ -1.04
VPS50-206ENST00000443443 NLRP2Q9NX02 1062 aa8.54□□□□□ -1.04
VPS50-206ENST00000443443 PPP4R2Q9NY27 417 aa8.54□□□□□ -1.04
VPS50-206ENST00000443443 HMX2A2RU54 273 aa8.53□□□□□ -1.04
VPS50-206ENST00000443443 DLGAP3O95886 979 aa8.53□□□□□ -1.04
VPS50-206ENST00000443443 IGHA2P01877 340 aa8.53□□□□□ -1.04
VPS50-206ENST00000443443 CYP11A1P05108 521 aa8.53□□□□□ -1.04
VPS50-206ENST00000443443 RXRBP28702 533 aa8.53□□□□□ -1.04
VPS50-206ENST00000443443 FAM20CQ8IXL6 584 aa8.53□□□□□ -1.04
VPS50-206ENST00000443443 ZFP64Q9NPA5 681 aa8.53□□□□□ -1.04
VPS50-206ENST00000443443 GSC2O15499 205 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 IGLV1-40P01703 118 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 DRD2P14416 443 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 MAOBP27338 520 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 POU4F3Q15319 338 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 ARTNQ5T4W7 220 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 BEND4Q6ZU67 534 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 CLEC10AQ8IUN9 316 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 ALKBH8Q96BT7 664 aaKnown RBP8.52□□□□□ -1.05
VPS50-206ENST00000443443 TMPRSS13Q9BYE2 586 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 C7orf69Q9H7B7 122 aa8.52□□□□□ -1.05
VPS50-206ENST00000443443 TRAK1Q9UPV9 953 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms