RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 GRIK5Q16478 980 aa10.28□□□□□ -0.76
TIMP1-203ENST00000441738 TAF7LQ5H9L4 462 aa10.28□□□□□ -0.76
TIMP1-203ENST00000441738 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
TIMP1-203ENST00000441738 CAPNS2Q96L46 248 aa10.28□□□□□ -0.76
TIMP1-203ENST00000441738 TMX4Q9H1E5 349 aaPredicted RBP10.28□□□□□ -0.76
TIMP1-203ENST00000441738 CD209Q9NNX6 404 aa10.28□□□□□ -0.76
TIMP1-203ENST00000441738 AOX1Q06278 1338 aa10.28□□□□□ -0.76
TIMP1-203ENST00000441738 LAMB1P07942 1786 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 CA12O43570 354 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 ADORA1P30542 326 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 EPHX2P34913 555 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 GRM1Q13255 1194 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 EAPPQ56P03 285 aaPredicted RBP10.27□□□□□ -0.77
TIMP1-203ENST00000441738 METTL24Q5JXM2 366 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 PODNQ7Z5L7 613 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 FBXO33Q7Z6M2 555 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
TIMP1-203ENST00000441738 COA1Q9GZY4 146 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 FBXO3Q9UK99 471 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
TIMP1-203ENST00000441738 ASTN2O75129 1339 aaPredicted RBP10.27□□□□□ -0.77
TIMP1-203ENST00000441738 THSD7BQ9C0I4 1608 aa10.26□□□□□ -0.77
TIMP1-203ENST00000441738 IL15P40933 162 aaPredicted RBP10.26□□□□□ -0.77
TIMP1-203ENST00000441738 TFCP2Q12800 502 aa10.26□□□□□ -0.77
TIMP1-203ENST00000441738 RSBN1LQ6PCB5 846 aaPredicted RBP10.26□□□□□ -0.77
TIMP1-203ENST00000441738 HACL1Q9UJ83 578 aa10.26□□□□□ -0.77
TIMP1-203ENST00000441738 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
TIMP1-203ENST00000441738 JAG2Q9Y219 1238 aa10.26□□□□□ -0.77
TIMP1-203ENST00000441738 NOP58Q9Y2X3 529 aaKnown RBP10.26□□□□□ -0.77
TIMP1-203ENST00000441738 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
TIMP1-203ENST00000441738 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 BCAMP50895 628 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 ZNF280AP59817 542 aaPredicted RBP10.25□□□□□ -0.77
TIMP1-203ENST00000441738 FMR1Q06787 632 aaKnown RBP eCLIP10.25□□□□□ -0.77
TIMP1-203ENST00000441738 PUM3Q15397 648 aaKnown RBP10.25□□□□□ -0.77
TIMP1-203ENST00000441738 ATP2B3Q16720 1220 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 HABP4Q5JVS0 413 aaKnown RBP10.25□□□□□ -0.77
TIMP1-203ENST00000441738 STRIP1Q5VSL9 837 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 CYP4F22Q6NT55 531 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 USP17L1Q7RTZ2 530 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 MICALL2Q8IY33 904 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 CNTROBQ8N137 903 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 DPF2Q92785 391 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
TIMP1-203ENST00000441738 PCDHAC2Q9Y5I4 1007 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 SIPA1L1O43166 1804 aa10.25□□□□□ -0.77
TIMP1-203ENST00000441738 MAP2K2P36507 400 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 PHKA1P46020 1223 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 KCNJ4P48050 445 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 GTF2IP78347 998 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 TNIP1Q15025 636 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 DLK2Q6UY11 383 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 SAMD7Q7Z3H4 446 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 ZBED3Q96IU2 234 aaPredicted RBP10.24□□□□□ -0.77
TIMP1-203ENST00000441738 PGAP2Q9UHJ9 254 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 CNOT7Q9UIV1 285 aaKnown RBP10.24□□□□□ -0.77
TIMP1-203ENST00000441738 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
TIMP1-203ENST00000441738 DDX60LQ5H9U9 1706 aaKnown RBP10.24□□□□□ -0.77
TIMP1-203ENST00000441738 A0A1B0GUL7 405 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 DLL1O00548 723 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 ZBTB22O15209 634 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 MS4A1P11836 297 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 RPS12P25398 132 aaKnown RBP10.23□□□□□ -0.77
TIMP1-203ENST00000441738 HIBADHP31937 336 aaKnown RBP10.23□□□□□ -0.77
TIMP1-203ENST00000441738 TIMM10P62072 90 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 SCARF1Q14162 830 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 MAP1SQ66K74 1059 aaPredicted RBP10.23□□□□□ -0.77
TIMP1-203ENST00000441738 ZNF804AQ7Z570 1209 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 AGBL3Q8NEM8 1001 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 LPIN2Q92539 896 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 ADARB2Q9NS39 739 aaKnown RBP10.23□□□□□ -0.77
TIMP1-203ENST00000441738 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
TIMP1-203ENST00000441738 HDAC5Q9UQL6 1122 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 EXOC6BQ9Y2D4 811 aa10.23□□□□□ -0.77
TIMP1-203ENST00000441738 SSC5DA1L4H1 1573 aa10.22□□□□□ -0.77
TIMP1-203ENST00000441738 TBC1D10BQ4KMP7 808 aaPredicted RBP10.22□□□□□ -0.77
TIMP1-203ENST00000441738 TTLL5Q6EMB2 1281 aa10.22□□□□□ -0.77
TIMP1-203ENST00000441738 PI16Q6UXB8 463 aa10.22□□□□□ -0.77
TIMP1-203ENST00000441738 USP50Q70EL3 339 aaPredicted RBP10.22□□□□□ -0.77
TIMP1-203ENST00000441738 ZNF384Q8TF68 577 aa10.22□□□□□ -0.77
TIMP1-203ENST00000441738 EAF2Q96CJ1 260 aaPredicted RBP10.22□□□□□ -0.77
TIMP1-203ENST00000441738 CEP126Q9P2H0 1117 aa10.22□□□□□ -0.77
TIMP1-203ENST00000441738 AOC2O75106 756 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.77
TIMP1-203ENST00000441738 FKBP1AP62942 108 aaKnown RBP10.21□□□□□ -0.77
TIMP1-203ENST00000441738 RASGRF1Q13972 1273 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 TNNI3KQ59H18 835 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 CCDC102BQ68D86 513 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 PNMA8AQ86V59 439 aaPredicted RBP10.21□□□□□ -0.77
TIMP1-203ENST00000441738 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 RPAP2Q8IXW5 612 aaPredicted RBP10.21□□□□□ -0.77
TIMP1-203ENST00000441738 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.21□□□□□ -0.77
TIMP1-203ENST00000441738 XAGE2Q96GT9 111 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 DBNDD2Q9BQY9 259 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 DBNLQ9UJU6 430 aaKnown RBP10.21□□□□□ -0.77
TIMP1-203ENST00000441738 FPGT-TNNI3KV9GXZ4 949 aa10.21□□□□□ -0.77
TIMP1-203ENST00000441738 TRAF5O00463 557 aa10.2□□□□□ -0.78
TIMP1-203ENST00000441738 IFIT1P09914 478 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms