RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 WRNIP1Q96S55 665 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 JAG2Q9Y219 1238 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 FOXN1O15353 648 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 SF3B3Q15393 1217 aaKnown RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 IDH1O75874 414 aaKnown RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 CT47B1P0C2W7 299 aaPredicted RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 FAM161AQ3B820 660 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 ZKSCAN2Q63HK3 967 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 CLASRPQ8N2M8 674 aaKnown RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 TSR2Q969E8 191 aaKnown RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 MCOLN1Q9GZU1 580 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 USP40Q9NVE5 1235 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 IL16Q14005 1332 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 TRAF5O00463 557 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 IL15P40933 162 aaPredicted RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 CHRNDQ07001 517 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 SAGE1Q9NXZ1 904 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 NOD1Q9Y239 953 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 KDRP35968 1356 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 ADM5C9JUS6 153 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 AOC2O75106 756 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 NAA16Q6N069 864 aaPredicted RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 PRKRIP1Q9H875 184 aaPredicted RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 PTPRCP08575 1304 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 EVI5O60447 810 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 SLC10A5Q5PT55 438 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 FBXO46Q6PJ61 603 aaPredicted RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 GPHNQ9NQX3 736 aaPredicted RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 RASSF10A6NK89 507 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 NTSR2O95665 410 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 USP14P54578 494 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 TTF1Q15361 905 aaPredicted RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 TEX11Q8IYF3 940 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 PAGR1Q9BTK6 254 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 ARHGEF10LQ9HCE6 1279 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 SURF6O75683 361 aaKnown RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 TCP10Q12799 353 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 DPP9Q86TI2 863 aa5.56□□□□□ -1.52
UBE4A-202ENST00000431736 KRI1Q8N9T8 703 aaKnown RBP5.56□□□□□ -1.52
UBE4A-202ENST00000431736 KDM6AO15550 1401 aaPredicted RBP5.55□□□□□ -1.52
UBE4A-202ENST00000431736 FZD9O00144 591 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 ZEB2O60315 1214 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 GNRH1P01148 92 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 KBTBD13C9JR72 458 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 CAPN2P17655 700 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 TRMT44Q8IYL2 757 aaKnown RBP5.55□□□□□ -1.52
UBE4A-202ENST00000431736 CCDC129Q6ZRS4 1044 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 CELF1Q92879 486 aaKnown RBP5.55□□□□□ -1.52
UBE4A-202ENST00000431736 DEFB129Q9H1M3 183 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 MKNK2Q9HBH9 465 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 SPDYE4A6NLX3 237 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 CHL1O00533 1208 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 ERC2O15083 957 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 SRGAP3O43295 1099 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 MFAP1P55081 439 aaKnown RBP5.55□□□□□ -1.52
UBE4A-202ENST00000431736 SKIV2LQ15477 1246 aaKnown RBP5.55□□□□□ -1.52
UBE4A-202ENST00000431736 HHIPL1Q96JK4 782 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 PITPNM2Q9BZ72 1349 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 BTAF1O14981 1849 aa5.55□□□□□ -1.52
UBE4A-202ENST00000431736 TAF5LO75529 589 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 ERO1BQ86YB8 467 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 LPIN2Q92539 896 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 SEC31BQ9NQW1 1179 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 SEMA3EO15041 775 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 RNF208Q9H0X6 261 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 GPR25O00155 361 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 TBC1D8O95759 1140 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 HSPA8P11142 646 aaKnown RBP5.54□□□□□ -1.52
UBE4A-202ENST00000431736 RFX1P22670 979 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 RASA3Q14644 834 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 CSRNP1Q96S65 589 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 DNAJC2Q99543 621 aaKnown RBP5.54□□□□□ -1.52
UBE4A-202ENST00000431736 TBC1D2Q9BYX2 928 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 CD209Q9NNX6 404 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 C4BP0C0L5 1744 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 LTN1O94822 1766 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 ERICH2A1L162 156 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 CRKP46108 304 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 CHMP4BP1P59074 171 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 CWF19L2Q2TBE0 894 aaKnown RBP5.54□□□□□ -1.52
UBE4A-202ENST00000431736 ZNF444Q8N0Y2 327 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-202ENST00000431736 TANGO6Q9C0B7 1094 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 SUGT1Q9Y2Z0 365 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 EIF5BO60841 1220 aaKnown RBP5.54□□□□□ -1.52
UBE4A-202ENST00000431736 ZBTB48P10074 688 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-202ENST00000431736 DDX11Q96FC9 970 aa5.54□□□□□ -1.52
UBE4A-202ENST00000431736 NBPF26B4DH59 902 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 NBPF10Q6P3W6 841 aaKnown RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 SLC4A9Q96Q91 983 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 MYOM1P52179 1685 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 LMO7Q8WWI1 1683 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 DOT1LQ8TEK3 1739 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 COL13A1Q5TAT6 717 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 KIAA1211Q6ZU35 1233 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 GREM2Q9H772 168 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 NAP1L2Q9ULW6 460 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 KIF20BQ96Q89 1820 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 TLR3O15455 904 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms