RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 YDJCA8MPS7 323 aa18.57■□□□□ 0.56
CDRT15-202ENST00000431716 CCDC158Q5M9N0 1113 aa18.57■□□□□ 0.56
CDRT15-202ENST00000431716 ANKRD45Q5TZF3 282 aa18.57■□□□□ 0.56
CDRT15-202ENST00000431716 CCDC102BQ68D86 513 aa18.57■□□□□ 0.56
CDRT15-202ENST00000431716 LDHDQ86WU2 507 aa18.57■□□□□ 0.56
CDRT15-202ENST00000431716 CCDC8Q9H0W5 538 aaPredicted RBP18.57■□□□□ 0.56
CDRT15-202ENST00000431716 SEMA3EO15041 775 aa18.56■□□□□ 0.56
CDRT15-202ENST00000431716 SMARCA5O60264 1052 aaPredicted RBP18.56■□□□□ 0.56
CDRT15-202ENST00000431716 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
CDRT15-202ENST00000431716 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
CDRT15-202ENST00000431716 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
CDRT15-202ENST00000431716 DBNLQ9UJU6 430 aaKnown RBP18.56■□□□□ 0.56
CDRT15-202ENST00000431716 ARAP2Q8WZ64 1704 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 USP17L3A6NCW0 530 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 USP17L4A6NCW7 530 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 UQCRFS1P1P0C7P4 283 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 PHKA1P46020 1223 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 GMPSP49915 693 aaPredicted RBP18.55■□□□□ 0.56
CDRT15-202ENST00000431716 SCNN1DP51172 638 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 STRIP1Q5VSL9 837 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 USP17L1Q7RTZ2 530 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 PPP4R2Q9NY27 417 aa18.55■□□□□ 0.56
CDRT15-202ENST00000431716 EPS15P42566 896 aa18.54■□□□□ 0.56
CDRT15-202ENST00000431716 NUCB1Q02818 461 aa18.54■□□□□ 0.56
CDRT15-202ENST00000431716 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
CDRT15-202ENST00000431716 ZNF512BQ96KM6 892 aaPredicted RBP18.54■□□□□ 0.56
CDRT15-202ENST00000431716 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
CDRT15-202ENST00000431716 KCNQ5Q9NR82 932 aa18.54■□□□□ 0.56
CDRT15-202ENST00000431716 GPRC5DQ9NZD1 345 aa18.54■□□□□ 0.56
CDRT15-202ENST00000431716 PCDH10Q9P2E7 1040 aa18.54■□□□□ 0.56
CDRT15-202ENST00000431716 FAM205AQ6ZU69 1335 aa18.53■□□□□ 0.56
CDRT15-202ENST00000431716 VIL1P09327 827 aaKnown RBP18.53■□□□□ 0.56
CDRT15-202ENST00000431716 GTF2IP78347 998 aa18.53■□□□□ 0.56
CDRT15-202ENST00000431716 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
CDRT15-202ENST00000431716 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
CDRT15-202ENST00000431716 TLR7Q9NYK1 1049 aaKnown RBP18.53■□□□□ 0.56
CDRT15-202ENST00000431716 DENND2AQ9ULE3 1009 aa18.53■□□□□ 0.56
CDRT15-202ENST00000431716 SCN9AQ15858 1988 aa18.52■□□□□ 0.56
CDRT15-202ENST00000431716 PSMD14O00487 310 aa18.52■□□□□ 0.56
CDRT15-202ENST00000431716 ARID4AP29374 1257 aaPredicted RBP18.52■□□□□ 0.56
CDRT15-202ENST00000431716 USP50Q70EL3 339 aaPredicted RBP18.52■□□□□ 0.56
CDRT15-202ENST00000431716 CENPQQ7L2Z9 268 aaPredicted RBP18.52■□□□□ 0.56
CDRT15-202ENST00000431716 CHD1LQ86WJ1 897 aa18.52■□□□□ 0.56
CDRT15-202ENST00000431716 GPATCH3Q96I76 525 aa18.52■□□□□ 0.56
CDRT15-202ENST00000431716 ADARB2Q9NS39 739 aaKnown RBP18.52■□□□□ 0.56
CDRT15-202ENST00000431716 IQSEC3Q9UPP2 1182 aaPredicted RBP18.52■□□□□ 0.56
CDRT15-202ENST00000431716 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
CDRT15-202ENST00000431716 H7C1D1 291 aa18.51■□□□□ 0.55
CDRT15-202ENST00000431716 RPS12P25398 132 aaKnown RBP18.51■□□□□ 0.55
CDRT15-202ENST00000431716 FKBP1AP62942 108 aaKnown RBP18.51■□□□□ 0.55
CDRT15-202ENST00000431716 DACT2Q5SW24 774 aa18.51■□□□□ 0.55
CDRT15-202ENST00000431716 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
CDRT15-202ENST00000431716 TBC1D22AQ8WUA7 517 aa18.51■□□□□ 0.55
CDRT15-202ENST00000431716 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
CDRT15-202ENST00000431716 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
CDRT15-202ENST00000431716 ZBTB12Q9Y330 459 aaPredicted RBP18.51■□□□□ 0.55
CDRT15-202ENST00000431716 MYO3BQ8WXR4 1341 aa18.5■□□□□ 0.55
CDRT15-202ENST00000431716 RASGRF1Q13972 1273 aa18.5■□□□□ 0.55
CDRT15-202ENST00000431716 RSBN1LQ6PCB5 846 aaPredicted RBP18.5■□□□□ 0.55
CDRT15-202ENST00000431716 AGBL3Q8NEM8 1001 aa18.5■□□□□ 0.55
CDRT15-202ENST00000431716 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
CDRT15-202ENST00000431716 PSME4Q14997 1843 aa18.5■□□□□ 0.55
CDRT15-202ENST00000431716 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
CDRT15-202ENST00000431716 MAP1SQ66K74 1059 aaPredicted RBP18.49■□□□□ 0.55
CDRT15-202ENST00000431716 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
CDRT15-202ENST00000431716 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
CDRT15-202ENST00000431716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDRT15-202ENST00000431716 DPF2Q92785 391 aa18.49■□□□□ 0.55
CDRT15-202ENST00000431716 ECHDC1Q9NTX5 307 aa18.49■□□□□ 0.55
CDRT15-202ENST00000431716 ATP5JP18859 108 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 MCAMP43121 646 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 MMP14P50281 582 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 HTRA3P83110 453 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 MFSD14BQ5SR56 506 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 MICALL2Q8IY33 904 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 TTC41PQ6P2S7 1318 aa18.48■□□□□ 0.55
CDRT15-202ENST00000431716 MYH13Q9UKX3 1938 aa18.47■□□□□ 0.55
CDRT15-202ENST00000431716 MX1P20591 662 aa18.47■□□□□ 0.55
CDRT15-202ENST00000431716 COL13A1Q5TAT6 717 aaPredicted RBP18.47■□□□□ 0.55
CDRT15-202ENST00000431716 ZGPATQ8N5A5 531 aaKnown RBP18.47■□□□□ 0.55
CDRT15-202ENST00000431716 GMLQ99445 158 aa18.47■□□□□ 0.55
CDRT15-202ENST00000431716 JAG2Q9Y219 1238 aa18.47■□□□□ 0.55
CDRT15-202ENST00000431716 SUGT1Q9Y2Z0 365 aa18.47■□□□□ 0.55
CDRT15-202ENST00000431716 SALL1Q9NSC2 1324 aa18.47■□□□□ 0.55
CDRT15-202ENST00000431716 ERC2O15083 957 aa18.46■□□□□ 0.55
CDRT15-202ENST00000431716 SCARF1Q14162 830 aa18.46■□□□□ 0.55
CDRT15-202ENST00000431716 TNS4Q8IZW8 715 aa18.46■□□□□ 0.55
CDRT15-202ENST00000431716 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
CDRT15-202ENST00000431716 SCN4AP35499 1836 aa18.46■□□□□ 0.55
CDRT15-202ENST00000431716 ITGBL1O95965 494 aaPredicted RBP18.45■□□□□ 0.54
CDRT15-202ENST00000431716 USP17L8P0C7I0 530 aa18.45■□□□□ 0.54
CDRT15-202ENST00000431716 RBM26Q5T8P6 1007 aaKnown RBP18.45■□□□□ 0.54
CDRT15-202ENST00000431716 SPTY2D1Q68D10 685 aaPredicted RBP18.45■□□□□ 0.54
CDRT15-202ENST00000431716 OGFOD1Q8N543 542 aa18.45■□□□□ 0.54
CDRT15-202ENST00000431716 CERS5Q8N5B7 392 aa18.45■□□□□ 0.54
CDRT15-202ENST00000431716 OTUD7AQ8TE49 926 aaPredicted RBP18.45■□□□□ 0.54
CDRT15-202ENST00000431716 MXD3Q9BW11 206 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms