RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 TDRD7Q8NHU6 1098 aaKnown RBP19.52■□□□□ 0.72
TTC3-209ENST00000438055 MARCKSP29966 332 aaPredicted RBP19.52■□□□□ 0.71
TTC3-209ENST00000438055 ZNF274Q96GC6 653 aaPredicted RBP19.52■□□□□ 0.71
TTC3-209ENST00000438055 TRMT1Q9NXH9 659 aaKnown RBP19.52■□□□□ 0.71
TTC3-209ENST00000438055 N4BP2Q86UW6 1770 aaPredicted RBP19.52■□□□□ 0.71
TTC3-209ENST00000438055 ZFYP08048 801 aaPredicted RBP19.51■□□□□ 0.71
TTC3-209ENST00000438055 RRP12Q5JTH9 1297 aaKnown RBP19.51■□□□□ 0.71
TTC3-209ENST00000438055 ZSCAN25Q6NSZ9 544 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 CPLX2Q6PUV4 134 aaKnown RBP19.51■□□□□ 0.71
TTC3-209ENST00000438055 ZMYND15Q9H091 742 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 PCDHA7Q9UN72 937 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 CARMIL3Q8ND23 1372 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 RFX7Q2KHR2 1363 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 ITGA6P23229 1130 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 APPBP2Q92624 585 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 SPTLC3Q9NUV7 552 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
TTC3-209ENST00000438055 PALLDQ8WX93 1383 aa19.5■□□□□ 0.71
TTC3-209ENST00000438055 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
TTC3-209ENST00000438055 ANKRD18BA2A2Z9 1011 aa19.5■□□□□ 0.71
TTC3-209ENST00000438055 ARID5BQ14865 1188 aa19.5■□□□□ 0.71
TTC3-209ENST00000438055 CACTINQ8WUQ7 758 aaKnown RBP19.5■□□□□ 0.71
TTC3-209ENST00000438055 CLIC4Q9Y696 253 aa19.5■□□□□ 0.71
TTC3-209ENST00000438055 CIAO1O76071 339 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 CCDC82Q8N4S0 544 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 RGPD5Q99666 1765 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 CAVIN2O95810 425 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 MST1RQ04912 1400 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 SPTLC2O15270 562 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 AIDAQ96BJ3 306 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 GREM2Q9H772 168 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
TTC3-209ENST00000438055 JCADQ9P266 1359 aa19.48■□□□□ 0.71
TTC3-209ENST00000438055 TRIM29Q14134 588 aa19.48■□□□□ 0.71
TTC3-209ENST00000438055 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
TTC3-209ENST00000438055 ATP2B1P20020 1258 aa19.48■□□□□ 0.71
TTC3-209ENST00000438055 CCDC144BQ3MJ40 725 aa19.48■□□□□ 0.71
TTC3-209ENST00000438055 BCL2L12Q9HB09 334 aa19.48■□□□□ 0.71
TTC3-209ENST00000438055 SKILP12757 684 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 ADD1P35611 737 aaKnown RBP19.47■□□□□ 0.71
TTC3-209ENST00000438055 METAP2P50579 478 aaKnown RBP eCLIP19.47■□□□□ 0.71
TTC3-209ENST00000438055 NDUFA8P51970 172 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 TPM4P67936 248 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 CCDC112Q8NEF3 446 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 B4E1Z4 1266 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 IRS4O14654 1257 aaPredicted RBP19.47■□□□□ 0.71
TTC3-209ENST00000438055 SLC3A2P08195 630 aaKnown RBP19.47■□□□□ 0.71
TTC3-209ENST00000438055 FDPSP14324 419 aaKnown RBP19.47■□□□□ 0.71
TTC3-209ENST00000438055 CBX1P83916 185 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 AIFM3Q96NN9 605 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 MYL10Q9BUA6 226 aa19.47■□□□□ 0.71
TTC3-209ENST00000438055 PDCL2Q8N4E4 241 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 PHKBQ93100 1093 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 ALG1Q9BT22 464 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 HLFQ16534 295 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 PPP4R3BQ5MIZ7 849 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 PLA2G4DQ86XP0 818 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 KCNG4Q8TDN1 519 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 DENND2AQ9ULE3 1009 aa19.46■□□□□ 0.71
TTC3-209ENST00000438055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.45■□□□□ 0.7
TTC3-209ENST00000438055 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
TTC3-209ENST00000438055 PCCAP05165 728 aaPredicted RBP19.45■□□□□ 0.7
TTC3-209ENST00000438055 MYSM1Q5VVJ2 828 aa19.45■□□□□ 0.7
TTC3-209ENST00000438055 ZBTB38Q8NAP3 1195 aaPredicted RBP19.45■□□□□ 0.7
TTC3-209ENST00000438055 FBXO18Q8NFZ0 1043 aa19.45■□□□□ 0.7
TTC3-209ENST00000438055 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
TTC3-209ENST00000438055 CCDC69A6NI79 296 aa19.45■□□□□ 0.7
TTC3-209ENST00000438055 MCAMP43121 646 aa19.45■□□□□ 0.7
TTC3-209ENST00000438055 RBM43Q6ZSC3 357 aaKnown RBP19.45■□□□□ 0.7
TTC3-209ENST00000438055 SPDYE4A6NLX3 237 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 ATL3Q6DD88 541 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 NPHP1O15259 732 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 NRDCO43847 1150 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 PIGBQ92521 554 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 SNAP23O00161 211 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 SNW1Q13573 536 aaKnown RBP19.44■□□□□ 0.7
TTC3-209ENST00000438055 ADALQ6DHV7 355 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
TTC3-209ENST00000438055 IQCB1Q15051 598 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 LINC00301Q8NCQ3 95 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 MPHOSPH8Q99549 860 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 CARD10Q9BWT7 1032 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 TEX13AQ9BXU3 409 aaPredicted RBP19.43■□□□□ 0.7
TTC3-209ENST00000438055 NAPBQ9H115 298 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 CRYBG1Q9Y4K1 1723 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 ZNF532Q9HCE3 1301 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 PHKA1P46020 1223 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 TMEM67Q5HYA8 995 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 C5P01031 1676 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 GOLGA8AA7E2F4 631 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 PTPN14Q15678 1187 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 TMC6Q7Z403 805 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 INCENPQ9NQS7 918 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 RTEL1Q9NZ71 1219 aa19.43■□□□□ 0.7
TTC3-209ENST00000438055 LMOD1P29536 600 aaPredicted RBP19.42■□□□□ 0.7
TTC3-209ENST00000438055 DPCR1Q3MIW9 517 aa19.42■□□□□ 0.7
TTC3-209ENST00000438055 ANO1Q5XXA6 986 aa19.42■□□□□ 0.7
TTC3-209ENST00000438055 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
TTC3-209ENST00000438055 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms