RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PFKFB1P16118 471 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 CASQ1P31415 396 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 NBPF6Q5VWK0 638 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 NBPF4Q96M43 638 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 ARFGAP3Q9NP61 516 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 HMG20BQ9P0W2 317 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 PFKFB2O60825 505 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 LRRFIP1Q32MZ4 808 aaKnown RBP15.47■□□□□ 0.07
ACTN1-204ENST00000438964 RIC3Q7Z5B4 369 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 LINC00301Q8NCQ3 95 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 CCDC12Q8WUD4 166 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-204ENST00000438964 IMPACTQ9P2X3 320 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 MON2Q7Z3U7 1717 aa15.47■□□□□ 0.07
ACTN1-204ENST00000438964 ATP5J2-PTCD1G3V325 749 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 SPTLC2O15270 562 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
ACTN1-204ENST00000438964 WDHD1O75717 1129 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-204ENST00000438964 RHOXF2BP0C7M4 288 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 ZNF530Q6P9A1 599 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-204ENST00000438964 HINFPQ9BQA5 517 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 RHOXF2Q9BQY4 288 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 RABEP2Q9H5N1 569 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 ALDH1L1O75891 902 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 PDIA3P30101 505 aaKnown RBP15.46■□□□□ 0.07
ACTN1-204ENST00000438964 SETD1AO15047 1707 aaKnown RBP15.46■□□□□ 0.07
ACTN1-204ENST00000438964 CARMIL3Q8ND23 1372 aa15.46■□□□□ 0.07
ACTN1-204ENST00000438964 EFCAB8A8MWE9 144 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 UBE2Q2LH0YL09 131 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 COBLO75128 1261 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 CDC27P30260 824 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 LONRF2Q1L5Z9 754 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 KSR2Q6VAB6 950 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.06
ACTN1-204ENST00000438964 GDAP1L1Q96MZ0 367 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 FUT8Q9BYC5 575 aa15.46■□□□□ 0.06
ACTN1-204ENST00000438964 DBF4Q9UBU7 674 aaPredicted RBP15.46■□□□□ 0.06
ACTN1-204ENST00000438964 RRP15Q9Y3B9 282 aaKnown RBP15.46■□□□□ 0.06
ACTN1-204ENST00000438964 ITSN1Q15811 1721 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 KRT32Q14532 448 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 ADALQ6DHV7 355 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 MYD88Q99836 296 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 TIMM10P62072 90 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 GPS2Q13227 327 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 C8orf76Q96K31 380 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 SNRKQ9NRH2 765 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 DENND2AQ9ULE3 1009 aa15.45■□□□□ 0.06
ACTN1-204ENST00000438964 IGKV5-2P06315 115 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 NLRP12P59046 1061 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 PDE4BQ07343 736 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 MCMDC2Q4G0Z9 681 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 NAA16Q6N069 864 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-204ENST00000438964 ADGRL3Q9HAR2 1447 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 E7EWF7 191 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 CCDC158Q5M9N0 1113 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 INTS13Q9NVM9 706 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 PHLPP2Q6ZVD8 1323 aa15.44■□□□□ 0.06
ACTN1-204ENST00000438964 IRX3P78415 501 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-204ENST00000438964 LONRF3Q496Y0 759 aa15.43■□□□□ 0.06
ACTN1-204ENST00000438964 SYNE3Q6ZMZ3 975 aa15.43■□□□□ 0.06
ACTN1-204ENST00000438964 GRAMD1CQ8IYS0 662 aa15.43■□□□□ 0.06
ACTN1-204ENST00000438964 MRPL44Q9H9J2 332 aaKnown RBP15.43■□□□□ 0.06
ACTN1-204ENST00000438964 FAN1Q9Y2M0 1017 aa15.43■□□□□ 0.06
ACTN1-204ENST00000438964 UBE3BQ7Z3V4 1068 aa15.43■□□□□ 0.06
ACTN1-204ENST00000438964 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-204ENST00000438964 RGPD1P0DJD0 1748 aa15.43■□□□□ 0.06
ACTN1-204ENST00000438964 DHX16O60231 1041 aaKnown RBP15.43■□□□□ 0.06
ACTN1-204ENST00000438964 PLEKHG3A1L390 1219 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 SOWAHDA6NJG2 315 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 ABL1P00519 1130 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 ATP2B1P20020 1258 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
ACTN1-204ENST00000438964 TNNI3KQ59H18 835 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 USPL1Q5W0Q7 1092 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 CREBRFQ8IUR6 639 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 PNKPQ96T60 521 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 BAG1Q99933 345 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-204ENST00000438964 FPGT-TNNI3KV9GXZ4 949 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 PXDNLA1KZ92 1463 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 SYKP43405 635 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 SRLQ86TD4 932 aa15.42■□□□□ 0.06
ACTN1-204ENST00000438964 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 SLC20A2Q08357 652 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 MYSM1Q5VVJ2 828 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 KLHL34Q8N239 644 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 DRC1Q96MC2 740 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 KLF18A0A0U1RQI7 1052 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 E2F4Q16254 413 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 FOXP4Q8IVH2 680 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-204ENST00000438964 AK7Q96M32 723 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 CPLX1O14810 134 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 TSGA10IPQ3SY00 556 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 TMEM139Q8IV31 216 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 MRFAP1Q9Y605 127 aa15.41■□□□□ 0.06
ACTN1-204ENST00000438964 PHKBQ93100 1093 aa15.4■□□□□ 0.06
ACTN1-204ENST00000438964 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-204ENST00000438964 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms