RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZBED3Q96IU2 234 aaPredicted RBP21.24■□□□□ 0.99
UBE3D-204ENST00000430071 FAM84BQ96KN1 310 aaPredicted RBP21.24■□□□□ 0.99
UBE3D-204ENST00000430071 F8W031 263 aaPredicted RBP21.23■□□□□ 0.99
UBE3D-204ENST00000430071 LBX1P52954 281 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 UBE4AQ14139 1066 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 MOB2Q70IA6 237 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 VGLL2Q8N8G2 317 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 ARHGAP45Q92619 1136 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 HSPA8P11142 646 aaKnown RBP21.23■□□□□ 0.99
UBE3D-204ENST00000430071 OGFOD1Q8N543 542 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 TDRD7Q8NHU6 1098 aaKnown RBP21.23■□□□□ 0.99
UBE3D-204ENST00000430071 HHIPL1Q96JK4 782 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 API5Q9BZZ5 524 aaKnown RBP21.23■□□□□ 0.99
UBE3D-204ENST00000430071 TSKSQ9UJT2 592 aa21.23■□□□□ 0.99
UBE3D-204ENST00000430071 IQSEC3Q9UPP2 1182 aaPredicted RBP21.23■□□□□ 0.99
UBE3D-204ENST00000430071 PITPNM2Q9BZ72 1349 aa21.22■□□□□ 0.99
UBE3D-204ENST00000430071 TNS4Q8IZW8 715 aa21.22■□□□□ 0.99
UBE3D-204ENST00000430071 C2orf69Q8N8R5 385 aa21.22■□□□□ 0.99
UBE3D-204ENST00000430071 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
UBE3D-204ENST00000430071 MROH5Q6ZUA9 1318 aa21.21■□□□□ 0.99
UBE3D-204ENST00000430071 PAPPA2Q9BXP8 1791 aa21.21■□□□□ 0.99
UBE3D-204ENST00000430071 FAM155AB1AL88 458 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-204ENST00000430071 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
UBE3D-204ENST00000430071 TRIM27P14373 513 aa21.21■□□□□ 0.99
UBE3D-204ENST00000430071 CTCFP49711 727 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-204ENST00000430071 MAP2K1Q02750 393 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-204ENST00000430071 PTPN12Q05209 780 aaKnown RBP21.21■□□□□ 0.99
UBE3D-204ENST00000430071 METTL24Q5JXM2 366 aa21.21■□□□□ 0.99
UBE3D-204ENST00000430071 ATF7IPQ6VMQ6 1270 aa21.21■□□□□ 0.99
UBE3D-204ENST00000430071 MEIS3Q99687 375 aa21.21■□□□□ 0.99
UBE3D-204ENST00000430071 HIBADHP31937 336 aaKnown RBP21.2■□□□□ 0.98
UBE3D-204ENST00000430071 GRIK5Q16478 980 aa21.2■□□□□ 0.98
UBE3D-204ENST00000430071 LRRFIP2Q9Y608 721 aaKnown RBP21.2■□□□□ 0.98
UBE3D-204ENST00000430071 FAM205AQ6ZU69 1335 aa21.19■□□□□ 0.98
UBE3D-204ENST00000430071 UBTFL1P0CB47 393 aaPredicted RBP21.19■□□□□ 0.98
UBE3D-204ENST00000430071 MAP2K2P36507 400 aa21.19■□□□□ 0.98
UBE3D-204ENST00000430071 ZKSCAN2Q63HK3 967 aa21.19■□□□□ 0.98
UBE3D-204ENST00000430071 RGMBQ6NW40 437 aa21.19■□□□□ 0.98
UBE3D-204ENST00000430071 ATG9AQ7Z3C6 839 aa21.19■□□□□ 0.98
UBE3D-204ENST00000430071 FBXO33Q7Z6M2 555 aa21.19■□□□□ 0.98
UBE3D-204ENST00000430071 HDAC9Q9UKV0 1011 aa21.19■□□□□ 0.98
UBE3D-204ENST00000430071 PDE8BO95263 885 aa21.18■□□□□ 0.98
UBE3D-204ENST00000430071 CLUAP1Q96AJ1 413 aa21.18■□□□□ 0.98
UBE3D-204ENST00000430071 EYA2O00167 538 aa21.17■□□□□ 0.98
UBE3D-204ENST00000430071 BCAMP50895 628 aa21.17■□□□□ 0.98
UBE3D-204ENST00000430071 CFAP100Q494V2 611 aa21.17■□□□□ 0.98
UBE3D-204ENST00000430071 PRMT6Q96LA8 375 aaPredicted RBP21.17■□□□□ 0.98
UBE3D-204ENST00000430071 SIL1Q9H173 461 aa21.17■□□□□ 0.98
UBE3D-204ENST00000430071 PRDM10Q9NQV6 1147 aa21.17■□□□□ 0.98
UBE3D-204ENST00000430071 FZD1Q9UP38 647 aa21.17■□□□□ 0.98
UBE3D-204ENST00000430071 PA2G4Q9UQ80 394 aaKnown RBP21.17■□□□□ 0.98
UBE3D-204ENST00000430071 UBE2Q2LH0YL09 131 aa21.16■□□□□ 0.98
UBE3D-204ENST00000430071 FGFR2P21802 821 aa21.16■□□□□ 0.98
UBE3D-204ENST00000430071 ZNF157P51786 506 aaPredicted RBP21.16■□□□□ 0.98
UBE3D-204ENST00000430071 FKBP1AP62942 108 aaKnown RBP21.16■□□□□ 0.98
UBE3D-204ENST00000430071 DLGAP5Q15398 846 aa21.16■□□□□ 0.98
UBE3D-204ENST00000430071 CLRN2A0PK11 232 aa21.15■□□□□ 0.98
UBE3D-204ENST00000430071 CAPN15O75808 1086 aa21.15■□□□□ 0.98
UBE3D-204ENST00000430071 MFSD14BQ5SR56 506 aa21.15■□□□□ 0.98
UBE3D-204ENST00000430071 INTS3Q68E01 1043 aaKnown RBP21.15■□□□□ 0.98
UBE3D-204ENST00000430071 MTMR14Q8NCE2 650 aa21.15■□□□□ 0.98
UBE3D-204ENST00000430071 RLBP1P12271 317 aa21.14■□□□□ 0.98
UBE3D-204ENST00000430071 CHAF1AQ13111 956 aaPredicted RBP21.14■□□□□ 0.98
UBE3D-204ENST00000430071 PRKG1Q13976 671 aa21.14■□□□□ 0.98
UBE3D-204ENST00000430071 SPDYE2BA6NHP3 402 aa21.13■□□□□ 0.97
UBE3D-204ENST00000430071 SLC10A3P09131 477 aa21.13■□□□□ 0.97
UBE3D-204ENST00000430071 SPDYE6P0CI01 402 aa21.13■□□□□ 0.97
UBE3D-204ENST00000430071 KIF23Q02241 960 aaPredicted RBP21.13■□□□□ 0.97
UBE3D-204ENST00000430071 NOGQ13253 232 aa21.13■□□□□ 0.97
UBE3D-204ENST00000430071 SSC5DA1L4H1 1573 aa21.12■□□□□ 0.97
UBE3D-204ENST00000430071 MMP14P50281 582 aa21.12■□□□□ 0.97
UBE3D-204ENST00000430071 RASAL3Q86YV0 1011 aa21.12■□□□□ 0.97
UBE3D-204ENST00000430071 TTF2Q9UNY4 1162 aaKnown RBP21.12■□□□□ 0.97
UBE3D-204ENST00000430071 OTOFQ9HC10 1997 aa21.12■□□□□ 0.97
UBE3D-204ENST00000430071 RBM5P52756 815 aaKnown RBP eCLIP21.11■□□□□ 0.97
UBE3D-204ENST00000430071 VPS37DQ86XT2 251 aa21.11■□□□□ 0.97
UBE3D-204ENST00000430071 APOBEC3FQ8IUX4 373 aaKnown RBP21.11■□□□□ 0.97
UBE3D-204ENST00000430071 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
UBE3D-204ENST00000430071 TMEM57Q8N5G2 664 aa21.11■□□□□ 0.97
UBE3D-204ENST00000430071 PUM3Q15397 648 aaKnown RBP21.1■□□□□ 0.97
UBE3D-204ENST00000430071 PANK1Q8TE04 598 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 CCDC102AQ96A19 550 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 BEGAINQ9BUH8 593 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 DEFB129Q9H1M3 183 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 COL1A1P02452 1464 aaPredicted RBP21.1■□□□□ 0.97
UBE3D-204ENST00000430071 AK9Q5TCS8 1911 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 MYH2Q9UKX2 1941 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 TTLL12Q14166 644 aaPredicted RBP21.1■□□□□ 0.97
UBE3D-204ENST00000430071 CAVIN4Q5BKX8 364 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 FTSJ3Q8IY81 847 aaKnown RBP21.1■□□□□ 0.97
UBE3D-204ENST00000430071 TDRD3Q9H7E2 651 aaKnown RBP21.1■□□□□ 0.97
UBE3D-204ENST00000430071 VEZTQ9HBM0 779 aa21.1■□□□□ 0.97
UBE3D-204ENST00000430071 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.1■□□□□ 0.97
UBE3D-204ENST00000430071 IFIT1P09914 478 aaKnown RBP21.09■□□□□ 0.97
UBE3D-204ENST00000430071 FKBP1BP68106 108 aa21.09■□□□□ 0.97
UBE3D-204ENST00000430071 CSRNP1Q96S65 589 aa21.09■□□□□ 0.97
UBE3D-204ENST00000430071 FRAT2O75474 233 aaPredicted RBP21.08■□□□□ 0.96
UBE3D-204ENST00000430071 CRKP46108 304 aa21.08■□□□□ 0.96
UBE3D-204ENST00000430071 C20orf194Q5TEA3 1177 aa21.08■□□□□ 0.96
UBE3D-204ENST00000430071 CDAN1Q8IWY9 1227 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms