RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KIAA2012Q0VF49 1180 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 ZNF710Q8N1W2 664 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 EAF2Q96CJ1 260 aaPredicted RBP13.62□□□□□ -0.23
CECR3-201ENST00000428828 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
CECR3-201ENST00000428828 TLR7Q9NYK1 1049 aaKnown RBP13.62□□□□□ -0.23
CECR3-201ENST00000428828 ATP6V0A2Q9Y487 856 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 FER1L6Q2WGJ9 1857 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 DUOX1Q9NRD9 1551 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 A0A1B0GUL7 405 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
CECR3-201ENST00000428828 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 SP8Q8IXZ3 490 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 GPR101Q96P66 508 aaPredicted RBP13.62□□□□□ -0.23
CECR3-201ENST00000428828 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 XDHP47989 1333 aa13.61□□□□□ -0.23
CECR3-201ENST00000428828 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
CECR3-201ENST00000428828 DALRD3Q5D0E6 543 aaKnown RBP13.61□□□□□ -0.23
CECR3-201ENST00000428828 TSHZ3Q63HK5 1081 aa13.61□□□□□ -0.23
CECR3-201ENST00000428828 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
CECR3-201ENST00000428828 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
CECR3-201ENST00000428828 UFL1O94874 794 aa13.6□□□□□ -0.23
CECR3-201ENST00000428828 ADORA1P30542 326 aa13.6□□□□□ -0.23
CECR3-201ENST00000428828 GABPB1Q06547 395 aaPredicted RBP13.6□□□□□ -0.23
CECR3-201ENST00000428828 ZSCAN23Q3MJ62 389 aa13.6□□□□□ -0.23
CECR3-201ENST00000428828 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
CECR3-201ENST00000428828 SLC5A1P13866 664 aa13.6□□□□□ -0.23
CECR3-201ENST00000428828 KLRK1P26718 216 aa13.6□□□□□ -0.23
CECR3-201ENST00000428828 MFAP1P55081 439 aaKnown RBP13.6□□□□□ -0.23
CECR3-201ENST00000428828 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
CECR3-201ENST00000428828 DBNDD2Q9BQY9 259 aa13.6□□□□□ -0.23
CECR3-201ENST00000428828 ZNF804BA4D1E1 1349 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
CECR3-201ENST00000428828 C6orf229H3BNL8 230 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 FAM193AP78312 1265 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 MPNDQ8N594 471 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 XAGE2Q96GT9 111 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 RBSNQ9H1K0 784 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 GPR108Q9NPR9 543 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 DBNLQ9UJU6 430 aaKnown RBP13.59□□□□□ -0.23
CECR3-201ENST00000428828 GGA1Q9UJY5 639 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 CHD4Q14839 1912 aa13.59□□□□□ -0.23
CECR3-201ENST00000428828 IFIT1P09914 478 aaKnown RBP13.58□□□□□ -0.23
CECR3-201ENST00000428828 MX1P20591 662 aa13.58□□□□□ -0.23
CECR3-201ENST00000428828 GORABQ5T7V8 394 aa13.58□□□□□ -0.23
CECR3-201ENST00000428828 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.23
CECR3-201ENST00000428828 LPIN2Q92539 896 aa13.58□□□□□ -0.23
CECR3-201ENST00000428828 KIF3AQ9Y496 699 aa13.58□□□□□ -0.23
CECR3-201ENST00000428828 AKAP11Q9UKA4 1901 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
CECR3-201ENST00000428828 FGFR2P21802 821 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 NUCB2P80303 420 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 CBX1P83916 185 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 UBE4AQ14139 1066 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 CCDC93Q567U6 631 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 TBC1D16Q8TBP0 767 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 POLLQ9UGP5 575 aa13.58□□□□□ -0.24
CECR3-201ENST00000428828 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
CECR3-201ENST00000428828 GYG1P46976 350 aa13.57□□□□□ -0.24
CECR3-201ENST00000428828 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
CECR3-201ENST00000428828 ZNF830Q96NB3 372 aaPredicted RBP13.57□□□□□ -0.24
CECR3-201ENST00000428828 LEMD3Q9Y2U8 911 aa13.57□□□□□ -0.24
CECR3-201ENST00000428828 CDK11BP21127 795 aaKnown RBP13.56□□□□□ -0.24
CECR3-201ENST00000428828 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 TXNRD3Q86VQ6 643 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 PLEKHM2Q8IWE5 1019 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
CECR3-201ENST00000428828 SNED1Q8TER0 1413 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 TTC39AQ5SRH9 613 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 LRSAM1Q6UWE0 723 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 ANKRD7Q92527 254 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 SPTLC3Q9NUV7 552 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 IQSEC3Q9UPP2 1182 aaPredicted RBP13.56□□□□□ -0.24
CECR3-201ENST00000428828 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 UTRNP46939 3433 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 MYH7P12883 1935 aa13.56□□□□□ -0.24
CECR3-201ENST00000428828 SBF1O95248 1867 aa13.55□□□□□ -0.24
CECR3-201ENST00000428828 CCDC66A2RUB6 948 aa13.55□□□□□ -0.24
CECR3-201ENST00000428828 PHKA1P46020 1223 aa13.55□□□□□ -0.24
CECR3-201ENST00000428828 BCAMP50895 628 aa13.55□□□□□ -0.24
CECR3-201ENST00000428828 PDE1AP54750 535 aa13.55□□□□□ -0.24
CECR3-201ENST00000428828 VPS37DQ86XT2 251 aa13.55□□□□□ -0.24
CECR3-201ENST00000428828 CYP2E1P05181 493 aaPredicted RBP13.54□□□□□ -0.24
CECR3-201ENST00000428828 SYCP1Q15431 976 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 CAVIN4Q5BKX8 364 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 CCDC158Q5M9N0 1113 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 CCDC102BQ68D86 513 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 CREBRFQ8IUR6 639 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
CECR3-201ENST00000428828 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
CECR3-201ENST00000428828 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
CECR3-201ENST00000428828 PDCL2Q8N4E4 241 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms