RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 LINC00116Q8NCU8 138 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 RNF214Q8ND24 703 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 SMC1BQ8NDV3 1235 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 PRIMPOLQ96LW4 560 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 SCAND2PQ9GZW5 306 aaPredicted RBP10.31□□□□□ -0.76
GABPB1-205ENST00000429662 R3HCC1Q9Y3T6 440 aaKnown RBP10.31□□□□□ -0.76
GABPB1-205ENST00000429662 MRC1P22897 1456 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 POTECB2RU33 542 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 SLC27A2O14975 620 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 CAVIN2O95810 425 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 MMP10P09238 476 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 CCDC192P0DO97 292 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 DPEP1P16444 411 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 RGS19P49795 217 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 TGFB2P61812 414 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
GABPB1-205ENST00000429662 RIC3Q7Z5B4 369 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 PIBF1Q8WXW3 757 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 DCAF5Q96JK2 942 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 COPRSQ9NQ92 184 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 PRDM10Q9NQV6 1147 aa10.3□□□□□ -0.76
GABPB1-205ENST00000429662 DICER1Q9UPY3 1922 aaKnown RBP10.3□□□□□ -0.76
GABPB1-205ENST00000429662 SASH1O94885 1247 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 ATP5JP18859 108 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 RPS6KB1P23443 525 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 NMIQ13287 307 aaPredicted RBP10.29□□□□□ -0.76
GABPB1-205ENST00000429662 USPL1Q5W0Q7 1092 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 ARHGAP27Q6ZUM4 889 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 ZCRB1Q8TBF4 217 aaKnown RBP10.29□□□□□ -0.76
GABPB1-205ENST00000429662 EAF2Q96CJ1 260 aaPredicted RBP10.29□□□□□ -0.76
GABPB1-205ENST00000429662 CHAMP1Q96JM3 812 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 FSD1Q9BTV5 496 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 FUCA2Q9BTY2 467 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 METTL22Q9BUU2 404 aaPredicted RBP10.29□□□□□ -0.76
GABPB1-205ENST00000429662 BICC1Q9H694 974 aaKnown RBP10.29□□□□□ -0.76
GABPB1-205ENST00000429662 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 MED23Q9ULK4 1368 aa10.29□□□□□ -0.76
GABPB1-205ENST00000429662 FIBPO43427 364 aa10.28□□□□□ -0.76
GABPB1-205ENST00000429662 ADCY5O95622 1261 aa10.28□□□□□ -0.76
GABPB1-205ENST00000429662 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
GABPB1-205ENST00000429662 ITPK1Q13572 414 aa10.28□□□□□ -0.76
GABPB1-205ENST00000429662 ME3Q16798 604 aa10.28□□□□□ -0.76
GABPB1-205ENST00000429662 ADCK5Q3MIX3 580 aa10.28□□□□□ -0.76
GABPB1-205ENST00000429662 DDX19AQ9NUU7 478 aaKnown RBP10.28□□□□□ -0.76
GABPB1-205ENST00000429662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.28□□□□□ -0.763e-6■■■■□ 21.7
GABPB1-205ENST00000429662 NRXN2Q9P2S2 1712 aa10.28□□□□□ -0.76
GABPB1-205ENST00000429662 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 VPS37CA5D8V6 355 aaPredicted RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 NEURL1BA8MQ27 555 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 ANXA1P04083 346 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 UQCRHP07919 91 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 HMGB1P09429 215 aaKnown RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 TATP17735 454 aaPredicted RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 DNM1Q05193 864 aaKnown RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 GCKRQ14397 625 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 PDIA6Q15084 440 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 CWF19L2Q2TBE0 894 aaKnown RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 ZNF790Q6PG37 636 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 RAPGEF4Q8WZA2 1011 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 ABHD8Q96I13 439 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 LLPHQ9BRT6 129 aaKnown RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 ZSCAN16Q9H4T2 348 aaPredicted RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 SLC52A2Q9HAB3 445 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 SPTLC3Q9NUV7 552 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 PA2G4Q9UQ80 394 aaKnown RBP10.27□□□□□ -0.76
GABPB1-205ENST00000429662 KIF3AQ9Y496 699 aa10.27□□□□□ -0.76
GABPB1-205ENST00000429662 ADAMTSL1Q8N6G6 1762 aa10.27□□□□□ -0.77
GABPB1-205ENST00000429662 AFDNP55196 1824 aaKnown RBP10.27□□□□□ -0.77
GABPB1-205ENST00000429662 GOLGA6L4A6NEF3 574 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 RIOK3O14730 519 aaKnown RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 LARGE1O95461 756 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 SNRPA1P09661 255 aaKnown RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 NOLC1Q14978 699 aaKnown RBP eCLIP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 MAP3K11Q16584 847 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 PROSER3Q2NL68 480 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 FOXD4L6Q3SYB3 417 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 ATL3Q6DD88 541 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 FOXD4L3Q6VB84 417 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 FAM200AQ8TCP9 573 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 KAZALD1Q96I82 304 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 AK7Q96M32 723 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 NUP62CLQ9H1M0 184 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 RNF181Q9P0P0 153 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 TPCN1Q9ULQ1 816 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 CNTNAP1P78357 1384 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 SIPA1L3O60292 1781 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 CYP27B1O15528 508 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 IGKV5-2P06315 115 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 RABL6Q3YEC7 729 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 ANKRD13DQ6ZTN6 518 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 IFNL2Q8IZJ0 200 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 MYRIPQ8NFW9 859 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms