RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 PCDHAC2Q9Y5I4 1007 aa27.54■■■□□ 2
RPUSD3-206ENST00000433535 ECM29Q5VYK3 1845 aa27.53■■■□□ 2
RPUSD3-206ENST00000433535 APOBEC3FQ8IUX4 373 aaKnown RBP27.53■■■□□ 2
RPUSD3-206ENST00000433535 BICC1Q9H694 974 aaKnown RBP27.53■■■□□ 2
RPUSD3-206ENST00000433535 PTPRCP08575 1304 aa27.52■■■□□ 2
RPUSD3-206ENST00000433535 CSRNP1Q96S65 589 aa27.52■■■□□ 2
RPUSD3-206ENST00000433535 RNF186Q9NXI6 227 aa27.52■■■□□ 2
RPUSD3-206ENST00000433535 SAGE1Q9NXZ1 904 aa27.52■■■□□ 2
RPUSD3-206ENST00000433535 TRPA1O75762 1119 aa27.51■■□□□ 1.99
RPUSD3-206ENST00000433535 NF2P35240 595 aa27.51■■□□□ 1.99
RPUSD3-206ENST00000433535 SLFN5Q08AF3 891 aa27.51■■□□□ 1.99
RPUSD3-206ENST00000433535 DLGAP5Q15398 846 aa27.51■■□□□ 1.99
RPUSD3-206ENST00000433535 ANKRD44Q8N8A2 993 aa27.5■■□□□ 1.99
RPUSD3-206ENST00000433535 CDCA7LQ96GN5 454 aa27.5■■□□□ 1.99
RPUSD3-206ENST00000433535 MCOLN1Q9GZU1 580 aa27.5■■□□□ 1.99
RPUSD3-206ENST00000433535 ARAP2Q8WZ64 1704 aa27.5■■□□□ 1.99
RPUSD3-206ENST00000433535 GYG1P46976 350 aa27.49■■□□□ 1.99
RPUSD3-206ENST00000433535 PRKG1Q13976 671 aa27.49■■□□□ 1.99
RPUSD3-206ENST00000433535 RABL6Q3YEC7 729 aaPredicted RBP27.49■■□□□ 1.99
RPUSD3-206ENST00000433535 UBE4AQ14139 1066 aa27.48■■□□□ 1.99
RPUSD3-206ENST00000433535 COL1A1P02452 1464 aaPredicted RBP27.48■■□□□ 1.99
RPUSD3-206ENST00000433535 AOX1Q06278 1338 aa27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 CCDC85CA6NKD9 419 aa27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 FKBP1AP62942 108 aaKnown RBP27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 DGKZQ13574 1117 aa27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 CFAP100Q494V2 611 aa27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 MTMR14Q8NCE2 650 aa27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 FZD1Q9UP38 647 aa27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 RIPOR2Q9Y4F9 1068 aa27.47■■□□□ 1.99
RPUSD3-206ENST00000433535 CLRN2A0PK11 232 aa27.46■■□□□ 1.99
RPUSD3-206ENST00000433535 LRRC24Q50LG9 513 aa27.46■■□□□ 1.99
RPUSD3-206ENST00000433535 SSC5DA1L4H1 1573 aa27.46■■□□□ 1.99
RPUSD3-206ENST00000433535 MROH5Q6ZUA9 1318 aa27.45■■□□□ 1.99
RPUSD3-206ENST00000433535 SPDYE2BA6NHP3 402 aa27.45■■□□□ 1.98
RPUSD3-206ENST00000433535 SPDYE6P0CI01 402 aa27.45■■□□□ 1.98
RPUSD3-206ENST00000433535 MKRN3Q13064 507 aaKnown RBP27.45■■□□□ 1.98
RPUSD3-206ENST00000433535 TDRD7Q8NHU6 1098 aaKnown RBP27.45■■□□□ 1.98
RPUSD3-206ENST00000433535 FAM84BQ96KN1 310 aaPredicted RBP27.45■■□□□ 1.98
RPUSD3-206ENST00000433535 DEFB129Q9H1M3 183 aa27.45■■□□□ 1.98
RPUSD3-206ENST00000433535 FAM205AQ6ZU69 1335 aa27.44■■□□□ 1.98
RPUSD3-206ENST00000433535 HIBADHP31937 336 aaKnown RBP27.44■■□□□ 1.98
RPUSD3-206ENST00000433535 PTPN12Q05209 780 aaKnown RBP27.44■■□□□ 1.98
RPUSD3-206ENST00000433535 MFSD14BQ5SR56 506 aa27.44■■□□□ 1.98
RPUSD3-206ENST00000433535 KLHDC4Q8TBB5 520 aa27.44■■□□□ 1.98
RPUSD3-206ENST00000433535 PRMT6Q96LA8 375 aaPredicted RBP27.44■■□□□ 1.98
RPUSD3-206ENST00000433535 USP44Q9H0E7 712 aa27.44■■□□□ 1.98
RPUSD3-206ENST00000433535 RBM5P52756 815 aaKnown RBP eCLIP27.43■■□□□ 1.98
RPUSD3-206ENST00000433535 ARMC9Q7Z3E5 817 aa27.43■■□□□ 1.98
RPUSD3-206ENST00000433535 REM2Q8IYK8 340 aaPredicted RBP27.43■■□□□ 1.98
RPUSD3-206ENST00000433535 VEZTQ9HBM0 779 aa27.43■■□□□ 1.98
RPUSD3-206ENST00000433535 SMC4Q9NTJ3 1288 aa27.43■■□□□ 1.98
RPUSD3-206ENST00000433535 ANGEL1Q9UNK9 670 aaKnown RBP27.43■■□□□ 1.98
RPUSD3-206ENST00000433535 MYO1BO43795 1136 aa27.42■■□□□ 1.98
RPUSD3-206ENST00000433535 METTL24Q5JXM2 366 aa27.42■■□□□ 1.98
RPUSD3-206ENST00000433535 ALDH1L2Q3SY69 923 aa27.41■■□□□ 1.98
RPUSD3-206ENST00000433535 IQSEC3Q9UPP2 1182 aaPredicted RBP27.41■■□□□ 1.98
RPUSD3-206ENST00000433535 VGLL2Q8N8G2 317 aa27.4■■□□□ 1.98
RPUSD3-206ENST00000433535 TTF2Q9UNY4 1162 aaKnown RBP27.4■■□□□ 1.98
RPUSD3-206ENST00000433535 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.39■■□□□ 1.98
RPUSD3-206ENST00000433535 PPP2R3BQ9Y5P8 575 aa27.39■■□□□ 1.98
RPUSD3-206ENST00000433535 LDLRAD1Q5T700 205 aa27.38■■□□□ 1.97
RPUSD3-206ENST00000433535 VPS37DQ86XT2 251 aa27.38■■□□□ 1.97
RPUSD3-206ENST00000433535 TRMT2AQ8IZ69 625 aaKnown RBP27.38■■□□□ 1.97
RPUSD3-206ENST00000433535 CHAF1AQ13111 956 aaPredicted RBP27.37■■□□□ 1.97
RPUSD3-206ENST00000433535 FBXO33Q7Z6M2 555 aa27.37■■□□□ 1.97
RPUSD3-206ENST00000433535 PDE8BO95263 885 aa27.36■■□□□ 1.97
RPUSD3-206ENST00000433535 GRIK5Q16478 980 aa27.36■■□□□ 1.97
RPUSD3-206ENST00000433535 NBPF12Q5TAG4 269 aaPredicted RBP27.36■■□□□ 1.97
RPUSD3-206ENST00000433535 TBC1D8O95759 1140 aa27.35■■□□□ 1.97
RPUSD3-206ENST00000433535 RASA3Q14644 834 aa27.35■■□□□ 1.97
RPUSD3-206ENST00000433535 SPDYE2Q495Y8 402 aa27.35■■□□□ 1.97
RPUSD3-206ENST00000433535 SPRYD7Q5W111 196 aa27.35■■□□□ 1.97
RPUSD3-206ENST00000433535 CLMNQ96JQ2 1002 aa27.35■■□□□ 1.97
RPUSD3-206ENST00000433535 SERPINA10Q9UK55 444 aa27.35■■□□□ 1.97
RPUSD3-206ENST00000433535 OTOFQ9HC10 1997 aa27.35■■□□□ 1.97
RPUSD3-206ENST00000433535 TM4SF4P48230 202 aa27.34■■□□□ 1.97
RPUSD3-206ENST00000433535 RFX5P48382 616 aaPredicted RBP27.34■■□□□ 1.97
RPUSD3-206ENST00000433535 MAP3K11Q16584 847 aa27.34■■□□□ 1.97
RPUSD3-206ENST00000433535 CAVIN4Q5BKX8 364 aa27.34■■□□□ 1.97
RPUSD3-206ENST00000433535 TDRD3Q9H7E2 651 aaKnown RBP27.34■■□□□ 1.97
RPUSD3-206ENST00000433535 ZNF70Q9UC06 446 aaPredicted RBP27.34■■□□□ 1.97
RPUSD3-206ENST00000433535 PPP1R12BO60237 982 aaPredicted RBP27.33■■□□□ 1.97
RPUSD3-206ENST00000433535 FRAT2O75474 233 aaPredicted RBP27.33■■□□□ 1.97
RPUSD3-206ENST00000433535 CRKP46108 304 aa27.33■■□□□ 1.97
RPUSD3-206ENST00000433535 BCAMP50895 628 aa27.33■■□□□ 1.97
RPUSD3-206ENST00000433535 SREBF2Q12772 1141 aa27.33■■□□□ 1.97
RPUSD3-206ENST00000433535 DZIP1LQ8IYY4 767 aaKnown RBP27.33■■□□□ 1.97
RPUSD3-206ENST00000433535 NOB1Q9ULX3 412 aaKnown RBP27.33■■□□□ 1.97
RPUSD3-206ENST00000433535 CCER2I3L3R5 266 aa27.32■■□□□ 1.96
RPUSD3-206ENST00000433535 PUM3Q15397 648 aaKnown RBP27.32■■□□□ 1.96
RPUSD3-206ENST00000433535 SUPT20HL1Q3ZLR7 823 aa27.32■■□□□ 1.96
RPUSD3-206ENST00000433535 MYH13Q9UKX3 1938 aa27.31■■□□□ 1.96
RPUSD3-206ENST00000433535 LAMB1P07942 1786 aa27.31■■□□□ 1.96
RPUSD3-206ENST00000433535 EYA2O00167 538 aa27.31■■□□□ 1.96
RPUSD3-206ENST00000433535 CT47B1P0C2W7 299 aaPredicted RBP27.31■■□□□ 1.96
RPUSD3-206ENST00000433535 CTU1Q7Z7A3 348 aaKnown RBP27.31■■□□□ 1.96
RPUSD3-206ENST00000433535 CDAN1Q8IWY9 1227 aa27.31■■□□□ 1.96
RPUSD3-206ENST00000433535 SLC10A4Q96EP9 437 aa27.31■■□□□ 1.96
RPUSD3-206ENST00000433535 UBTFL1P0CB47 393 aaPredicted RBP27.3■■□□□ 1.96
RPUSD3-206ENST00000433535 FGFR2P21802 821 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms