RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CLEC4MQ9H2X3 399 aaPredicted RBP6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 SOX13Q9UN79 622 aa6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 GNB5O14775 395 aa6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 USP17L7P0C7H9 530 aa6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 SPRED3Q2MJR0 410 aa6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 TRAPPC3LQ5T215 181 aa6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 NPM2Q86SE8 214 aaKnown RBP6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 FAM161BQ96MY7 647 aa6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 NOP53Q9NZM5 478 aaKnown RBP6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 AKAP2Q9Y2D5 859 aa6.31□□□□□ -1.4
LSM1P1-201ENST00000438629 UNCXA6NJT0 531 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 H3BRJ5 948 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 NID1P14543 1247 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 RAC1P63000 192 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 PIP4K2BP78356 416 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 PCDH1Q08174 1060 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 IKBKEQ14164 716 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 TAF1CQ15572 869 aaPredicted RBP6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 LINC00114Q6XXX2 140 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 C8orf86Q6ZUL3 223 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 SCARF2Q96GP6 870 aaPredicted RBP6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 ZNF576Q9H609 170 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 OSGEPQ9NPF4 335 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 SH2B1Q9NRF2 756 aaPredicted RBP6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 RNF19AQ9NV58 838 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 ADAMTS8Q9UP79 889 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 USP31Q70CQ4 1352 aa6.3□□□□□ -1.4
LSM1P1-201ENST00000438629 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 HOXB4P17483 251 aaPredicted RBP6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 BAG6P46379 1132 aa6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 ST13P50502 369 aaKnown RBP6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 TRIM28Q13263 835 aaKnown RBP6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 VN1R5Q7Z5H4 357 aa6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 DMRTC2Q8IXT2 367 aaPredicted RBP6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 KLHL23Q8NBE8 558 aa6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 TMEM87AQ8NBN3 555 aa6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 C3orf58Q8NDZ4 430 aa6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
LSM1P1-201ENST00000438629 LINC01387J3KSC0 135 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 SCAMP3O14828 347 aaKnown RBP6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 RLBP1P12271 317 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 COL9A3Q14050 684 aaPredicted RBP6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 TSNAXIP1Q2TAA8 658 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 ZNF428Q96B54 188 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 BACH2Q9BYV9 841 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 SEC31BQ9NQW1 1179 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 KIAA1522Q9P206 1035 aaPredicted RBP6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 TTF2Q9UNY4 1162 aaKnown RBP6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
LSM1P1-201ENST00000438629 FSCN2O14926 492 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 B3GALT4O96024 378 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 CTSHP09668 335 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 EPHA1P21709 976 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 SNRPNP63162 240 aaKnown RBP6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 C19orf57Q0VDD7 668 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 PRRT3Q5FWE3 981 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 ILDR2Q71H61 639 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 NOC4LQ9BVI4 516 aaKnown RBP6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 PLVAPQ9BX97 442 aa6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 METTL5Q9NRN9 209 aaKnown RBP6.27□□□□□ -1.41
LSM1P1-201ENST00000438629 SOX1O00570 391 aaPredicted RBP6.26□□□□□ -1.41
LSM1P1-201ENST00000438629 HNRNPUQ00839 825 aaKnown RBP eCLIP6.26□□□□□ -1.41
LSM1P1-201ENST00000438629 ZNF423Q2M1K9 1284 aa6.26□□□□□ -1.41
LSM1P1-201ENST00000438629 ALYREFQ86V81 257 aaKnown RBP6.26□□□□□ -1.41
LSM1P1-201ENST00000438629 FBXO11Q86XK2 927 aa6.26□□□□□ -1.41
LSM1P1-201ENST00000438629 GPN3Q9UHW5 284 aaPredicted RBP6.26□□□□□ -1.41
LSM1P1-201ENST00000438629 A0A0A0MRY4 1105 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 CYP11A1P05108 521 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 CDC25BP30305 580 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 AP3B2Q13367 1082 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 PWP1Q13610 501 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 SUZ12Q15022 739 aaKnown RBP6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 SETDB1Q15047 1291 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 CCDC85BQ15834 202 aaPredicted RBP6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 SLC7A3Q8WY07 619 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 TRIM11Q96F44 468 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 EMILIN2Q9BXX0 1053 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 STK17AQ9UEE5 414 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
LSM1P1-201ENST00000438629 RNF225M0QZC1 329 aaPredicted RBP6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 ZNF76P36508 570 aa6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 GSTM4Q03013 218 aa6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 HP1BP3Q5SSJ5 553 aaPredicted RBP6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 DIEXFQ68CQ4 756 aaKnown RBP6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 ADAMTSL4Q6UY14 1074 aa6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 TPTE2Q6XPS3 522 aa6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 RNF34Q969K3 372 aa6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 NECAB3Q96P71 396 aaPredicted RBP6.24□□□□□ -1.41
LSM1P1-201ENST00000438629 RECKO95980 971 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 ELNP15502 786 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 NME2P22392 152 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 CD68P34810 354 aaPredicted RBP6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 FAAP100Q0VG06 881 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 LRRC14Q15048 493 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms