RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 KIAA0825Q8IV33 1275 aa22.13■■□□□ 1.13
NCSTN-208ENST00000438008 DCPSQ96C86 337 aaKnown RBP22.13■■□□□ 1.13
NCSTN-208ENST00000438008 BCAMP50895 628 aa22.12■■□□□ 1.13
NCSTN-208ENST00000438008 ATP8B2P98198 1209 aa22.12■■□□□ 1.13
NCSTN-208ENST00000438008 POLA2Q14181 598 aa22.11■■□□□ 1.13
NCSTN-208ENST00000438008 ATP2B3Q16720 1220 aa22.11■■□□□ 1.13
NCSTN-208ENST00000438008 CST9Q5W186 159 aa22.11■■□□□ 1.13
NCSTN-208ENST00000438008 KRT26Q7Z3Y9 468 aa22.11■■□□□ 1.13
NCSTN-208ENST00000438008 USP48Q86UV5 1035 aa22.11■■□□□ 1.13
NCSTN-208ENST00000438008 SSH3Q8TE77 659 aa22.11■■□□□ 1.13
NCSTN-208ENST00000438008 GGA3Q9NZ52 723 aa22.11■■□□□ 1.13
NCSTN-208ENST00000438008 ASTN2O75129 1339 aaPredicted RBP22.1■■□□□ 1.13
NCSTN-208ENST00000438008 PITPNM2Q9BZ72 1349 aa22.1■■□□□ 1.13
NCSTN-208ENST00000438008 WNT10BO00744 389 aa22.1■■□□□ 1.13
NCSTN-208ENST00000438008 ZBED3Q96IU2 234 aaPredicted RBP22.1■■□□□ 1.13
NCSTN-208ENST00000438008 JAG2Q9Y219 1238 aa22.1■■□□□ 1.13
NCSTN-208ENST00000438008 MVPQ14764 893 aaKnown RBP22.09■■□□□ 1.13
NCSTN-208ENST00000438008 NBPF9Q3BBW0 867 aa22.09■■□□□ 1.13
NCSTN-208ENST00000438008 MFSD14BQ5SR56 506 aa22.09■■□□□ 1.13
NCSTN-208ENST00000438008 ANGEL2Q5VTE6 544 aaKnown RBP22.09■■□□□ 1.13
NCSTN-208ENST00000438008 JMYQ8N9B5 988 aa22.09■■□□□ 1.13
NCSTN-208ENST00000438008 MTMR14Q8NCE2 650 aa22.09■■□□□ 1.13
NCSTN-208ENST00000438008 C1orf115Q9H7X2 142 aa22.09■■□□□ 1.13
NCSTN-208ENST00000438008 ZBTB22O15209 634 aa22.08■■□□□ 1.13
NCSTN-208ENST00000438008 SULF1Q8IWU6 871 aa22.08■■□□□ 1.13
NCSTN-208ENST00000438008 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.08■■□□□ 1.13
NCSTN-208ENST00000438008 TBC1D22AQ8WUA7 517 aa22.08■■□□□ 1.13
NCSTN-208ENST00000438008 IQSEC3Q9UPP2 1182 aaPredicted RBP22.08■■□□□ 1.13
NCSTN-208ENST00000438008 AKAP2Q9Y2D5 859 aa22.08■■□□□ 1.13
NCSTN-208ENST00000438008 CNTNAP1P78357 1384 aa22.08■■□□□ 1.12
NCSTN-208ENST00000438008 RASSF10A6NK89 507 aa22.07■■□□□ 1.12
NCSTN-208ENST00000438008 FRAT2O75474 233 aaPredicted RBP22.07■■□□□ 1.12
NCSTN-208ENST00000438008 CELF2O95319 508 aaKnown RBP22.07■■□□□ 1.12
NCSTN-208ENST00000438008 TFCP2Q12800 502 aa22.07■■□□□ 1.12
NCSTN-208ENST00000438008 G3BP1Q13283 466 aaKnown RBP eCLIP22.07■■□□□ 1.12
NCSTN-208ENST00000438008 PDE3AQ14432 1141 aa22.07■■□□□ 1.12
NCSTN-208ENST00000438008 DDX19BQ9UMR2 479 aa22.07■■□□□ 1.12
NCSTN-208ENST00000438008 ADM5C9JUS6 153 aa22.06■■□□□ 1.12
NCSTN-208ENST00000438008 MKRN1Q9UHC7 482 aaKnown RBP22.06■■□□□ 1.12
NCSTN-208ENST00000438008 COG6Q9Y2V7 657 aa22.06■■□□□ 1.12
NCSTN-208ENST00000438008 F8W031 263 aaPredicted RBP22.05■■□□□ 1.12
NCSTN-208ENST00000438008 CHAF1AQ13111 956 aaPredicted RBP22.05■■□□□ 1.12
NCSTN-208ENST00000438008 DLGAP5Q15398 846 aa22.05■■□□□ 1.12
NCSTN-208ENST00000438008 CEP85Q6P2H3 762 aa22.05■■□□□ 1.12
NCSTN-208ENST00000438008 DLK2Q6UY11 383 aa22.05■■□□□ 1.12
NCSTN-208ENST00000438008 GNL3LQ9NVN8 582 aaKnown RBP22.05■■□□□ 1.12
NCSTN-208ENST00000438008 ABT1Q9ULW3 272 aaKnown RBP22.05■■□□□ 1.12
NCSTN-208ENST00000438008 NOP58Q9Y2X3 529 aaKnown RBP22.05■■□□□ 1.12
NCSTN-208ENST00000438008 TLL2Q9Y6L7 1015 aa22.05■■□□□ 1.12
NCSTN-208ENST00000438008 TIMM10P62072 90 aa22.04■■□□□ 1.12
NCSTN-208ENST00000438008 DEFB115Q30KQ5 88 aa22.04■■□□□ 1.12
NCSTN-208ENST00000438008 CFAP100Q494V2 611 aa22.04■■□□□ 1.12
NCSTN-208ENST00000438008 CHMP4BQ9H444 224 aaKnown RBP22.04■■□□□ 1.12
NCSTN-208ENST00000438008 ZBTB40Q9NUA8 1239 aa22.04■■□□□ 1.12
NCSTN-208ENST00000438008 TTF2Q9UNY4 1162 aaKnown RBP22.04■■□□□ 1.12
NCSTN-208ENST00000438008 SUGT1Q9Y2Z0 365 aa22.04■■□□□ 1.12
NCSTN-208ENST00000438008 TRPM7Q96QT4 1865 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 A0A1B0GUL7 405 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 SPDYE2BA6NHP3 402 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 SEMA3EO15041 775 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 SPDYE6P0CI01 402 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 ADORA1P30542 326 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 WDR66Q8TBY9 1149 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
NCSTN-208ENST00000438008 SERPINA10Q9UK55 444 aa22.03■■□□□ 1.12
NCSTN-208ENST00000438008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.03■■□□□ 1.12
NCSTN-208ENST00000438008 SURF6O75683 361 aaKnown RBP22.02■■□□□ 1.12
NCSTN-208ENST00000438008 PHKA1P46020 1223 aa22.02■■□□□ 1.12
NCSTN-208ENST00000438008 HDLBPQ00341 1268 aaKnown RBP22.02■■□□□ 1.12
NCSTN-208ENST00000438008 CCDC102BQ68D86 513 aa22.02■■□□□ 1.12
NCSTN-208ENST00000438008 SAPCD2Q86UD0 394 aa22.02■■□□□ 1.12
NCSTN-208ENST00000438008 CDCA5Q96FF9 252 aa22.02■■□□□ 1.12
NCSTN-208ENST00000438008 ZNF408Q9H9D4 720 aa22.02■■□□□ 1.12
NCSTN-208ENST00000438008 GRIK5Q16478 980 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 C20orf194Q5TEA3 1177 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 APOBEC3FQ8IUX4 373 aaKnown RBP22.01■■□□□ 1.11
NCSTN-208ENST00000438008 XAGE2Q96GT9 111 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 HHIPL1Q96JK4 782 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 PRMT6Q96LA8 375 aaPredicted RBP22.01■■□□□ 1.11
NCSTN-208ENST00000438008 MRIQ9BWK5 157 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 GPR108Q9NPR9 543 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 DENND2AQ9ULE3 1009 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 PCDHAC2Q9Y5I4 1007 aa22.01■■□□□ 1.11
NCSTN-208ENST00000438008 POLR2AP24928 1970 aaKnown RBP22■■□□□ 1.11
NCSTN-208ENST00000438008 VEGFBP49765 207 aa22■■□□□ 1.11
NCSTN-208ENST00000438008 RPAP2Q8IXW5 612 aaPredicted RBP22■■□□□ 1.11
NCSTN-208ENST00000438008 COL1A1P02452 1464 aaPredicted RBP21.99■■□□□ 1.11
NCSTN-208ENST00000438008 MYO1BO43795 1136 aa21.99■■□□□ 1.11
NCSTN-208ENST00000438008 CRKP46108 304 aa21.99■■□□□ 1.11
NCSTN-208ENST00000438008 GBA2Q9HCG7 927 aaPredicted RBP21.99■■□□□ 1.11
NCSTN-208ENST00000438008 ARAP2Q8WZ64 1704 aa21.99■■□□□ 1.11
NCSTN-208ENST00000438008 RBM5P52756 815 aaKnown RBP eCLIP21.98■■□□□ 1.11
NCSTN-208ENST00000438008 OS9Q13438 667 aaPredicted RBP21.98■■□□□ 1.11
NCSTN-208ENST00000438008 C2orf69Q8N8R5 385 aa21.98■■□□□ 1.11
NCSTN-208ENST00000438008 NEUROD6Q96NK8 337 aa21.98■■□□□ 1.11
NCSTN-208ENST00000438008 SCAF8Q9UPN6 1271 aaKnown RBP21.98■■□□□ 1.11
NCSTN-208ENST00000438008 MAST3O60307 1309 aa21.98■■□□□ 1.11
NCSTN-208ENST00000438008 PDS5AQ29RF7 1337 aaKnown RBP21.98■■□□□ 1.11
NCSTN-208ENST00000438008 SALL1Q9NSC2 1324 aa21.98■■□□□ 1.11
NCSTN-208ENST00000438008 WDR33Q9C0J8 1336 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms