RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 HDAC9Q9UKV0 1011 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 IKBKBO14920 756 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 BAG4O95429 457 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 ARL6IP4Q66PJ3 421 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 TACO1Q9BSH4 297 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 PDCL3Q9H2J4 239 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 TMX1Q9H3N1 280 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 PUM3Q15397 648 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 ARMC9Q7Z3E5 817 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 AHDC1Q5TGY3 1603 aaPredicted RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 F13A1P00488 732 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 HOXC6P09630 235 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 CDC37Q16543 378 aaPredicted RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 IFI16Q16666 785 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 SMARCA1P28370 1054 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 GCKRQ14397 625 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 DRC7Q8IY82 874 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 NEUROD6Q96NK8 337 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 PCDHB15Q9Y5E8 787 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 LRRFIP2Q9Y608 721 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 NUTM2FA1L443 756 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 APBB1O00213 710 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 RNF113AO15541 343 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 TMEM266Q2M3C6 531 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 NUTM2GQ5VZR2 741 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 NOL8Q76FK4 1167 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 ZMYND15Q9H091 742 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 ANTXR1Q9H6X2 564 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 GINM1Q9NU53 330 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 MED23Q9ULK4 1368 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 RNMTO43148 476 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 CETN1Q12798 172 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 GTF3C6Q969F1 213 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 MPHOSPH6Q99547 160 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 FAM129AQ9BZQ8 928 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.33□□□□□ -1.727e-8■■□□□ 14.4
SHPRH-205ENST00000433355 LAMA4Q16363 1823 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 FOXP2O15409 715 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 DDAH1O94760 285 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 SDSP20132 328 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 SAMD3Q8N6K7 520 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 ZNF579Q8NAF0 562 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 AK8Q96MA6 479 aa4.33□□□□□ -1.72
SHPRH-205ENST00000433355 DNAJC2Q99543 621 aaKnown RBP4.33□□□□□ -1.72
SHPRH-205ENST00000433355 TNS2Q63HR2 1409 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 LAMB2P55268 1798 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 EVCP57679 992 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 ILF2Q12905 390 aaKnown RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 RABL6Q3YEC7 729 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 RNF14Q9UBS8 474 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 ANGEL1Q9UNK9 670 aaKnown RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 HMOX1P09601 288 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 SH3BGRP55822 239 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 ALCAMQ13740 583 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 UPF3BQ9BZI7 483 aaKnown RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 ARPP21Q9UBL0 812 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 NUTM2DQ5VT03 806 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 NUTM2AQ8IVF1 878 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 DISP2A7MBM2 1401 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 TUBGCP6Q96RT7 1819 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 PLCD1P51178 756 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 GABPB1Q06547 395 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 BEND3Q5T5X7 828 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 EYA1Q99502 592 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 DESP17661 470 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 CCDC102BQ68D86 513 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 SARM1Q6SZW1 724 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 ZNF804AQ7Z570 1209 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 GOLGA5Q8TBA6 731 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 ALS2CR12Q96Q35 445 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 PPP1R9BQ96SB3 815 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 CRNKL1Q9BZJ0 848 aaKnown RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 STMN4Q9H169 189 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 MAST2Q6P0Q8 1798 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 PFKFB2O60825 505 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 VWA3BQ502W6 1294 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 RUFY3Q7L099 469 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 CATIPQ7Z7H3 387 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 ZNF397Q8NF99 534 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 PDE4DIPQ5VU43 2346 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 OFD1O75665 1012 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 SGMS1Q86VZ5 419 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 C8orf76Q96K31 380 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 TSGA10Q9BZW7 698 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 KIF4AO95239 1232 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 EIF4A1P60842 406 aaKnown RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 CTR9Q6PD62 1173 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 NUP188Q5SRE5 1749 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 GCFC2P16383 781 aaKnown RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 FBXO31Q5XUX0 539 aaPredicted RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 MLKLQ8NB16 471 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 PAG1Q9NWQ8 432 aa4.32□□□□□ -1.72
SHPRH-205ENST00000433355 SEC63Q9UGP8 760 aaKnown RBP4.32□□□□□ -1.72
SHPRH-205ENST00000433355 PNPLA7Q6ZV29 1317 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 ARHGAP6O43182 974 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 PLIN1O60240 522 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 APBA1Q02410 837 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 APBB1IPQ7Z5R6 666 aaPredicted RBP4.31□□□□□ -1.72
SHPRH-205ENST00000433355 IWS1Q96ST2 819 aa4.31□□□□□ -1.72
SHPRH-205ENST00000433355 NAP1L3Q99457 506 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms