RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TFCP2Q12800 502 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 TRPM4Q8TD43 1214 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 MXD3Q9BW11 206 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 PGAP2Q9UHJ9 254 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.76■■□□□ 1.23
HLA-F-220ENST00000434407 SIRT2Q8IXJ6 389 aa22.75■■□□□ 1.23
HLA-F-220ENST00000434407 EGFRP00533 1210 aa22.74■■□□□ 1.23
HLA-F-220ENST00000434407 USP17L8P0C7I0 530 aa22.74■■□□□ 1.23
HLA-F-220ENST00000434407 SAMD7Q7Z3H4 446 aa22.74■■□□□ 1.23
HLA-F-220ENST00000434407 VPS37DQ86XT2 251 aa22.74■■□□□ 1.23
HLA-F-220ENST00000434407 CERS5Q8N5B7 392 aa22.74■■□□□ 1.23
HLA-F-220ENST00000434407 ZC3H15Q8WU90 426 aaKnown RBP22.74■■□□□ 1.23
HLA-F-220ENST00000434407 AKAP2Q9Y2D5 859 aa22.74■■□□□ 1.23
HLA-F-220ENST00000434407 CEP350Q5VT06 3117 aa22.73■■□□□ 1.23
HLA-F-220ENST00000434407 SURF6O75683 361 aaKnown RBP22.73■■□□□ 1.23
HLA-F-220ENST00000434407 FBXW7Q969H0 707 aa22.73■■□□□ 1.23
HLA-F-220ENST00000434407 ITGBL1O95965 494 aaPredicted RBP22.72■■□□□ 1.23
HLA-F-220ENST00000434407 HSPA6P17066 643 aa22.72■■□□□ 1.23
HLA-F-220ENST00000434407 TIMM10P62072 90 aa22.72■■□□□ 1.23
HLA-F-220ENST00000434407 GPR108Q9NPR9 543 aa22.72■■□□□ 1.23
HLA-F-220ENST00000434407 CLEC11AQ9Y240 323 aa22.72■■□□□ 1.23
HLA-F-220ENST00000434407 A0A1B0GUL7 405 aa22.71■■□□□ 1.23
HLA-F-220ENST00000434407 TBC1D10BQ4KMP7 808 aaPredicted RBP22.71■■□□□ 1.23
HLA-F-220ENST00000434407 ADORA1P30542 326 aa22.7■■□□□ 1.22
HLA-F-220ENST00000434407 KIF4BQ2VIQ3 1234 aa22.7■■□□□ 1.22
HLA-F-220ENST00000434407 MAP1SQ66K74 1059 aaPredicted RBP22.7■■□□□ 1.22
HLA-F-220ENST00000434407 CNTROBQ8N137 903 aa22.7■■□□□ 1.22
HLA-F-220ENST00000434407 MYOZ2Q9NPC6 264 aa22.7■■□□□ 1.22
HLA-F-220ENST00000434407 IQSEC3Q9UPP2 1182 aaPredicted RBP22.7■■□□□ 1.22
HLA-F-220ENST00000434407 PASKQ96RG2 1323 aa22.7■■□□□ 1.22
HLA-F-220ENST00000434407 HMMRO75330 724 aa22.69■■□□□ 1.22
HLA-F-220ENST00000434407 OGFOD1Q8N543 542 aa22.69■■□□□ 1.22
HLA-F-220ENST00000434407 XAGE2Q96GT9 111 aa22.69■■□□□ 1.22
HLA-F-220ENST00000434407 JAG2Q9Y219 1238 aa22.69■■□□□ 1.22
HLA-F-220ENST00000434407 PHKA1P46020 1223 aa22.68■■□□□ 1.22
HLA-F-220ENST00000434407 MFSD14BQ5SR56 506 aa22.68■■□□□ 1.22
HLA-F-220ENST00000434407 CCDC102BQ68D86 513 aa22.68■■□□□ 1.22
HLA-F-220ENST00000434407 KIAA0825Q8IV33 1275 aa22.68■■□□□ 1.22
HLA-F-220ENST00000434407 TBC1D22AQ8WUA7 517 aa22.68■■□□□ 1.22
HLA-F-220ENST00000434407 COL1A1P02452 1464 aaPredicted RBP22.67■■□□□ 1.22
HLA-F-220ENST00000434407 TRPM7Q96QT4 1865 aa22.67■■□□□ 1.22
HLA-F-220ENST00000434407 SEMA3EO15041 775 aa22.67■■□□□ 1.22
HLA-F-220ENST00000434407 OS9Q13438 667 aaPredicted RBP22.67■■□□□ 1.22
HLA-F-220ENST00000434407 HSP90AB4PQ58FF6 505 aa22.67■■□□□ 1.22
HLA-F-220ENST00000434407 RBM26Q5T8P6 1007 aaKnown RBP22.67■■□□□ 1.22
HLA-F-220ENST00000434407 ZBED3Q96IU2 234 aaPredicted RBP22.67■■□□□ 1.22
HLA-F-220ENST00000434407 GNL3LQ9NVN8 582 aaKnown RBP22.67■■□□□ 1.22
HLA-F-220ENST00000434407 EXOC6BQ9Y2D4 811 aa22.67■■□□□ 1.22
HLA-F-220ENST00000434407 FRAT2O75474 233 aaPredicted RBP22.66■■□□□ 1.22
HLA-F-220ENST00000434407 TNNI3KQ59H18 835 aa22.66■■□□□ 1.22
HLA-F-220ENST00000434407 ERC1Q8IUD2 1116 aa22.66■■□□□ 1.22
HLA-F-220ENST00000434407 MTMR14Q8NCE2 650 aa22.66■■□□□ 1.22
HLA-F-220ENST00000434407 HDAC9Q9UKV0 1011 aa22.66■■□□□ 1.22
HLA-F-220ENST00000434407 FPGT-TNNI3KV9GXZ4 949 aa22.66■■□□□ 1.22
HLA-F-220ENST00000434407 APLP1P51693 650 aa22.65■■□□□ 1.22
HLA-F-220ENST00000434407 CHAF1AQ13111 956 aaPredicted RBP22.65■■□□□ 1.22
HLA-F-220ENST00000434407 CRBNQ96SW2 442 aa22.65■■□□□ 1.22
HLA-F-220ENST00000434407 SUGT1Q9Y2Z0 365 aa22.65■■□□□ 1.22
HLA-F-220ENST00000434407 ECM29Q5VYK3 1845 aa22.65■■□□□ 1.22
HLA-F-220ENST00000434407 PDS5AQ29RF7 1337 aaKnown RBP22.64■■□□□ 1.22
HLA-F-220ENST00000434407 SCARF1Q14162 830 aa22.64■■□□□ 1.21
HLA-F-220ENST00000434407 WDR66Q8TBY9 1149 aa22.64■■□□□ 1.21
HLA-F-220ENST00000434407 NEUROD6Q96NK8 337 aa22.64■■□□□ 1.21
HLA-F-220ENST00000434407 DENND2AQ9ULE3 1009 aa22.64■■□□□ 1.21
HLA-F-220ENST00000434407 AKAP11Q9UKA4 1901 aa22.64■■□□□ 1.21
HLA-F-220ENST00000434407 WNT10BO00744 389 aa22.63■■□□□ 1.21
HLA-F-220ENST00000434407 GRIK5Q16478 980 aa22.63■■□□□ 1.21
HLA-F-220ENST00000434407 ASTN2O75129 1339 aaPredicted RBP22.62■■□□□ 1.21
HLA-F-220ENST00000434407 PITPNM2Q9BZ72 1349 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 SALL1Q9NSC2 1324 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 ARID4AP29374 1257 aaPredicted RBP22.62■■□□□ 1.21
HLA-F-220ENST00000434407 RASGRF1Q13972 1273 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 NBPF9Q3BBW0 867 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 CDC37L1Q7L3B6 337 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 RHPN1Q8TCX5 695 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 EAF2Q96CJ1 260 aaPredicted RBP22.62■■□□□ 1.21
HLA-F-220ENST00000434407 MRIQ9BWK5 157 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 SERPINA10Q9UK55 444 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
HLA-F-220ENST00000434407 F8W031 263 aaPredicted RBP22.61■■□□□ 1.21
HLA-F-220ENST00000434407 RAB11FIP3O75154 756 aa22.61■■□□□ 1.21
HLA-F-220ENST00000434407 KIF1BPQ96EK5 621 aa22.61■■□□□ 1.21
HLA-F-220ENST00000434407 GLIS2Q9BZE0 524 aaPredicted RBP22.61■■□□□ 1.21
HLA-F-220ENST00000434407 GGA3Q9NZ52 723 aa22.61■■□□□ 1.21
HLA-F-220ENST00000434407 TTF2Q9UNY4 1162 aaKnown RBP22.61■■□□□ 1.21
HLA-F-220ENST00000434407 SUPT16HQ9Y5B9 1047 aaKnown RBP22.61■■□□□ 1.21
HLA-F-220ENST00000434407 HDLBPQ00341 1268 aaKnown RBP22.6■■□□□ 1.21
HLA-F-220ENST00000434407 AAMPQ13685 434 aa22.6■■□□□ 1.21
HLA-F-220ENST00000434407 DCPSQ96C86 337 aaKnown RBP22.6■■□□□ 1.21
HLA-F-220ENST00000434407 DBNDD2Q9BQY9 259 aa22.6■■□□□ 1.21
HLA-F-220ENST00000434407 DBNLQ9UJU6 430 aaKnown RBP22.6■■□□□ 1.21
HLA-F-220ENST00000434407 TRAF5O00463 557 aa22.59■■□□□ 1.21
HLA-F-220ENST00000434407 DLGAP5Q15398 846 aa22.59■■□□□ 1.21
HLA-F-220ENST00000434407 CFAP100Q494V2 611 aa22.59■■□□□ 1.21
HLA-F-220ENST00000434407 GORABQ5T7V8 394 aa22.59■■□□□ 1.21
HLA-F-220ENST00000434407 ANGEL2Q5VTE6 544 aaKnown RBP22.59■■□□□ 1.21
HLA-F-220ENST00000434407 KRT26Q7Z3Y9 468 aa22.59■■□□□ 1.21
HLA-F-220ENST00000434407 ZNF512BQ96KM6 892 aaPredicted RBP22.59■■□□□ 1.21
HLA-F-220ENST00000434407 SPDYE2BA6NHP3 402 aa22.58■■□□□ 1.21
HLA-F-220ENST00000434407 UQCRFS1P1P0C7P4 283 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms