RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SPECC1Q5M775 1068 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 KRBA2Q6ZNG9 492 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 PLBD2Q8NHP8 589 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 GDAP1L1Q96MZ0 367 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 FEZ1Q99689 392 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 PTPDC1A2A3K4 754 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 TRIM66O15016 1216 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 TPM3P06753 285 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 TOB2Q14106 344 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 STK38Q15208 465 aa11.54□□□□□ -0.56
CDC42SE1-202ENST00000439374 C3P01024 1663 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 ST5P78524 1137 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 TRDNQ13061 729 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 KRT32Q14532 448 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 TMCO3Q6UWJ1 677 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 GOLGA8BA8MQT2 603 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 MYL10Q9BUA6 226 aa11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-202ENST00000439374 KLF18A0A0U1RQI7 1052 aa11.52□□□□□ -0.56
CDC42SE1-202ENST00000439374 ATP5JP18859 108 aa11.52□□□□□ -0.56
CDC42SE1-202ENST00000439374 ZAP70P43403 619 aa11.52□□□□□ -0.56
CDC42SE1-202ENST00000439374 SCRN1Q12765 414 aa11.52□□□□□ -0.56
CDC42SE1-202ENST00000439374 MTX1Q13505 466 aa11.52□□□□□ -0.56
CDC42SE1-202ENST00000439374 SCAND2PQ9GZW5 306 aaPredicted RBP11.52□□□□□ -0.56
CDC42SE1-202ENST00000439374 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.56
CDC42SE1-202ENST00000439374 FAM193AP78312 1265 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 WWC2Q6AWC2 1192 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 FUCA2Q9BTY2 467 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 XPO4Q9C0E2 1151 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 INCENPQ9NQS7 918 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 COBLO75128 1261 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 SYNE3Q6ZMZ3 975 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 USP28Q96RU2 1077 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 DESI2Q9BSY9 194 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 ABCF2Q9UG63 623 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 PAXBP1Q9Y5B6 917 aa11.52□□□□□ -0.57
CDC42SE1-202ENST00000439374 EYA2O00167 538 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 PES1O00541 588 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 NRDCO43847 1150 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 ATP1A3P13637 1013 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 CLCN6P51797 869 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 KCNQ4P56696 695 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 STOX1Q6ZVD7 989 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 XAGE2Q96GT9 111 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 ZKSCAN3Q9BRR0 538 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 COPRSQ9NQ92 184 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 CCDC191Q8NCU4 936 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 CLSTN2Q9H4D0 955 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 ANKARQ7Z5J8 1434 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 NPHP4O75161 1426 aaPredicted RBP11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 DPCR1Q3MIW9 517 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 DNAJC5Q9H3Z4 198 aa11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 DDX19AQ9NUU7 478 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 ORC3Q9UBD5 711 aaPredicted RBP11.51□□□□□ -0.57
CDC42SE1-202ENST00000439374 UBR1Q8IWV7 1749 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 HSPD1P10809 573 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 IL2RBP14784 551 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 IL15P40933 162 aaPredicted RBP11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 GNG11P61952 73 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 SCARF1Q14162 830 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 IMMTQ16891 758 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 GPATCH11Q8N954 259 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 GOLPH3LQ9H4A5 285 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 BTG4Q9NY30 223 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 RSPH14Q9UHP6 348 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 MON2Q7Z3U7 1717 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 E7EWF7 191 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 ZNF213O14771 459 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 TFRCP02786 760 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 KLHL10Q6JEL2 608 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 OSBP2Q969R2 916 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 TM6SF1Q9BZW5 370 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 HMG20BQ9P0W2 317 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 JAG2Q9Y219 1238 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 RNF113AO15541 343 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 C8orf76Q96K31 380 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
CDC42SE1-202ENST00000439374 M0R2C6 588 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 HAUS7Q99871 368 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 LZTFL1Q9NQ48 299 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 CFAP45Q9UL16 551 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 CTIFO43310 598 aaKnown RBP11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 PRC1O43663 620 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 MIGA1Q8NAN2 632 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 AIFM3Q96NN9 605 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
CDC42SE1-202ENST00000439374 MINDY4BA8MYZ0 360 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms