RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 PRELPP51888 382 aa13.14□□□□□ -0.31
CRIM1-204ENST00000428774 RASSF7Q02833 373 aa13.14□□□□□ -0.31
CRIM1-204ENST00000428774 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
CRIM1-204ENST00000428774 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
CRIM1-204ENST00000428774 DIAPH3Q9NSV4 1193 aa13.14□□□□□ -0.31
CRIM1-204ENST00000428774 COL4A5P29400 1685 aa13.14□□□□□ -0.31
CRIM1-204ENST00000428774 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
CRIM1-204ENST00000428774 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
CRIM1-204ENST00000428774 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
CRIM1-204ENST00000428774 SEMA3EO15041 775 aa13.13□□□□□ -0.31
CRIM1-204ENST00000428774 ZBTB22O15209 634 aa13.13□□□□□ -0.31
CRIM1-204ENST00000428774 GPR162Q16538 588 aa13.13□□□□□ -0.31
CRIM1-204ENST00000428774 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
CRIM1-204ENST00000428774 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
CRIM1-204ENST00000428774 GNL3LQ9NVN8 582 aaKnown RBP13.13□□□□□ -0.31
CRIM1-204ENST00000428774 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
CRIM1-204ENST00000428774 RAD50Q92878 1312 aa13.13□□□□□ -0.31
CRIM1-204ENST00000428774 LAMA4Q16363 1823 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 NFKBIEO00221 500 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 HIP1O00291 1037 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 SGSM2O43147 1006 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 CCDC93Q567U6 631 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
CRIM1-204ENST00000428774 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
CRIM1-204ENST00000428774 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
CRIM1-204ENST00000428774 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
CRIM1-204ENST00000428774 RIMBP2O15034 1052 aa13.11□□□□□ -0.31
CRIM1-204ENST00000428774 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
CRIM1-204ENST00000428774 CC2D2BQ6DHV5 1058 aa13.11□□□□□ -0.31
CRIM1-204ENST00000428774 TMX4Q9H1E5 349 aaPredicted RBP13.11□□□□□ -0.31
CRIM1-204ENST00000428774 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
CRIM1-204ENST00000428774 MAST3O60307 1309 aa13.11□□□□□ -0.31
CRIM1-204ENST00000428774 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
CRIM1-204ENST00000428774 IL1R1P14778 569 aa13.1□□□□□ -0.31
CRIM1-204ENST00000428774 ADD2P35612 726 aa13.1□□□□□ -0.31
CRIM1-204ENST00000428774 CHAF1AQ13111 956 aaPredicted RBP13.1□□□□□ -0.31
CRIM1-204ENST00000428774 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
CRIM1-204ENST00000428774 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
CRIM1-204ENST00000428774 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
CRIM1-204ENST00000428774 SEC62Q99442 399 aaKnown RBP13.1□□□□□ -0.31
CRIM1-204ENST00000428774 EYA3Q99504 573 aa13.1□□□□□ -0.31
CRIM1-204ENST00000428774 JAG2Q9Y219 1238 aa13.1□□□□□ -0.31
CRIM1-204ENST00000428774 LAMB1P07942 1786 aa13.09□□□□□ -0.31
CRIM1-204ENST00000428774 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
CRIM1-204ENST00000428774 M0R2C6 588 aa13.09□□□□□ -0.31
CRIM1-204ENST00000428774 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
CRIM1-204ENST00000428774 IDH1O75874 414 aaKnown RBP13.09□□□□□ -0.31
CRIM1-204ENST00000428774 CCDC129Q6ZRS4 1044 aa13.09□□□□□ -0.31
CRIM1-204ENST00000428774 RUFY2Q8WXA3 655 aa13.09□□□□□ -0.31
CRIM1-204ENST00000428774 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
CRIM1-204ENST00000428774 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
CRIM1-204ENST00000428774 SALL1Q9NSC2 1324 aa13.09□□□□□ -0.31
CRIM1-204ENST00000428774 TCRBV5S4A2TA0A5A2 114 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
CRIM1-204ENST00000428774 REC8O95072 547 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 ZFYP08048 801 aaPredicted RBP13.08□□□□□ -0.32
CRIM1-204ENST00000428774 PDE6AP16499 860 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 WASHC4Q2M389 1173 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 APPBP2Q92624 585 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.08□□□□□ -0.32
CRIM1-204ENST00000428774 COA1Q9GZY4 146 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
CRIM1-204ENST00000428774 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.32
CRIM1-204ENST00000428774 ANO2Q9NQ90 1003 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 ZNF277Q9NRM2 450 aaPredicted RBP13.08□□□□□ -0.32
CRIM1-204ENST00000428774 FOCADQ5VW36 1801 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 NAV1Q8NEY1 1877 aa13.08□□□□□ -0.32
CRIM1-204ENST00000428774 DDX60LQ5H9U9 1706 aaKnown RBP13.08□□□□□ -0.32
CRIM1-204ENST00000428774 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 AOC3Q16853 763 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 SOGA3Q5TF21 947 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 SUPT20HQ8NEM7 779 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 PSMD1Q99460 953 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 USP26Q9BXU7 913 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
CRIM1-204ENST00000428774 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 ABCF2Q9UG63 623 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 FAM205AQ6ZU69 1335 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 ZNF532Q9HCE3 1301 aa13.07□□□□□ -0.32
CRIM1-204ENST00000428774 ECM29Q5VYK3 1845 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 ECE2O60344 883 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
CRIM1-204ENST00000428774 PRDX5P30044 214 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 PTH1RQ03431 593 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 MAP3K12Q12852 859 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 UBE3CQ15386 1083 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 GRIK5Q16478 980 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 LRRFIP1Q32MZ4 808 aaKnown RBP13.06□□□□□ -0.32
CRIM1-204ENST00000428774 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 SLC9C2Q5TAH2 1124 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
CRIM1-204ENST00000428774 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms