RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
CPNE1-214ENST00000435747 CCL15Q16663 113 aa13.56□□□□□ -0.24
CPNE1-214ENST00000435747 STRIP1Q5VSL9 837 aa13.56□□□□□ -0.24
CPNE1-214ENST00000435747 RAET1EQ8TD07 263 aa13.56□□□□□ -0.24
CPNE1-214ENST00000435747 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
CPNE1-214ENST00000435747 U2AF1L4Q8WU68 220 aaKnown RBP13.56□□□□□ -0.24
CPNE1-214ENST00000435747 ELP3Q9H9T3 547 aa13.56□□□□□ -0.24
CPNE1-214ENST00000435747 BIN2Q9UBW5 565 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-214ENST00000435747 TLR2O60603 784 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 USP2O75604 605 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-214ENST00000435747 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-214ENST00000435747 GTF2A2P52657 109 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 UBXN2AP68543 259 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-214ENST00000435747 FAM43AQ8N2R8 423 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 ZBED3Q96IU2 234 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-214ENST00000435747 TRIM47Q96LD4 638 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 PNNQ9H307 717 aaKnown RBP13.55□□□□□ -0.24
CPNE1-214ENST00000435747 PRKRIP1Q9H875 184 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-214ENST00000435747 SEC31BQ9NQW1 1179 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 RIPOR2Q9Y4F9 1068 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 NCOR1O75376 2440 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 MUC3AQ02505 3323 aa13.55□□□□□ -0.24
CPNE1-214ENST00000435747 LAMA2P24043 3122 aaKnown RBP13.55□□□□□ -0.24
CPNE1-214ENST00000435747 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-214ENST00000435747 HOXD10P28358 340 aa13.54□□□□□ -0.24
CPNE1-214ENST00000435747 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
CPNE1-214ENST00000435747 KIAA0825Q8IV33 1275 aa13.54□□□□□ -0.24
CPNE1-214ENST00000435747 TDHQ8IZJ6 230 aa13.54□□□□□ -0.24
CPNE1-214ENST00000435747 SRRDQ9UH36 339 aa13.54□□□□□ -0.24
CPNE1-214ENST00000435747 MAPK8IP3Q9UPT6 1336 aa13.54□□□□□ -0.24
CPNE1-214ENST00000435747 NEFMP07197 916 aa13.53□□□□□ -0.24
CPNE1-214ENST00000435747 PLA2G5P39877 138 aa13.53□□□□□ -0.24
CPNE1-214ENST00000435747 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
CPNE1-214ENST00000435747 NBPF12Q5TAG4 269 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-214ENST00000435747 ZNF804BA4D1E1 1349 aa13.53□□□□□ -0.24
CPNE1-214ENST00000435747 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
CPNE1-214ENST00000435747 SGPL1O95470 568 aa13.52□□□□□ -0.25
CPNE1-214ENST00000435747 RIPK4P57078 832 aa13.52□□□□□ -0.25
CPNE1-214ENST00000435747 FAM122AQ96E09 287 aa13.52□□□□□ -0.25
CPNE1-214ENST00000435747 ZMYND8Q9ULU4 1186 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-214ENST00000435747 IRS2Q9Y4H2 1338 aa13.52□□□□□ -0.25
CPNE1-214ENST00000435747 MYPNQ86TC9 1320 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 MYO1BO43795 1136 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 FMNL1O95466 1100 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-214ENST00000435747 OSBPP22059 807 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 PSMC4P43686 418 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 TTLL5Q6EMB2 1281 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 C7orf61Q8IZ16 206 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 GUCD1Q96NT3 240 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 ISCA1Q9BUE6 129 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 COA1Q9GZY4 146 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 UNC93B1Q9H1C4 597 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 VEZTQ9HBM0 779 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 RAPGEFL1Q9UHV5 662 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
CPNE1-214ENST00000435747 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
CPNE1-214ENST00000435747 TFRCP02786 760 aaKnown RBP13.5□□□□□ -0.25
CPNE1-214ENST00000435747 CAPN2P17655 700 aa13.5□□□□□ -0.25
CPNE1-214ENST00000435747 CCDC152Q4G0S7 254 aa13.5□□□□□ -0.25
CPNE1-214ENST00000435747 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
CPNE1-214ENST00000435747 HELBQ8NG08 1087 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-214ENST00000435747 SYMPKQ92797 1274 aaKnown RBP13.5□□□□□ -0.25
CPNE1-214ENST00000435747 ZCCHC17Q9NP64 241 aaKnown RBP13.5□□□□□ -0.25
CPNE1-214ENST00000435747 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
CPNE1-214ENST00000435747 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
CPNE1-214ENST00000435747 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
CPNE1-214ENST00000435747 CTGFP29279 349 aa13.49□□□□□ -0.25
CPNE1-214ENST00000435747 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-214ENST00000435747 CCDC146Q8IYE0 955 aa13.49□□□□□ -0.25
CPNE1-214ENST00000435747 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
CPNE1-214ENST00000435747 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
CPNE1-214ENST00000435747 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
CPNE1-214ENST00000435747 CHL1O00533 1208 aa13.48□□□□□ -0.25
CPNE1-214ENST00000435747 CETPP11597 493 aa13.48□□□□□ -0.25
CPNE1-214ENST00000435747 NECAB2Q7Z6G3 386 aa13.48□□□□□ -0.25
CPNE1-214ENST00000435747 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
CPNE1-214ENST00000435747 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
CPNE1-214ENST00000435747 PAWRQ96IZ0 340 aaKnown RBP13.48□□□□□ -0.25
CPNE1-214ENST00000435747 FAM161BQ96MY7 647 aa13.48□□□□□ -0.25
CPNE1-214ENST00000435747 BTBD19C9JJ37 291 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 SYN1P17600 705 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 GTF2IP78347 998 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 LMOD3Q0VAK6 560 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 VGLL4Q14135 290 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 RASA3Q14644 834 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 FAM109BQ6ICB4 259 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-214ENST00000435747 C17orf99Q6UX52 265 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-214ENST00000435747 DEFB118Q96PH6 123 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-214ENST00000435747 CPA4Q9UI42 421 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 CSADQ9Y600 493 aa13.47□□□□□ -0.25
CPNE1-214ENST00000435747 MGAMO43451 1857 aa13.46□□□□□ -0.25
CPNE1-214ENST00000435747 SPEF2Q9C093 1822 aa13.46□□□□□ -0.25
CPNE1-214ENST00000435747 PIEZO1Q92508 2521 aa13.46□□□□□ -0.25
CPNE1-214ENST00000435747 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms