RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CAMK4Q16566 473 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 NCAPG2Q86XI2 1143 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 RBM12BQ8IXT5 1001 aaKnown RBP10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 CKAP2LQ8IYA6 745 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 PARD3BQ8TEW8 1205 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 PLEKHA4Q9H4M7 779 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 VIPAS39Q9H9C1 493 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 TRIM35Q9UPQ4 493 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 IL16Q14005 1332 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 METP08581 1390 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 KNDC1Q76NI1 1749 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 SSH2Q76I76 1423 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 NPHP3Q7Z494 1330 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 EZRP15311 586 aaKnown RBP10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 SFPQP23246 707 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 CCT5P48643 541 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 PLCB4Q15147 1175 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 NFXL1Q6ZNB6 911 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 FCHSD1Q86WN1 690 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 MSANTD4Q8NCY6 345 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 ARHGAP45Q92619 1136 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 STK31Q9BXU1 1019 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 KLC4Q9NSK0 619 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 DACT1Q9NYF0 836 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 MAP2P11137 1827 aaKnown RBP10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 FAM135BQ49AJ0 1406 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 RTN3O95197 1032 aaPredicted RBP10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 ARHGAP25P42331 645 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 CEP85LQ5SZL2 805 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 B4GALNT4Q76KP1 1039 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 LRRC7Q96NW7 1537 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 CPSF1Q10570 1443 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 SHTN1A0MZ66 631 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 GOLGA6L9A6NEM1 432 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 H7C1W4 665 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 CASP8Q14790 479 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 SF3A1Q15459 793 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 AMOTQ4VCS5 1084 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 DNAJC14Q6Y2X3 702 aaPredicted RBP10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 RINLQ6ZS11 566 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 BRAPQ7Z569 592 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 YTHDF3Q7Z739 585 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 KDRP35968 1356 aa10.16□□□□□ -0.78
CDC42BPA-206ENST00000429440 FANCGO15287 622 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 PRPF6O94906 941 aaKnown RBP10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 TMPOP42166 694 aaKnown RBP10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 KRT85P78386 507 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 ILDR1Q86SU0 546 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 OR8K1Q8NGG5 319 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 PIK3R5Q8WYR1 880 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 MTMR6Q9Y217 621 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 MYO1FO00160 1098 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 ZSCAN12O43309 604 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 RASSF9O75901 435 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 FBLN1P23142 703 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 C3orf20Q8ND61 904 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 SYTL4Q96C24 671 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 NAT10Q9H0A0 1025 aaKnown RBP10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 DDX20Q9UHI6 824 aaKnown RBP10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 MON2Q7Z3U7 1717 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 UBR1Q8IWV7 1749 aa10.15□□□□□ -0.78
CDC42BPA-206ENST00000429440 TECPR2O15040 1411 aa10.15□□□□□ -0.79
CDC42BPA-206ENST00000429440 BECN2A8MW95 431 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 RNF40O75150 1001 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 NAA25Q14CX7 972 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 ARMCX5Q6P1M9 558 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 ARMCX6Q7L4S7 300 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 TSR2Q969E8 191 aaKnown RBP10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 ZBTB10Q96DT7 871 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 SPDL1Q96EA4 605 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 ZNF232Q9UNY5 417 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 TTC21AQ8NDW8 1320 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 A6NNZ2 444 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 KIAA0754O94854 1291 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 SNX1Q13596 522 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 STX1AQ16623 288 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 TUBB8Q3ZCM7 444 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 TTLL7Q6ZT98 887 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 HDGFL2Q7Z4V5 671 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 HOOK2Q96ED9 719 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 IRX2Q9BZI1 471 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 SCAND2PQ9GZW5 306 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 BLOC1S6Q9UL45 172 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 CPS1P31327 1500 aa10.14□□□□□ -0.79
CDC42BPA-206ENST00000429440 MEFVO15553 781 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 AHCYL1O43865 530 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 FESP07332 822 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 SLC8A1P32418 973 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 IRAK1P51617 712 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 HHATQ5VTY9 493 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 LMBR1Q8WVP7 490 aa10.13□□□□□ -0.79
CDC42BPA-206ENST00000429440 CCDC97Q96F63 343 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms