RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 PDIA3P30101 505 aaKnown RBP28.06■■■□□ 2.08
MBD3-202ENST00000434436 RNF214Q8ND24 703 aa28.06■■■□□ 2.08
MBD3-202ENST00000434436 MPHOSPH8Q99549 860 aa28.06■■■□□ 2.08
MBD3-202ENST00000434436 IDH1O75874 414 aaKnown RBP28.05■■■□□ 2.08
MBD3-202ENST00000434436 CCT2P78371 535 aaKnown RBP28.05■■■□□ 2.08
MBD3-202ENST00000434436 UBE3CQ15386 1083 aa28.05■■■□□ 2.08
MBD3-202ENST00000434436 CCDC152Q4G0S7 254 aa28.05■■■□□ 2.08
MBD3-202ENST00000434436 ZNF274Q96GC6 653 aaPredicted RBP28.05■■■□□ 2.08
MBD3-202ENST00000434436 SLC5A1P13866 664 aa28.04■■■□□ 2.08
MBD3-202ENST00000434436 RESTQ13127 1097 aa28.04■■■□□ 2.08
MBD3-202ENST00000434436 GPHNQ9NQX3 736 aaPredicted RBP28.04■■■□□ 2.08
MBD3-202ENST00000434436 ELP1O95163 1332 aa28.04■■■□□ 2.08
MBD3-202ENST00000434436 ZNF831Q5JPB2 1677 aa28.04■■■□□ 2.08
MBD3-202ENST00000434436 RTL9Q8NET4 1388 aa28.04■■■□□ 2.08
MBD3-202ENST00000434436 NCOA5Q9HCD5 579 aaKnown RBP28.04■■■□□ 2.08
MBD3-202ENST00000434436 WWC3Q9ULE0 1092 aa28.04■■■□□ 2.08
MBD3-202ENST00000434436 ZNF532Q9HCE3 1301 aa28.04■■■□□ 2.08
MBD3-202ENST00000434436 MB21D2Q8IYB1 491 aaPredicted RBP28.03■■■□□ 2.08
MBD3-202ENST00000434436 LINC00116Q8NCU8 138 aa28.03■■■□□ 2.08
MBD3-202ENST00000434436 PDLIM2Q96JY6 352 aa28.03■■■□□ 2.08
MBD3-202ENST00000434436 TCRBV5S4A2TA0A5A2 114 aa28.03■■■□□ 2.08
MBD3-202ENST00000434436 PTPDC1A2A3K4 754 aa28.03■■■□□ 2.08
MBD3-202ENST00000434436 PDE6AP16499 860 aa28.03■■■□□ 2.08
MBD3-202ENST00000434436 EVCP57679 992 aa28.03■■■□□ 2.08
MBD3-202ENST00000434436 FAM184AQ8NB25 1140 aa28.03■■■□□ 2.08
MBD3-202ENST00000434436 TFIP11Q9UBB9 837 aaKnown RBP28.02■■■□□ 2.08
MBD3-202ENST00000434436 DOCK2Q92608 1830 aa28.02■■■□□ 2.08
MBD3-202ENST00000434436 COL4A1P02462 1669 aa28.02■■■□□ 2.08
MBD3-202ENST00000434436 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
MBD3-202ENST00000434436 SALL1Q9NSC2 1324 aa28.02■■■□□ 2.08
MBD3-202ENST00000434436 ESPNB1AK53 854 aa28.02■■■□□ 2.08
MBD3-202ENST00000434436 ZNF213O14771 459 aa28.01■■■□□ 2.07
MBD3-202ENST00000434436 LETM1O95202 739 aaPredicted RBP28.01■■■□□ 2.07
MBD3-202ENST00000434436 SPATA5Q8NB90 893 aa28.01■■■□□ 2.07
MBD3-202ENST00000434436 NAP1L2Q9ULW6 460 aaPredicted RBP28.01■■■□□ 2.07
MBD3-202ENST00000434436 H3BQV1 296 aa28.01■■■□□ 2.07
MBD3-202ENST00000434436 RASGRF1Q13972 1273 aa28.01■■■□□ 2.07
MBD3-202ENST00000434436 IFFO2Q5TF58 517 aa28.01■■■□□ 2.07
MBD3-202ENST00000434436 NBPF3Q9H094 633 aa28.01■■■□□ 2.07
MBD3-202ENST00000434436 ANTXR2P58335 489 aa28■■■□□ 2.07
MBD3-202ENST00000434436 HMGN5P82970 282 aaKnown RBP28■■■□□ 2.07
MBD3-202ENST00000434436 SCAND2PQ9GZW5 306 aaPredicted RBP28■■■□□ 2.07
MBD3-202ENST00000434436 ZNF652Q9Y2D9 606 aa28■■■□□ 2.07
MBD3-202ENST00000434436 PRC1O43663 620 aa28■■■□□ 2.07
MBD3-202ENST00000434436 IGHMBP2P38935 993 aaKnown RBP28■■■□□ 2.07
MBD3-202ENST00000434436 KCNQ4P56696 695 aa28■■■□□ 2.07
MBD3-202ENST00000434436 VPS72Q15906 364 aa28■■■□□ 2.07
MBD3-202ENST00000434436 C8orf37Q96NL8 207 aa28■■■□□ 2.07
MBD3-202ENST00000434436 MCM5P33992 734 aa27.99■■■□□ 2.07
MBD3-202ENST00000434436 NCOA7Q8NI08 942 aa27.99■■■□□ 2.07
MBD3-202ENST00000434436 CLEC4GQ6UXB4 293 aa27.99■■■□□ 2.07
MBD3-202ENST00000434436 LEO1Q8WVC0 666 aaPredicted RBP27.99■■■□□ 2.07
MBD3-202ENST00000434436 PTF1AQ7RTS3 328 aa27.98■■■□□ 2.07
MBD3-202ENST00000434436 NGLY1Q96IV0 654 aa27.98■■■□□ 2.07
MBD3-202ENST00000434436 SPATA32Q96LK8 384 aa27.98■■■□□ 2.07
MBD3-202ENST00000434436 MYH15Q9Y2K3 1946 aa27.98■■■□□ 2.07
MBD3-202ENST00000434436 ZSCAN16Q9H4T2 348 aaPredicted RBP27.98■■■□□ 2.07
MBD3-202ENST00000434436 NAA16Q6N069 864 aaPredicted RBP27.97■■■□□ 2.07
MBD3-202ENST00000434436 CLCN1P35523 988 aa27.97■■■□□ 2.07
MBD3-202ENST00000434436 STRBPQ96SI9 672 aaKnown RBP27.97■■■□□ 2.07
MBD3-202ENST00000434436 CASZ1Q86V15 1759 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 PPFIA3O75145 1194 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 BCAMP50895 628 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 FOSBP53539 338 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 CHRNDQ07001 517 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 GIMAP6Q6P9H5 292 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 RALYLQ86SE5 291 aaKnown RBP27.96■■■□□ 2.07
MBD3-202ENST00000434436 FUCA2Q9BTY2 467 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 DENND2AQ9ULE3 1009 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 LIG1P18858 919 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 ERFEQ4G0M1 354 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 TBC1D10CQ8IV04 446 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 NKX2-3Q8TAU0 364 aa27.96■■■□□ 2.07
MBD3-202ENST00000434436 C3orf67Q6ZVT6 689 aa27.95■■■□□ 2.06
MBD3-202ENST00000434436 KIF3AQ9Y496 699 aa27.94■■■□□ 2.06
MBD3-202ENST00000434436 TAF1P21675 1872 aa27.94■■■□□ 2.06
MBD3-202ENST00000434436 WDR19Q8NEZ3 1342 aa27.94■■■□□ 2.06
MBD3-202ENST00000434436 APPP05067 770 aa27.94■■■□□ 2.06
MBD3-202ENST00000434436 FDPSP14324 419 aaKnown RBP27.94■■■□□ 2.06
MBD3-202ENST00000434436 SMIM5Q71RC9 77 aa27.94■■■□□ 2.06
MBD3-202ENST00000434436 MAGEB6Q8N7X4 407 aa27.94■■■□□ 2.06
MBD3-202ENST00000434436 HPS5Q9UPZ3 1129 aa27.94■■■□□ 2.06
MBD3-202ENST00000434436 AIDAQ96BJ3 306 aa27.93■■■□□ 2.06
MBD3-202ENST00000434436 KLF18A0A0U1RQI7 1052 aa27.93■■■□□ 2.06
MBD3-202ENST00000434436 ADD1P35611 737 aaKnown RBP27.93■■■□□ 2.06
MBD3-202ENST00000434436 MAP3K12Q12852 859 aa27.93■■■□□ 2.06
MBD3-202ENST00000434436 CHMP4CQ96CF2 233 aa27.93■■■□□ 2.06
MBD3-202ENST00000434436 CNTNAP4Q9C0A0 1308 aa27.93■■■□□ 2.06
MBD3-202ENST00000434436 CARMIL3Q8ND23 1372 aa27.93■■■□□ 2.06
MBD3-202ENST00000434436 A0A1B0GUL6 1792 aa27.92■■■□□ 2.06
MBD3-202ENST00000434436 KLHL34Q8N239 644 aa27.92■■■□□ 2.06
MBD3-202ENST00000434436 PGBD1Q96JS3 809 aa27.92■■■□□ 2.06
MBD3-202ENST00000434436 UBAP1LF5GYI3 381 aa27.91■■■□□ 2.06
MBD3-202ENST00000434436 CDC5LQ99459 802 aaKnown RBP27.91■■■□□ 2.06
MBD3-202ENST00000434436 SCN7AQ01118 1682 aa27.91■■■□□ 2.06
MBD3-202ENST00000434436 ALX1Q15699 326 aa27.91■■■□□ 2.06
MBD3-202ENST00000434436 CYB5R4Q7L1T6 521 aa27.91■■■□□ 2.06
MBD3-202ENST00000434436 GOLGA8BA8MQT2 603 aa27.9■■■□□ 2.06
MBD3-202ENST00000434436 SF3B3Q15393 1217 aaKnown RBP27.9■■■□□ 2.06
MBD3-202ENST00000434436 BCL2L12Q9HB09 334 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms