RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 GCC1Q96CN9 775 aa26.36■■□□□ 1.81
TRIM39-210ENST00000440271 IRS2Q9Y4H2 1338 aa26.36■■□□□ 1.81
TRIM39-210ENST00000440271 UNCXA6NJT0 531 aa26.35■■□□□ 1.81
TRIM39-210ENST00000440271 SUPT20HL1Q3ZLR7 823 aa26.35■■□□□ 1.81
TRIM39-210ENST00000440271 INTS3Q68E01 1043 aaKnown RBP26.35■■□□□ 1.81
TRIM39-210ENST00000440271 C15orf52Q6ZUT6 534 aaKnown RBP26.35■■□□□ 1.81
TRIM39-210ENST00000440271 SSC5DA1L4H1 1573 aa26.34■■□□□ 1.81
TRIM39-210ENST00000440271 ANKRD18BA2A2Z9 1011 aa26.34■■□□□ 1.81
TRIM39-210ENST00000440271 F8W031 263 aaPredicted RBP26.34■■□□□ 1.81
TRIM39-210ENST00000440271 TAF5LO75529 589 aa26.34■■□□□ 1.81
TRIM39-210ENST00000440271 MYH16Q9H6N6 1097 aa26.34■■□□□ 1.81
TRIM39-210ENST00000440271 CLRN2A0PK11 232 aa26.33■■□□□ 1.81
TRIM39-210ENST00000440271 POTEFA5A3E0 1075 aa26.33■■□□□ 1.81
TRIM39-210ENST00000440271 MYO1BO43795 1136 aa26.33■■□□□ 1.81
TRIM39-210ENST00000440271 CFAP100Q494V2 611 aa26.33■■□□□ 1.81
TRIM39-210ENST00000440271 HELBQ8NG08 1087 aaPredicted RBP26.33■■□□□ 1.81
TRIM39-210ENST00000440271 PRMT6Q96LA8 375 aaPredicted RBP26.33■■□□□ 1.81
TRIM39-210ENST00000440271 SPDYE2BA6NHP3 402 aa26.32■■□□□ 1.8
TRIM39-210ENST00000440271 SPDYE6P0CI01 402 aa26.32■■□□□ 1.8
TRIM39-210ENST00000440271 FLIIQ13045 1269 aa26.32■■□□□ 1.8
TRIM39-210ENST00000440271 NBPF12Q5TAG4 269 aaPredicted RBP26.32■■□□□ 1.8
TRIM39-210ENST00000440271 LINS1Q8NG48 757 aa26.32■■□□□ 1.8
TRIM39-210ENST00000440271 USP2O75604 605 aaPredicted RBP26.31■■□□□ 1.8
TRIM39-210ENST00000440271 IL1R1P14778 569 aa26.31■■□□□ 1.8
TRIM39-210ENST00000440271 DNAAF4Q8WXU2 420 aa26.31■■□□□ 1.8
TRIM39-210ENST00000440271 ERO1AQ96HE7 468 aa26.31■■□□□ 1.8
TRIM39-210ENST00000440271 VEZTQ9HBM0 779 aa26.31■■□□□ 1.8
TRIM39-210ENST00000440271 PTPN22Q9Y2R2 807 aa26.31■■□□□ 1.8
TRIM39-210ENST00000440271 IREB2P48200 963 aaKnown RBP26.3■■□□□ 1.8
TRIM39-210ENST00000440271 FKBP1AP62942 108 aaKnown RBP26.3■■□□□ 1.8
TRIM39-210ENST00000440271 OTUD7BQ6GQQ9 843 aa26.3■■□□□ 1.8
TRIM39-210ENST00000440271 ZNF804AQ7Z570 1209 aa26.3■■□□□ 1.8
TRIM39-210ENST00000440271 GJA5P36382 358 aa26.29■■□□□ 1.8
TRIM39-210ENST00000440271 CRHR2Q13324 411 aa26.29■■□□□ 1.8
TRIM39-210ENST00000440271 FKBP5Q13451 457 aaPredicted RBP26.29■■□□□ 1.8
TRIM39-210ENST00000440271 CD99L2Q8TCZ2 262 aa26.29■■□□□ 1.8
TRIM39-210ENST00000440271 AOX1Q06278 1338 aa26.29■■□□□ 1.8
TRIM39-210ENST00000440271 IFIT5Q13325 482 aaKnown RBP26.28■■□□□ 1.8
TRIM39-210ENST00000440271 PTPN18Q99952 460 aa26.28■■□□□ 1.8
TRIM39-210ENST00000440271 HTTP42858 3142 aa26.28■■□□□ 1.8
TRIM39-210ENST00000440271 TESPA1A2RU30 521 aaPredicted RBP26.27■■□□□ 1.8
TRIM39-210ENST00000440271 RBM5P52756 815 aaKnown RBP eCLIP26.27■■□□□ 1.8
TRIM39-210ENST00000440271 FOXO4P98177 505 aa26.27■■□□□ 1.8
TRIM39-210ENST00000440271 RASA3Q14644 834 aa26.27■■□□□ 1.8
TRIM39-210ENST00000440271 CCDC27Q2M243 656 aa26.27■■□□□ 1.8
TRIM39-210ENST00000440271 HABP4Q5JVS0 413 aaKnown RBP26.27■■□□□ 1.8
TRIM39-210ENST00000440271 WWC1Q8IX03 1113 aa26.27■■□□□ 1.8
TRIM39-210ENST00000440271 ANKRD13AQ8IZ07 590 aa26.27■■□□□ 1.8
TRIM39-210ENST00000440271 JAG2Q9Y219 1238 aa26.27■■□□□ 1.8
TRIM39-210ENST00000440271 EFCC1Q9HA90 598 aa26.26■■□□□ 1.79
TRIM39-210ENST00000440271 SP3Q02447 781 aa26.25■■□□□ 1.79
TRIM39-210ENST00000440271 ARMC5Q96C12 935 aa26.25■■□□□ 1.79
TRIM39-210ENST00000440271 CHMP3Q9Y3E7 222 aa26.25■■□□□ 1.79
TRIM39-210ENST00000440271 ECM29Q5VYK3 1845 aa26.25■■□□□ 1.79
TRIM39-210ENST00000440271 LAMB1P07942 1786 aa26.24■■□□□ 1.79
TRIM39-210ENST00000440271 EN2P19622 333 aaPredicted RBP26.23■■□□□ 1.79
TRIM39-210ENST00000440271 CAP1Q01518 475 aa26.23■■□□□ 1.79
TRIM39-210ENST00000440271 ELP3Q9H9T3 547 aa26.23■■□□□ 1.79
TRIM39-210ENST00000440271 PLIN1O60240 522 aa26.22■■□□□ 1.79
TRIM39-210ENST00000440271 OPTNQ96CV9 577 aa26.22■■□□□ 1.79
TRIM39-210ENST00000440271 MKI67P46013 3256 aaKnown RBP26.22■■□□□ 1.79
TRIM39-210ENST00000440271 KIAA0100Q14667 2235 aaKnown RBP26.22■■□□□ 1.79
TRIM39-210ENST00000440271 IL16Q14005 1332 aa26.21■■□□□ 1.79
TRIM39-210ENST00000440271 TNFAIP1Q13829 316 aa26.21■■□□□ 1.79
TRIM39-210ENST00000440271 LMBR1LQ6UX01 489 aa26.21■■□□□ 1.79
TRIM39-210ENST00000440271 LDHAL6AQ6ZMR3 332 aa26.21■■□□□ 1.79
TRIM39-210ENST00000440271 ZNF594Q96JF6 807 aaPredicted RBP26.21■■□□□ 1.79
TRIM39-210ENST00000440271 MS4A4AQ96JQ5 239 aa26.21■■□□□ 1.79
TRIM39-210ENST00000440271 ZNF70Q9UC06 446 aaPredicted RBP26.21■■□□□ 1.79
TRIM39-210ENST00000440271 FAM205AQ6ZU69 1335 aa26.2■■□□□ 1.79
TRIM39-210ENST00000440271 SPDYE2Q495Y8 402 aa26.2■■□□□ 1.78
TRIM39-210ENST00000440271 CCDC57Q2TAC2 916 aa26.19■■□□□ 1.78
TRIM39-210ENST00000440271 EPHA10Q5JZY3 1008 aa26.19■■□□□ 1.78
TRIM39-210ENST00000440271 BEND3Q5T5X7 828 aa26.19■■□□□ 1.78
TRIM39-210ENST00000440271 TDRD3Q9H7E2 651 aaKnown RBP26.19■■□□□ 1.78
TRIM39-210ENST00000440271 CNNM1Q9NRU3 951 aa26.19■■□□□ 1.78
TRIM39-210ENST00000440271 SERPINA10Q9UK55 444 aa26.19■■□□□ 1.78
TRIM39-210ENST00000440271 F6X3S4 739 aa26.18■■□□□ 1.78
TRIM39-210ENST00000440271 VAMP4O75379 141 aa26.18■■□□□ 1.78
TRIM39-210ENST00000440271 TAF7LQ5H9L4 462 aa26.18■■□□□ 1.78
TRIM39-210ENST00000440271 MFSD14BQ5SR56 506 aa26.18■■□□□ 1.78
TRIM39-210ENST00000440271 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.18■■□□□ 1.78
TRIM39-210ENST00000440271 TDRD7Q8NHU6 1098 aaKnown RBP26.18■■□□□ 1.78
TRIM39-210ENST00000440271 TEPSINQ96N21 525 aa26.18■■□□□ 1.78
TRIM39-210ENST00000440271 TMEM106CQ9BVX2 250 aa26.18■■□□□ 1.78
TRIM39-210ENST00000440271 TTF2Q9UNY4 1162 aaKnown RBP26.18■■□□□ 1.78
TRIM39-210ENST00000440271 A0A1B0GUL6 1792 aa26.18■■□□□ 1.78
TRIM39-210ENST00000440271 RBBP6Q7Z6E9 1792 aaKnown RBP26.18■■□□□ 1.78
TRIM39-210ENST00000440271 CENPFP49454 3210 aa26.17■■□□□ 1.78
TRIM39-210ENST00000440271 CCDC184Q52MB2 194 aa26.17■■□□□ 1.78
TRIM39-210ENST00000440271 CDAN1Q8IWY9 1227 aa26.17■■□□□ 1.78
TRIM39-210ENST00000440271 CNKSR2Q8WXI2 1034 aa26.17■■□□□ 1.78
TRIM39-210ENST00000440271 BRI3BPQ8WY22 251 aa26.17■■□□□ 1.78
TRIM39-210ENST00000440271 FANCIQ9NVI1 1328 aa26.16■■□□□ 1.78
TRIM39-210ENST00000440271 DZIP1LQ8IYY4 767 aaKnown RBP26.16■■□□□ 1.78
TRIM39-210ENST00000440271 ZNF333Q96JL9 665 aa26.16■■□□□ 1.78
TRIM39-210ENST00000440271 HIBADHP31937 336 aaKnown RBP26.15■■□□□ 1.78
TRIM39-210ENST00000440271 GYG1P46976 350 aa26.15■■□□□ 1.78
TRIM39-210ENST00000440271 MAP3K9P80192 1104 aa26.15■■□□□ 1.78
TRIM39-210ENST00000440271 ARHGEF6Q15052 776 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms