RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 PUS3Q9BZE2 481 aaKnown RBP21.55■■□□□ 1.04
TRIM39-209ENST00000428728 BICC1Q9H694 974 aaKnown RBP21.55■■□□□ 1.04
TRIM39-209ENST00000428728 PTPRCP08575 1304 aa21.55■■□□□ 1.04
TRIM39-209ENST00000428728 IL1R1P14778 569 aa21.54■■□□□ 1.04
TRIM39-209ENST00000428728 DLGAP5Q15398 846 aa21.54■■□□□ 1.04
TRIM39-209ENST00000428728 SSH1Q8WYL5 1049 aa21.54■■□□□ 1.04
TRIM39-209ENST00000428728 ZBED3Q96IU2 234 aaPredicted RBP21.54■■□□□ 1.04
TRIM39-209ENST00000428728 PCDHAC2Q9Y5I4 1007 aa21.54■■□□□ 1.04
TRIM39-209ENST00000428728 UTYO14607 1347 aa21.54■■□□□ 1.04
TRIM39-209ENST00000428728 COL1A1P02452 1464 aaPredicted RBP21.53■■□□□ 1.04
TRIM39-209ENST00000428728 TRPA1O75762 1119 aa21.53■■□□□ 1.04
TRIM39-209ENST00000428728 PRKG1Q13976 671 aa21.53■■□□□ 1.04
TRIM39-209ENST00000428728 CSRNP1Q96S65 589 aa21.53■■□□□ 1.04
TRIM39-209ENST00000428728 SAGE1Q9NXZ1 904 aa21.53■■□□□ 1.04
TRIM39-209ENST00000428728 SLFN5Q08AF3 891 aa21.52■■□□□ 1.04
TRIM39-209ENST00000428728 MCOLN1Q9GZU1 580 aa21.52■■□□□ 1.04
TRIM39-209ENST00000428728 RNF186Q9NXI6 227 aa21.52■■□□□ 1.04
TRIM39-209ENST00000428728 OTOFQ9HC10 1997 aa21.52■■□□□ 1.04
TRIM39-209ENST00000428728 CCDC85CA6NKD9 419 aa21.51■■□□□ 1.03
TRIM39-209ENST00000428728 GYG1P46976 350 aa21.51■■□□□ 1.03
TRIM39-209ENST00000428728 DGKZQ13574 1117 aa21.51■■□□□ 1.03
TRIM39-209ENST00000428728 CFAP100Q494V2 611 aa21.51■■□□□ 1.03
TRIM39-209ENST00000428728 CDCA7LQ96GN5 454 aa21.51■■□□□ 1.03
TRIM39-209ENST00000428728 LAMB1P07942 1786 aa21.51■■□□□ 1.03
TRIM39-209ENST00000428728 CLRN2A0PK11 232 aa21.5■■□□□ 1.03
TRIM39-209ENST00000428728 UBE4AQ14139 1066 aa21.5■■□□□ 1.03
TRIM39-209ENST00000428728 ANKRD44Q8N8A2 993 aa21.5■■□□□ 1.03
TRIM39-209ENST00000428728 SSC5DA1L4H1 1573 aa21.49■■□□□ 1.03
TRIM39-209ENST00000428728 RBM5P52756 815 aaKnown RBP eCLIP21.49■■□□□ 1.03
TRIM39-209ENST00000428728 FKBP1AP62942 108 aaKnown RBP21.49■■□□□ 1.03
TRIM39-209ENST00000428728 MKRN3Q13064 507 aaKnown RBP21.49■■□□□ 1.03
TRIM39-209ENST00000428728 RABL6Q3YEC7 729 aaPredicted RBP21.49■■□□□ 1.03
TRIM39-209ENST00000428728 ARMC9Q7Z3E5 817 aa21.49■■□□□ 1.03
TRIM39-209ENST00000428728 MTMR14Q8NCE2 650 aa21.49■■□□□ 1.03
TRIM39-209ENST00000428728 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
TRIM39-209ENST00000428728 FZD1Q9UP38 647 aa21.49■■□□□ 1.03
TRIM39-209ENST00000428728 RIPOR2Q9Y4F9 1068 aa21.49■■□□□ 1.03
TRIM39-209ENST00000428728 MROH5Q6ZUA9 1318 aa21.49■■□□□ 1.03
TRIM39-209ENST00000428728 SPDYE2BA6NHP3 402 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 SPDYE6P0CI01 402 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 HIBADHP31937 336 aaKnown RBP21.48■■□□□ 1.03
TRIM39-209ENST00000428728 LRRC24Q50LG9 513 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 MFSD14BQ5SR56 506 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 DEFB129Q9H1M3 183 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 VEZTQ9HBM0 779 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 AOX1Q06278 1338 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 FAM205AQ6ZU69 1335 aa21.48■■□□□ 1.03
TRIM39-209ENST00000428728 MYO1BO43795 1136 aa21.47■■□□□ 1.03
TRIM39-209ENST00000428728 METTL24Q5JXM2 366 aa21.47■■□□□ 1.03
TRIM39-209ENST00000428728 TDRD7Q8NHU6 1098 aaKnown RBP21.47■■□□□ 1.03
TRIM39-209ENST00000428728 KLHDC4Q8TBB5 520 aa21.47■■□□□ 1.03
TRIM39-209ENST00000428728 FAM84BQ96KN1 310 aaPredicted RBP21.47■■□□□ 1.03
TRIM39-209ENST00000428728 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.47■■□□□ 1.03
TRIM39-209ENST00000428728 ANGEL1Q9UNK9 670 aaKnown RBP21.47■■□□□ 1.03
TRIM39-209ENST00000428728 IQSEC3Q9UPP2 1182 aaPredicted RBP21.47■■□□□ 1.03
TRIM39-209ENST00000428728 PTPN12Q05209 780 aaKnown RBP21.46■■□□□ 1.03
TRIM39-209ENST00000428728 ALDH1L2Q3SY69 923 aa21.46■■□□□ 1.03
TRIM39-209ENST00000428728 REM2Q8IYK8 340 aaPredicted RBP21.46■■□□□ 1.03
TRIM39-209ENST00000428728 PRMT6Q96LA8 375 aaPredicted RBP21.46■■□□□ 1.03
TRIM39-209ENST00000428728 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
TRIM39-209ENST00000428728 USP44Q9H0E7 712 aa21.45■■□□□ 1.02
TRIM39-209ENST00000428728 TTF2Q9UNY4 1162 aaKnown RBP21.45■■□□□ 1.02
TRIM39-209ENST00000428728 CHAF1AQ13111 956 aaPredicted RBP21.44■■□□□ 1.02
TRIM39-209ENST00000428728 PPP2R3BQ9Y5P8 575 aa21.44■■□□□ 1.02
TRIM39-209ENST00000428728 VGLL2Q8N8G2 317 aa21.43■■□□□ 1.02
TRIM39-209ENST00000428728 FRAT2O75474 233 aaPredicted RBP21.42■■□□□ 1.02
TRIM39-209ENST00000428728 PDE8BO95263 885 aa21.41■■□□□ 1.02
TRIM39-209ENST00000428728 TBC1D8O95759 1140 aa21.41■■□□□ 1.02
TRIM39-209ENST00000428728 CAVIN4Q5BKX8 364 aa21.41■■□□□ 1.02
TRIM39-209ENST00000428728 LDLRAD1Q5T700 205 aa21.41■■□□□ 1.02
TRIM39-209ENST00000428728 NBPF12Q5TAG4 269 aaPredicted RBP21.41■■□□□ 1.02
TRIM39-209ENST00000428728 FBXO33Q7Z6M2 555 aa21.41■■□□□ 1.02
TRIM39-209ENST00000428728 TRMT2AQ8IZ69 625 aaKnown RBP21.41■■□□□ 1.02
TRIM39-209ENST00000428728 PPP1R12BO60237 982 aaPredicted RBP21.4■■□□□ 1.02
TRIM39-209ENST00000428728 RASA3Q14644 834 aa21.4■■□□□ 1.02
TRIM39-209ENST00000428728 GRIK5Q16478 980 aa21.4■■□□□ 1.02
TRIM39-209ENST00000428728 SPDYE2Q495Y8 402 aa21.4■■□□□ 1.02
TRIM39-209ENST00000428728 CLMNQ96JQ2 1002 aa21.4■■□□□ 1.02
TRIM39-209ENST00000428728 TDRD3Q9H7E2 651 aaKnown RBP21.4■■□□□ 1.02
TRIM39-209ENST00000428728 SERPINA10Q9UK55 444 aa21.4■■□□□ 1.02
TRIM39-209ENST00000428728 SREBF2Q12772 1141 aa21.39■■□□□ 1.01
TRIM39-209ENST00000428728 SUPT20HL1Q3ZLR7 823 aa21.39■■□□□ 1.01
TRIM39-209ENST00000428728 SPRYD7Q5W111 196 aa21.39■■□□□ 1.01
TRIM39-209ENST00000428728 ZNF70Q9UC06 446 aaPredicted RBP21.39■■□□□ 1.01
TRIM39-209ENST00000428728 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
TRIM39-209ENST00000428728 UBTFL1P0CB47 393 aaPredicted RBP21.38■■□□□ 1.01
TRIM39-209ENST00000428728 CRKP46108 304 aa21.38■■□□□ 1.01
TRIM39-209ENST00000428728 TM4SF4P48230 202 aa21.38■■□□□ 1.01
TRIM39-209ENST00000428728 BCAMP50895 628 aa21.38■■□□□ 1.01
TRIM39-209ENST00000428728 TNFAIP1Q13829 316 aa21.38■■□□□ 1.01
TRIM39-209ENST00000428728 PUM3Q15397 648 aaKnown RBP21.38■■□□□ 1.01
TRIM39-209ENST00000428728 MAP3K11Q16584 847 aa21.38■■□□□ 1.01
TRIM39-209ENST00000428728 DZIP1LQ8IYY4 767 aaKnown RBP21.38■■□□□ 1.01
TRIM39-209ENST00000428728 SLC10A4Q96EP9 437 aa21.38■■□□□ 1.01
TRIM39-209ENST00000428728 NOB1Q9ULX3 412 aaKnown RBP21.38■■□□□ 1.01
TRIM39-209ENST00000428728 AK9Q5TCS8 1911 aa21.37■■□□□ 1.01
TRIM39-209ENST00000428728 IFIT1P09914 478 aaKnown RBP21.37■■□□□ 1.01
TRIM39-209ENST00000428728 CT47B1P0C2W7 299 aaPredicted RBP21.37■■□□□ 1.01
TRIM39-209ENST00000428728 RFX5P48382 616 aaPredicted RBP21.37■■□□□ 1.01
TRIM39-209ENST00000428728 CTU1Q7Z7A3 348 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms