RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 LIAT1Q6ZQX7 453 aa11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 STK32AQ8WU08 396 aa11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 TEX13AQ9BXU3 409 aaPredicted RBP11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 RASA1P20936 1047 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 BICDL1Q6ZP65 573 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 BRIP1Q9BX63 1249 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 DOLKQ9UPQ8 538 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
LSMEM1-202ENST00000439068 ESPNB1AK53 854 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 IL13P35225 146 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 SOGA3Q5TF21 947 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 TRMT44Q8IYL2 757 aaKnown RBP11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 USTQ9Y2C2 406 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 ZBTB1Q9Y2K1 713 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 PCNTO95613 3336 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 COL15A1P39059 1388 aa11.75□□□□□ -0.53
LSMEM1-202ENST00000439068 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 C21orf2O43822 256 aa11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 EML3Q32P44 896 aa11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 TMEM164Q5U3C3 297 aa11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 CNKSR1Q969H4 720 aa11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 TNRC6CQ9HCJ0 1690 aaKnown RBP11.74□□□□□ -0.53
LSMEM1-202ENST00000439068 IQCA1LA6NCM1 817 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L15C9J2P7 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L10C9JJH3 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L13C9JLJ4 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L12C9JPN9 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L11C9JVI0 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L21D6R901 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L18D6R9N7 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L22D6RA61 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L17D6RBQ6 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L19D6RCP7 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L20D6RJB6 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 NFKBIEO00221 500 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 RPIAP49247 311 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 WNT7BP56706 349 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 CLDN10P78369 228 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 PTK7Q13308 1070 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 KCTD17Q8N5Z5 321 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 PCDHB11Q9Y5F2 797 aa11.73□□□□□ -0.53
LSMEM1-202ENST00000439068 POTECB2RU33 542 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 HMOX1P09601 288 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 ST5P78524 1137 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 TEFQ10587 303 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 ARID5BQ14865 1188 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 OGFOD1Q8N543 542 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 TAOK3Q9H2K8 898 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 SBF1O95248 1867 aa11.72□□□□□ -0.53
LSMEM1-202ENST00000439068 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 CD2BP2O95400 341 aaKnown RBP11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 PDE4CQ08493 712 aa11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 ELOAQ14241 798 aaKnown RBP11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 NBPF20Q3BBV1 942 aa11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 RNF20Q5VTR2 975 aa11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 TBC1D9BQ66K14 1250 aa11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 EHBP1Q8NDI1 1231 aa11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
LSMEM1-202ENST00000439068 CLSPNQ9HAW4 1339 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 LTBP3Q9NS15 1303 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 LZTS3O60299 673 aaPredicted RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 DDNO94850 711 aaPredicted RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 HSPA5P11021 654 aaKnown RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 MTHFSDQ2M296 383 aaKnown RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 VASH1Q7L8A9 365 aaPredicted RBP11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 CNBD1Q8NA66 436 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 MASTLQ96GX5 879 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 KIAA1024Q9UPX6 916 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
LSMEM1-202ENST00000439068 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
LSMEM1-202ENST00000439068 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
LSMEM1-202ENST00000439068 INTS6LQ5JSJ4 861 aaKnown RBP11.69□□□□□ -0.54
LSMEM1-202ENST00000439068 PRR5LQ6MZQ0 368 aa11.69□□□□□ -0.54
LSMEM1-202ENST00000439068 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
LSMEM1-202ENST00000439068 LDHDQ86WU2 507 aa11.69□□□□□ -0.54
LSMEM1-202ENST00000439068 DNAAF2Q9NVR5 837 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms