RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 ZNF532Q9HCE3 1301 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 LEO1Q8WVC0 666 aaPredicted RBP13.32□□□□□ -0.28
CLDN4-202ENST00000431918 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 ISCA1Q9BUE6 129 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 ZSCAN16Q9H4T2 348 aaPredicted RBP13.32□□□□□ -0.28
CLDN4-202ENST00000431918 ARMT1Q9H993 441 aa13.32□□□□□ -0.28
CLDN4-202ENST00000431918 BIN1O00499 593 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 ZPR1O75312 459 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 ANO6Q4KMQ2 910 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 CCDC102BQ68D86 513 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 SLC12A7Q9Y666 1083 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 SLC4A4Q9Y6R1 1079 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 ISM2Q6H9L7 571 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 CDC5LQ99459 802 aaKnown RBP13.31□□□□□ -0.28
CLDN4-202ENST00000431918 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLDN4-202ENST00000431918 DDX19AQ9NUU7 478 aaKnown RBP13.31□□□□□ -0.28
CLDN4-202ENST00000431918 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 CIAO1O76071 339 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 CYP7A1P22680 504 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 SIK1P57059 783 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
CLDN4-202ENST00000431918 CAVIN4Q5BKX8 364 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 ZNF609O15014 1411 aa13.31□□□□□ -0.28
CLDN4-202ENST00000431918 RPAP1Q9BWH6 1393 aaPredicted RBP13.3□□□□□ -0.28
CLDN4-202ENST00000431918 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
CLDN4-202ENST00000431918 ZNF165P49910 485 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 LUZP1Q86V48 1076 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 GPR108Q9NPR9 543 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
CLDN4-202ENST00000431918 TYRO3Q06418 890 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 STOX1Q6ZVD7 989 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 ERCC4Q92889 916 aaPredicted RBP13.3□□□□□ -0.28
CLDN4-202ENST00000431918 SLC26A6Q9BXS9 759 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 PDE8BO95263 885 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 TPM4P67936 248 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 ANKRD18AQ8IVF6 992 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 CPDO75976 1380 aa13.3□□□□□ -0.28
CLDN4-202ENST00000431918 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-202ENST00000431918 BCAMP50895 628 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 MFSD6Q6ZSS7 791 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 FILIP1Q7Z7B0 1213 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 CDKL5O76039 1030 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 IARSP41252 1262 aaKnown RBP13.29□□□□□ -0.28
CLDN4-202ENST00000431918 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 ALG1Q9BT22 464 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 ZBTB43O43298 467 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 CYP19A1P11511 503 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-202ENST00000431918 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
CLDN4-202ENST00000431918 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 LPIN2Q92539 896 aa13.29□□□□□ -0.28
CLDN4-202ENST00000431918 NRDCO43847 1150 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 MCAMP43121 646 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
CLDN4-202ENST00000431918 CASP7P55210 303 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 PHKBQ93100 1093 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 PDE6AP16499 860 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 SUSD4Q5VX71 490 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 MED23Q9ULK4 1368 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 SMC2O95347 1197 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
CLDN4-202ENST00000431918 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
CLDN4-202ENST00000431918 SPATA5Q8NB90 893 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 PPP1R9BQ96SB3 815 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 ZKSCAN5Q9Y2L8 839 aa13.28□□□□□ -0.28
CLDN4-202ENST00000431918 SLIT3O75094 1523 aa13.27□□□□□ -0.28
CLDN4-202ENST00000431918 A0A1B0GVL5 298 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 PFKFB2O60825 505 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 NR1I2O75469 434 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 NOL10Q9BSC4 688 aaKnown RBP13.27□□□□□ -0.29
CLDN4-202ENST00000431918 GJB4Q9NTQ9 266 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 ADD1P35611 737 aaKnown RBP13.27□□□□□ -0.29
CLDN4-202ENST00000431918 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
CLDN4-202ENST00000431918 NSUN7Q8NE18 718 aaKnown RBP13.27□□□□□ -0.29
CLDN4-202ENST00000431918 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 USP28Q96RU2 1077 aa13.27□□□□□ -0.29
CLDN4-202ENST00000431918 DCCP43146 1447 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 KCNQ2O43526 872 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 TOM1O60784 492 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
CLDN4-202ENST00000431918 PIH1D3Q9NQM4 214 aaKnown RBP13.26□□□□□ -0.29
CLDN4-202ENST00000431918 A0A087WWV3 80 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 G3V3G9 751 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 GYG1P46976 350 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms