RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ANKZF1Q9H8Y5 726 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 A0A087WUV0 522 aaPredicted RBP8.56□□□□□ -1.04
CPSF6-202ENST00000435070 FMR1NBQ8N0W7 255 aaPredicted RBP8.56□□□□□ -1.04
CPSF6-202ENST00000435070 GJB4Q9NTQ9 266 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 MARCH6O60337 910 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 PPFIA4O75335 1185 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 HNRNPH1P31943 449 aaKnown RBP8.56□□□□□ -1.04
CPSF6-202ENST00000435070 ATP2B2Q01814 1243 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 NUTM2GQ5VZR2 741 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 YTHDC2Q9H6S0 1430 aaKnown RBP8.56□□□□□ -1.04
CPSF6-202ENST00000435070 PTPDC1A2A3K4 754 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 ARHGAP6O43182 974 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 RNF40O75150 1001 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 PPARDQ03181 441 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 ZNF569Q5MCW4 686 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 SMARCC1Q92922 1105 aaPredicted RBP8.56□□□□□ -1.04
CPSF6-202ENST00000435070 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 SAMM50Q9Y512 469 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 FANCAO15360 1455 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 ZMYND10O75800 440 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 NEK1Q96PY6 1258 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 MRPL44Q9H9J2 332 aaKnown RBP8.56□□□□□ -1.04
CPSF6-202ENST00000435070 CD163L1Q9NR16 1453 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 ZFYVE9O95405 1425 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 LRRIQ3A6PVS8 624 aaPredicted RBP8.55□□□□□ -1.04
CPSF6-202ENST00000435070 RAD21O60216 631 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 SRGAP1Q7Z6B7 1085 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 GPATCH3Q96I76 525 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 DONSONQ9NYP3 566 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 CLIC4Q9Y696 253 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 EXOC5O00471 708 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 CUTAO60888 179 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 ZNF202O95125 648 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 SCP2P22307 547 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 LTV1Q96GA3 475 aaPredicted RBP8.55□□□□□ -1.04
CPSF6-202ENST00000435070 CENPHQ9H3R5 247 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 POLD4Q9HCU8 107 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 TEFQ10587 303 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 MTHFSDQ2M296 383 aaKnown RBP8.55□□□□□ -1.04
CPSF6-202ENST00000435070 AFAP1L1Q8TED9 768 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 EVI5LQ96CN4 794 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 ADGRB1O14514 1584 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 MRC2Q9UBG0 1479 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 VWDEQ8N2E2 1590 aa8.55□□□□□ -1.04
CPSF6-202ENST00000435070 NLRP12P59046 1061 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 LONRF3Q496Y0 759 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 SUGP1Q8IWZ8 645 aaKnown RBP8.54□□□□□ -1.04
CPSF6-202ENST00000435070 CPSF1Q10570 1443 aaKnown RBP8.54□□□□□ -1.04
CPSF6-202ENST00000435070 GIMAP7Q8NHV1 300 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 FAM169AQ9Y6X4 670 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 ABCC3O15438 1527 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 KCNJ6P48051 423 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 KIFC2Q96AC6 838 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 SLC24A3Q9HC58 644 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
CPSF6-202ENST00000435070 USP32Q8NFA0 1604 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 SOWAHDA6NJG2 315 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 EBAG9O00559 213 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
CPSF6-202ENST00000435070 FKBP15Q5T1M5 1219 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 GBP6Q6ZN66 633 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
CPSF6-202ENST00000435070 NOA1Q8NC60 698 aaKnown RBP8.54□□□□□ -1.04
CPSF6-202ENST00000435070 FAM71BQ8TC56 605 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.54□□□□□ -1.04
CPSF6-202ENST00000435070 CAPN7Q9Y6W3 813 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 CEP89Q96ST8 783 aa8.54□□□□□ -1.04
CPSF6-202ENST00000435070 PI4KAP2A4QPH2 592 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 EIF5P55010 431 aaKnown RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 PNOCQ13519 176 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 VSTM4Q8IW00 320 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 GSPT2Q8IYD1 628 aaKnown RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 PI4KAP1Q8N8J0 262 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 CDK12Q9NYV4 1490 aaPredicted RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 FRMD3A2A2Y4 597 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 MYL5Q02045 173 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 IGSF22Q8N9C0 903 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 CNKSR2Q8WXI2 1034 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 CDC5LQ99459 802 aaKnown RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 MYO3AQ8NEV4 1616 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 PDE6BP35913 854 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 SWT1Q5T5J6 900 aaKnown RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 KCNV1Q6PIU1 500 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 NRXN1Q9ULB1 1477 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 MYO1FO00160 1098 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 KIF5CO60282 957 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 INPP5BP32019 993 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 BCAS4Q8TDM0 211 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 C9orf78Q9NZ63 289 aaPredicted RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 KIF1BO60333 1816 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 GSCP56915 257 aaPredicted RBP8.53□□□□□ -1.04
CPSF6-202ENST00000435070 EVA1CP58658 441 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 HSP90AB3PQ58FF7 597 aa8.53□□□□□ -1.04
CPSF6-202ENST00000435070 CPLX2Q6PUV4 134 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms