RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 USP17L3A6NCW0 530 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 USP17L4A6NCW7 530 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 CTSWP56202 376 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 ZNF280AP59817 542 aaPredicted RBP9.13□□□□□ -0.95
RFX3-206ENST00000442560 CWF19L2Q2TBE0 894 aaKnown RBP9.13□□□□□ -0.95
RFX3-206ENST00000442560 CCDC184Q52MB2 194 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 G2E3Q7L622 706 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 USP17L1Q7RTZ2 530 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 PODNQ7Z5L7 613 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 ZNF687Q8N1G0 1237 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 GMLQ99445 158 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 CDC5LQ99459 802 aaKnown RBP9.13□□□□□ -0.95
RFX3-206ENST00000442560 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 GREM2Q9H772 168 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 MINPP1Q9UNW1 487 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
RFX3-206ENST00000442560 TRPA1O75762 1119 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 SLC10A3P09131 477 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
RFX3-206ENST00000442560 NEXNQ0ZGT2 675 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 TWISTNBQ3B726 338 aaPredicted RBP9.12□□□□□ -0.95
RFX3-206ENST00000442560 GPR153Q6NV75 609 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 MOB2Q70IA6 237 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 CSRNP1Q96S65 589 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 MXD3Q9BW11 206 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 RNF186Q9NXI6 227 aa9.12□□□□□ -0.95
RFX3-206ENST00000442560 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 H7C1W4 665 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 RGS19P49795 217 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 CCT4P50991 539 aaKnown RBP9.11□□□□□ -0.95
RFX3-206ENST00000442560 NBPF9Q3BBW0 867 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 PRAMEF18Q5VWM3 479 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 UBE3BQ7Z3V4 1068 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
RFX3-206ENST00000442560 SAGE1Q9NXZ1 904 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 TRPM7Q96QT4 1865 aa9.11□□□□□ -0.95
RFX3-206ENST00000442560 UBE2Q2LH0YL09 131 aa9.1□□□□□ -0.95
RFX3-206ENST00000442560 IGHMBP2P38935 993 aaKnown RBP9.1□□□□□ -0.95
RFX3-206ENST00000442560 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
RFX3-206ENST00000442560 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
RFX3-206ENST00000442560 RASAL3Q86YV0 1011 aa9.1□□□□□ -0.95
RFX3-206ENST00000442560 WWC1Q8IX03 1113 aa9.1□□□□□ -0.95
RFX3-206ENST00000442560 MED23Q9ULK4 1368 aa9.1□□□□□ -0.95
RFX3-206ENST00000442560 PITPNM2Q9BZ72 1349 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 ZNF609O15014 1411 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 ITGA6P23229 1130 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 FKBP1BP68106 108 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 FLIIQ13045 1269 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 GCKRQ14397 625 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 CCDC27Q2M243 656 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 STRIP1Q5VSL9 837 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 OGFOD1Q8N543 542 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 MS4A4AQ96JQ5 239 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 COA1Q9GZY4 146 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 LEMD3Q9Y2U8 911 aa9.09□□□□□ -0.95
RFX3-206ENST00000442560 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
RFX3-206ENST00000442560 ZNF804BA4D1E1 1349 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 SNAP23O00161 211 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 WNT10BO00744 389 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 SASH1O94885 1247 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 CSF1RP07333 972 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 KLRK1P26718 216 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 CASP7P55210 303 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 GTF2IP78347 998 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
RFX3-206ENST00000442560 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
RFX3-206ENST00000442560 TTLL5Q6EMB2 1281 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 MPHOSPH8Q99549 860 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 PLA2G12BQ9BX93 195 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 ANKRD2Q9GZV1 360 aa9.08□□□□□ -0.96
RFX3-206ENST00000442560 MYO3BQ8WXR4 1341 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 TBC1D8O95759 1140 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 KCNJ4P48050 445 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 CHRNDQ07001 517 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 PRKG1Q13976 671 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 LINS1Q8NG48 757 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 MYH16Q9H6N6 1097 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 HDAC9Q9UKV0 1011 aa9.07□□□□□ -0.96
RFX3-206ENST00000442560 IL16Q14005 1332 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 VAMP4O75379 141 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 TAF5LO75529 589 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 NF2P35240 595 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 SOX10P56693 466 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 EXOSC9Q06265 439 aaKnown RBP9.06□□□□□ -0.96
RFX3-206ENST00000442560 CTU1Q7Z7A3 348 aaKnown RBP9.06□□□□□ -0.96
RFX3-206ENST00000442560 HELBQ8NG08 1087 aaPredicted RBP9.06□□□□□ -0.96
RFX3-206ENST00000442560 CD209Q9NNX6 404 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.06□□□□□ -0.96
RFX3-206ENST00000442560 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 SCN9AQ15858 1988 aa9.06□□□□□ -0.96
RFX3-206ENST00000442560 FANCIQ9NVI1 1328 aa9.05□□□□□ -0.96
RFX3-206ENST00000442560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.05□□□□□ -0.96
RFX3-206ENST00000442560 F6X3S4 739 aa9.05□□□□□ -0.96
RFX3-206ENST00000442560 FOXO4P98177 505 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms