RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 DPF2Q92785 391 aa30.94■■■□□ 2.54
CPNE1-212ENST00000430570 TAF1DQ9H5J8 278 aaPredicted RBP30.94■■■□□ 2.54
CPNE1-212ENST00000430570 TLR7Q9NYK1 1049 aaKnown RBP30.94■■■□□ 2.54
CPNE1-212ENST00000430570 CNOT7Q9UIV1 285 aaKnown RBP30.94■■■□□ 2.54
CPNE1-212ENST00000430570 SCN4AP35499 1836 aa30.93■■■□□ 2.54
CPNE1-212ENST00000430570 IQCA1LA6NCM1 817 aa30.93■■■□□ 2.54
CPNE1-212ENST00000430570 SMARCA5O60264 1052 aaPredicted RBP30.93■■■□□ 2.54
CPNE1-212ENST00000430570 FRAT2O75474 233 aaPredicted RBP30.93■■■□□ 2.54
CPNE1-212ENST00000430570 RPS12P25398 132 aaKnown RBP30.93■■■□□ 2.54
CPNE1-212ENST00000430570 LMOD1P29536 600 aaPredicted RBP30.93■■■□□ 2.54
CPNE1-212ENST00000430570 CHAF1AQ13111 956 aaPredicted RBP30.93■■■□□ 2.54
CPNE1-212ENST00000430570 BCL11AQ9H165 835 aa30.93■■■□□ 2.54
CPNE1-212ENST00000430570 DBNLQ9UJU6 430 aaKnown RBP30.93■■■□□ 2.54
CPNE1-212ENST00000430570 EPHX2P34913 555 aa30.92■■■□□ 2.54
CPNE1-212ENST00000430570 AACSQ86V21 672 aa30.92■■■□□ 2.54
CPNE1-212ENST00000430570 MICALL2Q8IY33 904 aa30.92■■■□□ 2.54
CPNE1-212ENST00000430570 COL1A1P02452 1464 aaPredicted RBP30.91■■■□□ 2.54
CPNE1-212ENST00000430570 IGHDP01880 384 aa30.91■■■□□ 2.54
CPNE1-212ENST00000430570 GORABQ5T7V8 394 aa30.91■■■□□ 2.54
CPNE1-212ENST00000430570 GNL3LQ9NVN8 582 aaKnown RBP30.91■■■□□ 2.54
CPNE1-212ENST00000430570 CLASRPQ8N2M8 674 aaKnown RBP30.9■■■□□ 2.54
CPNE1-212ENST00000430570 LRRCC1Q9C099 1032 aa30.9■■■□□ 2.54
CPNE1-212ENST00000430570 MYO3BQ8WXR4 1341 aa30.88■■■□□ 2.53
CPNE1-212ENST00000430570 FKBP1AP62942 108 aaKnown RBP30.88■■■□□ 2.53
CPNE1-212ENST00000430570 GRIK5Q16478 980 aa30.88■■■□□ 2.53
CPNE1-212ENST00000430570 KIAA0825Q8IV33 1275 aa30.88■■■□□ 2.53
CPNE1-212ENST00000430570 H7C1D1 291 aa30.87■■■□□ 2.53
CPNE1-212ENST00000430570 POTEIP0CG38 1075 aa30.87■■■□□ 2.53
CPNE1-212ENST00000430570 POTEJP0CG39 1038 aa30.87■■■□□ 2.53
CPNE1-212ENST00000430570 RASGRF1Q13972 1273 aa30.87■■■□□ 2.53
CPNE1-212ENST00000430570 MFSD14BQ5SR56 506 aa30.87■■■□□ 2.53
CPNE1-212ENST00000430570 SAMD7Q7Z3H4 446 aa30.87■■■□□ 2.53
CPNE1-212ENST00000430570 RWDD1Q9H446 243 aaPredicted RBP30.87■■■□□ 2.53
CPNE1-212ENST00000430570 SEMA3EO15041 775 aa30.86■■■□□ 2.53
CPNE1-212ENST00000430570 ZBTB22O15209 634 aa30.86■■■□□ 2.53
CPNE1-212ENST00000430570 EGFRP00533 1210 aa30.86■■■□□ 2.53
CPNE1-212ENST00000430570 USP17L8P0C7I0 530 aa30.86■■■□□ 2.53
CPNE1-212ENST00000430570 ARID4AP29374 1257 aaPredicted RBP30.86■■■□□ 2.53
CPNE1-212ENST00000430570 SCARF1Q14162 830 aa30.86■■■□□ 2.53
CPNE1-212ENST00000430570 ADARB2Q9NS39 739 aaKnown RBP30.86■■■□□ 2.53
CPNE1-212ENST00000430570 DENND2AQ9ULE3 1009 aa30.86■■■□□ 2.53
CPNE1-212ENST00000430570 MYH13Q9UKX3 1938 aa30.85■■■□□ 2.53
CPNE1-212ENST00000430570 F8W031 263 aaPredicted RBP30.85■■■□□ 2.53
CPNE1-212ENST00000430570 ZNF280AP59817 542 aaPredicted RBP30.85■■■□□ 2.53
CPNE1-212ENST00000430570 CCDC158Q5M9N0 1113 aa30.85■■■□□ 2.53
CPNE1-212ENST00000430570 TRPM4Q8TD43 1214 aa30.85■■■□□ 2.53
CPNE1-212ENST00000430570 EAPPQ56P03 285 aaPredicted RBP30.84■■■□□ 2.53
CPNE1-212ENST00000430570 TTC39AQ5SRH9 613 aa30.84■■■□□ 2.53
CPNE1-212ENST00000430570 RBM26Q5T8P6 1007 aaKnown RBP30.84■■■□□ 2.53
CPNE1-212ENST00000430570 HMG20BQ9P0W2 317 aa30.84■■■□□ 2.53
CPNE1-212ENST00000430570 IFIT2P09913 472 aaKnown RBP30.83■■■□□ 2.53
CPNE1-212ENST00000430570 UQCRFS1P1P0C7P4 283 aa30.83■■■□□ 2.53
CPNE1-212ENST00000430570 MCAMP43121 646 aa30.83■■■□□ 2.53
CPNE1-212ENST00000430570 HIRAP54198 1017 aaPredicted RBP30.83■■■□□ 2.53
CPNE1-212ENST00000430570 TBC1D10BQ4KMP7 808 aaPredicted RBP30.83■■■□□ 2.53
CPNE1-212ENST00000430570 PI16Q6UXB8 463 aa30.83■■■□□ 2.53
CPNE1-212ENST00000430570 C16orf71Q8IYS4 520 aaPredicted RBP30.83■■■□□ 2.53
CPNE1-212ENST00000430570 GCC1Q96CN9 775 aa30.83■■■□□ 2.53
CPNE1-212ENST00000430570 WDR66Q8TBY9 1149 aa30.82■■■□□ 2.52
CPNE1-212ENST00000430570 TBC1D22AQ8WUA7 517 aa30.82■■■□□ 2.52
CPNE1-212ENST00000430570 USP50Q70EL3 339 aaPredicted RBP30.81■■■□□ 2.52
CPNE1-212ENST00000430570 PNMA8AQ86V59 439 aaPredicted RBP30.81■■■□□ 2.52
CPNE1-212ENST00000430570 SPATA5Q8NB90 893 aa30.8■■■□□ 2.52
CPNE1-212ENST00000430570 ZNF512BQ96KM6 892 aaPredicted RBP30.8■■■□□ 2.52
CPNE1-212ENST00000430570 SNRKQ9NRH2 765 aa30.8■■■□□ 2.52
CPNE1-212ENST00000430570 TOMM70O94826 608 aa30.79■■■□□ 2.52
CPNE1-212ENST00000430570 ANKRD45Q5TZF3 282 aa30.79■■■□□ 2.52
CPNE1-212ENST00000430570 SMC5Q8IY18 1101 aa30.79■■■□□ 2.52
CPNE1-212ENST00000430570 OGFOD1Q8N543 542 aa30.79■■■□□ 2.52
CPNE1-212ENST00000430570 MYOZ2Q9NPC6 264 aa30.79■■■□□ 2.52
CPNE1-212ENST00000430570 TTF2Q9UNY4 1162 aaKnown RBP30.79■■■□□ 2.52
CPNE1-212ENST00000430570 KIF4BQ2VIQ3 1234 aa30.78■■■□□ 2.52
CPNE1-212ENST00000430570 HDAC9Q9UKV0 1011 aa30.78■■■□□ 2.52
CPNE1-212ENST00000430570 PDS5AQ29RF7 1337 aaKnown RBP30.78■■■□□ 2.52
CPNE1-212ENST00000430570 SALL1Q9NSC2 1324 aa30.78■■■□□ 2.52
CPNE1-212ENST00000430570 CLEC11AQ9Y240 323 aa30.77■■■□□ 2.52
CPNE1-212ENST00000430570 PCDHAC2Q9Y5I4 1007 aa30.77■■■□□ 2.52
CPNE1-212ENST00000430570 ADAMTSL1Q8N6G6 1762 aa30.77■■■□□ 2.52
CPNE1-212ENST00000430570 AKAP11Q9UKA4 1901 aa30.77■■■□□ 2.52
CPNE1-212ENST00000430570 LDHDQ86WU2 507 aa30.76■■■□□ 2.52
CPNE1-212ENST00000430570 PRDX5P30044 214 aa30.75■■■□□ 2.51
CPNE1-212ENST00000430570 B4GALNT3Q6L9W6 998 aa30.75■■■□□ 2.51
CPNE1-212ENST00000430570 TBC1D9Q6ZT07 1266 aa30.75■■■□□ 2.51
CPNE1-212ENST00000430570 RBM46Q8TBY0 533 aaKnown RBP30.75■■■□□ 2.51
CPNE1-212ENST00000430570 ZAP70P43403 619 aa30.74■■■□□ 2.51
CPNE1-212ENST00000430570 ABCF2Q9UG63 623 aa30.74■■■□□ 2.51
CPNE1-212ENST00000430570 SUGT1Q9Y2Z0 365 aa30.74■■■□□ 2.51
CPNE1-212ENST00000430570 NDUFB9Q9Y6M9 179 aa30.74■■■□□ 2.51
CPNE1-212ENST00000430570 ASTN2O75129 1339 aaPredicted RBP30.74■■■□□ 2.51
CPNE1-212ENST00000430570 MMP14P50281 582 aa30.73■■■□□ 2.51
CPNE1-212ENST00000430570 CFAP100Q494V2 611 aa30.73■■■□□ 2.51
CPNE1-212ENST00000430570 OTUD7AQ8TE49 926 aaPredicted RBP30.73■■■□□ 2.51
CPNE1-212ENST00000430570 NBPF9Q3BBW0 867 aa30.73■■■□□ 2.51
CPNE1-212ENST00000430570 ZBED3Q96IU2 234 aaPredicted RBP30.73■■■□□ 2.51
CPNE1-212ENST00000430570 WNT10BO00744 389 aa30.72■■■□□ 2.51
CPNE1-212ENST00000430570 CYP2E1P05181 493 aaPredicted RBP30.72■■■□□ 2.51
CPNE1-212ENST00000430570 LDHBP07195 334 aaKnown RBP30.72■■■□□ 2.51
CPNE1-212ENST00000430570 NEFLP07196 543 aa30.72■■■□□ 2.51
CPNE1-212ENST00000430570 CHADLQ6NUI6 762 aa30.72■■■□□ 2.51
CPNE1-212ENST00000430570 PGAP2Q9UHJ9 254 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms