RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 SLC5A1P13866 664 aa16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 ANGEL2Q5VTE6 544 aaKnown RBP16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 FBXO33Q7Z6M2 555 aa16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 DZIP1LQ8IYY4 767 aaKnown RBP16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 SIL1Q9H173 461 aa16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 CEP126Q9P2H0 1117 aa16.44■□□□□ 0.22
TRAPPC4-202ENST00000434101 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 SRGAP3O43295 1099 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 FGFR2P21802 821 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 IL15P40933 162 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 ECE1P42892 770 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 VEGFBP49765 207 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 MTX1Q13505 466 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 CERS5Q8N5B7 392 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 LPIN2Q92539 896 aa16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 ASTN2O75129 1339 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC4-202ENST00000434101 WNT10BO00744 389 aa16.42■□□□□ 0.22
TRAPPC4-202ENST00000434101 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
TRAPPC4-202ENST00000434101 MFSD14BQ5SR56 506 aa16.42■□□□□ 0.22
TRAPPC4-202ENST00000434101 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC4-202ENST00000434101 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
TRAPPC4-202ENST00000434101 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
TRAPPC4-202ENST00000434101 MS4A1P11836 297 aa16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 MTMR14Q8NCE2 650 aa16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 HHIPL1Q96JK4 782 aa16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 PA2G4Q9UQ80 394 aaKnown RBP16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
TRAPPC4-202ENST00000434101 F8W031 263 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 BCAMP50895 628 aa16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 C2orf69Q8N8R5 385 aa16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 ZBED3Q96IU2 234 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 CAPNS2Q96L46 248 aa16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 GBA2Q9HCG7 927 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC4-202ENST00000434101 MYO1BO43795 1136 aa16.39■□□□□ 0.21
TRAPPC4-202ENST00000434101 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC4-202ENST00000434101 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC4-202ENST00000434101 HSPA1AP0DMV8 641 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 HSPA1BP0DMV9 641 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 RLBP1P12271 317 aa16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 HUNKP57058 714 aa16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 CFAP100Q494V2 611 aa16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 DLK2Q6UY11 383 aa16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 GNL3LQ9NVN8 582 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 TTF2Q9UNY4 1162 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-202ENST00000434101 THSD7BQ9C0I4 1608 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 PAPPA2Q9BXP8 1791 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 NF2P35240 595 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 FKBP1BP68106 108 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 GRM1Q13255 1194 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 CYP4F22Q6NT55 531 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 SERPINA10Q9UK55 444 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 AKAP2Q9Y2D5 859 aa16.37■□□□□ 0.21
TRAPPC4-202ENST00000434101 COL1A1P02452 1464 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 AIDAQ96BJ3 306 aa16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 MAST3O60307 1309 aa16.36■□□□□ 0.21
TRAPPC4-202ENST00000434101 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
TRAPPC4-202ENST00000434101 MAP2K2P36507 400 aa16.35■□□□□ 0.21
TRAPPC4-202ENST00000434101 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
TRAPPC4-202ENST00000434101 HDLBPQ00341 1268 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-202ENST00000434101 SEMA3EO15041 775 aa16.34■□□□□ 0.21
TRAPPC4-202ENST00000434101 TFCP2Q12800 502 aa16.34■□□□□ 0.21
TRAPPC4-202ENST00000434101 RGMBQ6NW40 437 aa16.34■□□□□ 0.21
TRAPPC4-202ENST00000434101 PANK1Q8TE04 598 aa16.34■□□□□ 0.21
TRAPPC4-202ENST00000434101 PRMT6Q96LA8 375 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-202ENST00000434101 SCAF8Q9UPN6 1271 aaKnown RBP16.34■□□□□ 0.21
TRAPPC4-202ENST00000434101 PPP2R3BQ9Y5P8 575 aa16.34■□□□□ 0.21
TRAPPC4-202ENST00000434101 ZBTB22O15209 634 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 CRKP46108 304 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 POLA2Q14181 598 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 SSH3Q8TE77 659 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 CCDC102AQ96A19 550 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 C1orf115Q9H7X2 142 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 VEZTQ9HBM0 779 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 WBP1LQ9NX94 342 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 DENND2AQ9ULE3 1009 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 PCDHAC2Q9Y5I4 1007 aa16.33■□□□□ 0.2
TRAPPC4-202ENST00000434101 A0A1B0GUL7 405 aa16.32■□□□□ 0.2
TRAPPC4-202ENST00000434101 CLRN2A0PK11 232 aa16.32■□□□□ 0.2
TRAPPC4-202ENST00000434101 PHKA1P46020 1223 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms