RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 KIAA0825Q8IV33 1275 aa20.18■□□□□ 0.82
SMPD4-207ENST00000435455 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
SMPD4-207ENST00000435455 ARAP2Q8WZ64 1704 aa20.17■□□□□ 0.82
SMPD4-207ENST00000435455 PNMA6EA0A0J9YXQ4 647 aa20.17■□□□□ 0.82
SMPD4-207ENST00000435455 TRAF5O00463 557 aa20.17■□□□□ 0.82
SMPD4-207ENST00000435455 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
SMPD4-207ENST00000435455 KRT26Q7Z3Y9 468 aa20.17■□□□□ 0.82
SMPD4-207ENST00000435455 CERS5Q8N5B7 392 aa20.17■□□□□ 0.82
SMPD4-207ENST00000435455 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
SMPD4-207ENST00000435455 MYH13Q9UKX3 1938 aa20.17■□□□□ 0.82
SMPD4-207ENST00000435455 BCAMP50895 628 aa20.16■□□□□ 0.82
SMPD4-207ENST00000435455 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
SMPD4-207ENST00000435455 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
SMPD4-207ENST00000435455 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
SMPD4-207ENST00000435455 FMR1Q06787 632 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMPD4-207ENST00000435455 G3BP1Q13283 466 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMPD4-207ENST00000435455 POLA2Q14181 598 aa20.15■□□□□ 0.82
SMPD4-207ENST00000435455 MVPQ14764 893 aaKnown RBP20.15■□□□□ 0.82
SMPD4-207ENST00000435455 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
SMPD4-207ENST00000435455 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
SMPD4-207ENST00000435455 JAG2Q9Y219 1238 aa20.15■□□□□ 0.82
SMPD4-207ENST00000435455 AKAP2Q9Y2D5 859 aa20.15■□□□□ 0.82
SMPD4-207ENST00000435455 ASTN2O75129 1339 aaPredicted RBP20.14■□□□□ 0.81
SMPD4-207ENST00000435455 ANGEL2Q5VTE6 544 aaKnown RBP20.14■□□□□ 0.81
SMPD4-207ENST00000435455 SSH3Q8TE77 659 aa20.14■□□□□ 0.81
SMPD4-207ENST00000435455 TBC1D22AQ8WUA7 517 aa20.14■□□□□ 0.81
SMPD4-207ENST00000435455 C1orf115Q9H7X2 142 aa20.14■□□□□ 0.81
SMPD4-207ENST00000435455 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.81
SMPD4-207ENST00000435455 IQSEC3Q9UPP2 1182 aaPredicted RBP20.14■□□□□ 0.81
SMPD4-207ENST00000435455 CNTNAP1P78357 1384 aa20.13■□□□□ 0.81
SMPD4-207ENST00000435455 WNT10BO00744 389 aa20.13■□□□□ 0.81
SMPD4-207ENST00000435455 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
SMPD4-207ENST00000435455 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
SMPD4-207ENST00000435455 DLGAP5Q15398 846 aa20.13■□□□□ 0.81
SMPD4-207ENST00000435455 NBPF9Q3BBW0 867 aa20.13■□□□□ 0.81
SMPD4-207ENST00000435455 CST9Q5W186 159 aa20.13■□□□□ 0.81
SMPD4-207ENST00000435455 MTMR14Q8NCE2 650 aa20.13■□□□□ 0.81
SMPD4-207ENST00000435455 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
SMPD4-207ENST00000435455 CHMP4BQ9H444 224 aaKnown RBP20.13■□□□□ 0.81
SMPD4-207ENST00000435455 GNL3LQ9NVN8 582 aaKnown RBP20.13■□□□□ 0.81
SMPD4-207ENST00000435455 ABT1Q9ULW3 272 aaKnown RBP20.13■□□□□ 0.81
SMPD4-207ENST00000435455 ECM29Q5VYK3 1845 aa20.12■□□□□ 0.81
SMPD4-207ENST00000435455 F8W031 263 aaPredicted RBP20.12■□□□□ 0.81
SMPD4-207ENST00000435455 TFCP2Q12800 502 aa20.12■□□□□ 0.81
SMPD4-207ENST00000435455 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
SMPD4-207ENST00000435455 ZBED3Q96IU2 234 aaPredicted RBP20.12■□□□□ 0.81
SMPD4-207ENST00000435455 ADM5C9JUS6 153 aa20.11■□□□□ 0.81
SMPD4-207ENST00000435455 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
SMPD4-207ENST00000435455 ZNF408Q9H9D4 720 aa20.11■□□□□ 0.81
SMPD4-207ENST00000435455 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
SMPD4-207ENST00000435455 COG6Q9Y2V7 657 aa20.11■□□□□ 0.81
SMPD4-207ENST00000435455 RASSF10A6NK89 507 aa20.1■□□□□ 0.81
SMPD4-207ENST00000435455 DEFB115Q30KQ5 88 aa20.1■□□□□ 0.81
SMPD4-207ENST00000435455 TTF2Q9UNY4 1162 aaKnown RBP20.1■□□□□ 0.81
SMPD4-207ENST00000435455 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 ZBTB22O15209 634 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 TIMM10P62072 90 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 OS9Q13438 667 aaPredicted RBP20.09■□□□□ 0.81
SMPD4-207ENST00000435455 CFAP100Q494V2 611 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 CEP85Q6P2H3 762 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 APOBEC3FQ8IUX4 373 aaKnown RBP20.09■□□□□ 0.81
SMPD4-207ENST00000435455 WDR66Q8TBY9 1149 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 SERPINA10Q9UK55 444 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 SUGT1Q9Y2Z0 365 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 TLL2Q9Y6L7 1015 aa20.09■□□□□ 0.81
SMPD4-207ENST00000435455 SEMA3EO15041 775 aa20.08■□□□□ 0.81
SMPD4-207ENST00000435455 SURF6O75683 361 aaKnown RBP20.08■□□□□ 0.81
SMPD4-207ENST00000435455 PHKA1P46020 1223 aa20.08■□□□□ 0.81
SMPD4-207ENST00000435455 RBM5P52756 815 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMPD4-207ENST00000435455 ZBTB40Q9NUA8 1239 aa20.08■□□□□ 0.81
SMPD4-207ENST00000435455 NOP58Q9Y2X3 529 aaKnown RBP20.08■□□□□ 0.81
SMPD4-207ENST00000435455 MAST3O60307 1309 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 SPDYE2BA6NHP3 402 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 MYO1BO43795 1136 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 SPDYE6P0CI01 402 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 ADORA1P30542 326 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
SMPD4-207ENST00000435455 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 DLK2Q6UY11 383 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 C2orf69Q8N8R5 385 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 CDCA5Q96FF9 252 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 XAGE2Q96GT9 111 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 DENND2AQ9ULE3 1009 aa20.07■□□□□ 0.8
SMPD4-207ENST00000435455 GORABQ5T7V8 394 aa20.06■□□□□ 0.8
SMPD4-207ENST00000435455 SAPCD2Q86UD0 394 aa20.06■□□□□ 0.8
SMPD4-207ENST00000435455 HHIPL1Q96JK4 782 aa20.06■□□□□ 0.8
SMPD4-207ENST00000435455 GBA2Q9HCG7 927 aaPredicted RBP20.06■□□□□ 0.8
SMPD4-207ENST00000435455 GPR108Q9NPR9 543 aa20.06■□□□□ 0.8
SMPD4-207ENST00000435455 PCNTO95613 3336 aa20.06■□□□□ 0.8
SMPD4-207ENST00000435455 VEGFBP49765 207 aa20.05■□□□□ 0.8
SMPD4-207ENST00000435455 C20orf194Q5TEA3 1177 aa20.05■□□□□ 0.8
SMPD4-207ENST00000435455 RPAP2Q8IXW5 612 aaPredicted RBP20.05■□□□□ 0.8
SMPD4-207ENST00000435455 MRIQ9BWK5 157 aa20.05■□□□□ 0.8
SMPD4-207ENST00000435455 COL1A1P02452 1464 aaPredicted RBP20.05■□□□□ 0.8
SMPD4-207ENST00000435455 PDS5AQ29RF7 1337 aaKnown RBP20.04■□□□□ 0.8
SMPD4-207ENST00000435455 HMMRO75330 724 aa20.04■□□□□ 0.8
SMPD4-207ENST00000435455 ECE1P42892 770 aa20.04■□□□□ 0.8
SMPD4-207ENST00000435455 CRKP46108 304 aa20.04■□□□□ 0.8
SMPD4-207ENST00000435455 GRIK5Q16478 980 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms