RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 IGF2BP3O00425 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRIM13-205ENST00000442421 ALDH1A1P00352 501 aa16.38■□□□□ 0.21
TRIM13-205ENST00000442421 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
TRIM13-205ENST00000442421 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-205ENST00000442421 HELBQ8NG08 1087 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-205ENST00000442421 WNK4Q96J92 1243 aa16.38■□□□□ 0.21
TRIM13-205ENST00000442421 IRS2Q9Y4H2 1338 aa16.38■□□□□ 0.21
TRIM13-205ENST00000442421 CLRN2A0PK11 232 aa16.37■□□□□ 0.21
TRIM13-205ENST00000442421 TAF5LO75529 589 aa16.37■□□□□ 0.21
TRIM13-205ENST00000442421 CSF1RP07333 972 aa16.37■□□□□ 0.21
TRIM13-205ENST00000442421 MAP3K11Q16584 847 aa16.37■□□□□ 0.21
TRIM13-205ENST00000442421 OTOP1Q7RTM1 612 aa16.37■□□□□ 0.21
TRIM13-205ENST00000442421 AOX1Q06278 1338 aa16.37■□□□□ 0.21
TRIM13-205ENST00000442421 POTEFA5A3E0 1075 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 PPP1R12BO60237 982 aaPredicted RBP16.36■□□□□ 0.21
TRIM13-205ENST00000442421 ZBTB48P10074 688 aaPredicted RBP16.36■□□□□ 0.21
TRIM13-205ENST00000442421 INHBEP58166 350 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 FLIIQ13045 1269 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 CFAP100Q494V2 611 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 MTMR14Q8NCE2 650 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 MYH16Q9H6N6 1097 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 JAG2Q9Y219 1238 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
TRIM13-205ENST00000442421 ANKRD18BA2A2Z9 1011 aa16.35■□□□□ 0.21
TRIM13-205ENST00000442421 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
TRIM13-205ENST00000442421 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
TRIM13-205ENST00000442421 FKBP5Q13451 457 aaPredicted RBP16.35■□□□□ 0.21
TRIM13-205ENST00000442421 NBPF12Q5TAG4 269 aaPredicted RBP16.35■□□□□ 0.21
TRIM13-205ENST00000442421 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
TRIM13-205ENST00000442421 VEZTQ9HBM0 779 aa16.35■□□□□ 0.21
TRIM13-205ENST00000442421 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
TRIM13-205ENST00000442421 GJA5P36382 358 aa16.34■□□□□ 0.21
TRIM13-205ENST00000442421 CRHR2Q13324 411 aa16.34■□□□□ 0.21
TRIM13-205ENST00000442421 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
TRIM13-205ENST00000442421 CD99L2Q8TCZ2 262 aa16.34■□□□□ 0.21
TRIM13-205ENST00000442421 PRMT6Q96LA8 375 aaPredicted RBP16.34■□□□□ 0.21
TRIM13-205ENST00000442421 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
TRIM13-205ENST00000442421 MYO1BO43795 1136 aa16.33■□□□□ 0.2
TRIM13-205ENST00000442421 IL1R1P14778 569 aa16.33■□□□□ 0.2
TRIM13-205ENST00000442421 SUPT20HL1Q3ZLR7 823 aa16.33■□□□□ 0.2
TRIM13-205ENST00000442421 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
TRIM13-205ENST00000442421 ZNF804AQ7Z570 1209 aa16.33■□□□□ 0.2
TRIM13-205ENST00000442421 WWC1Q8IX03 1113 aa16.33■□□□□ 0.2
TRIM13-205ENST00000442421 USP2O75604 605 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-205ENST00000442421 IREB2P48200 963 aaKnown RBP16.32■□□□□ 0.2
TRIM13-205ENST00000442421 RBM5P52756 815 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRIM13-205ENST00000442421 FOXO4P98177 505 aa16.32■□□□□ 0.2
TRIM13-205ENST00000442421 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
TRIM13-205ENST00000442421 GCC1Q96CN9 775 aa16.32■□□□□ 0.2
TRIM13-205ENST00000442421 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
TRIM13-205ENST00000442421 PTPN22Q9Y2R2 807 aa16.32■□□□□ 0.2
TRIM13-205ENST00000442421 ZSWIM8A7E2V4 1837 aa16.31■□□□□ 0.2
TRIM13-205ENST00000442421 CAP1Q01518 475 aa16.31■□□□□ 0.2
TRIM13-205ENST00000442421 RASA3Q14644 834 aa16.31■□□□□ 0.2
TRIM13-205ENST00000442421 INTS3Q68E01 1043 aaKnown RBP16.31■□□□□ 0.2
TRIM13-205ENST00000442421 PIAS4Q8N2W9 510 aaPredicted RBP16.31■□□□□ 0.2
TRIM13-205ENST00000442421 PTPN18Q99952 460 aa16.31■□□□□ 0.2
TRIM13-205ENST00000442421 UNCXA6NJT0 531 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 PLIN1O60240 522 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 FKBP1AP62942 108 aaKnown RBP16.3■□□□□ 0.2
TRIM13-205ENST00000442421 CCDC27Q2M243 656 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 CCDC184Q52MB2 194 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 ANKRD13AQ8IZ07 590 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-205ENST00000442421 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 EFCC1Q9HA90 598 aa16.3■□□□□ 0.2
TRIM13-205ENST00000442421 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
TRIM13-205ENST00000442421 F6X3S4 739 aa16.29■□□□□ 0.2
TRIM13-205ENST00000442421 HABP4Q5JVS0 413 aaKnown RBP16.29■□□□□ 0.2
TRIM13-205ENST00000442421 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
TRIM13-205ENST00000442421 LMBR1LQ6UX01 489 aa16.29■□□□□ 0.2
TRIM13-205ENST00000442421 CDAN1Q8IWY9 1227 aa16.29■□□□□ 0.2
TRIM13-205ENST00000442421 OPTNQ96CV9 577 aa16.29■□□□□ 0.2
TRIM13-205ENST00000442421 CEP290O15078 2479 aa16.28■□□□□ 0.2
TRIM13-205ENST00000442421 IL16Q14005 1332 aa16.28■□□□□ 0.2
TRIM13-205ENST00000442421 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
TRIM13-205ENST00000442421 EN2P19622 333 aaPredicted RBP16.28■□□□□ 0.2
TRIM13-205ENST00000442421 SP3Q02447 781 aa16.28■□□□□ 0.2
TRIM13-205ENST00000442421 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
TRIM13-205ENST00000442421 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
TRIM13-205ENST00000442421 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
TRIM13-205ENST00000442421 MFSD14BQ5SR56 506 aa16.27■□□□□ 0.2
TRIM13-205ENST00000442421 BEND3Q5T5X7 828 aa16.27■□□□□ 0.2
TRIM13-205ENST00000442421 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
TRIM13-205ENST00000442421 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
TRIM13-205ENST00000442421 TDRD3Q9H7E2 651 aaKnown RBP16.27■□□□□ 0.2
TRIM13-205ENST00000442421 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.2
TRIM13-205ENST00000442421 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-205ENST00000442421 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.2
TRIM13-205ENST00000442421 FAM205AQ6ZU69 1335 aa16.26■□□□□ 0.19
TRIM13-205ENST00000442421 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
TRIM13-205ENST00000442421 CCDC57Q2TAC2 916 aa16.26■□□□□ 0.19
TRIM13-205ENST00000442421 BRI3BPQ8WY22 251 aa16.26■□□□□ 0.19
TRIM13-205ENST00000442421 MS4A4AQ96JQ5 239 aa16.26■□□□□ 0.19
TRIM13-205ENST00000442421 TCP10L2B9ZVM9 353 aa16.25■□□□□ 0.19
TRIM13-205ENST00000442421 VAMP4O75379 141 aa16.25■□□□□ 0.19
TRIM13-205ENST00000442421 GYG1P46976 350 aa16.25■□□□□ 0.19
TRIM13-205ENST00000442421 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
TRIM13-205ENST00000442421 TEPSINQ96N21 525 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms