RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 LAMB2P55268 1798 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 FGD1P98174 961 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 ERFEQ4G0M1 354 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 BICDL1Q6ZP65 573 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 AMIGO3Q86WK7 504 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
NCBP2-205ENST00000428425 RASGRF1Q13972 1273 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 CCDC152Q4G0S7 254 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 DENND2AQ9ULE3 1009 aa16.42■□□□□ 0.22
NCBP2-205ENST00000428425 NCOA5Q9HCD5 579 aaKnown RBP16.41■□□□□ 0.22
NCBP2-205ENST00000428425 ZNF532Q9HCE3 1301 aa16.41■□□□□ 0.22
NCBP2-205ENST00000428425 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
NCBP2-205ENST00000428425 HMGB1P09429 215 aaKnown RBP16.41■□□□□ 0.22
NCBP2-205ENST00000428425 PDE6AP16499 860 aa16.41■□□□□ 0.22
NCBP2-205ENST00000428425 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
NCBP2-205ENST00000428425 LRRFIP1Q32MZ4 808 aaKnown RBP16.41■□□□□ 0.22
NCBP2-205ENST00000428425 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
NCBP2-205ENST00000428425 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
NCBP2-205ENST00000428425 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
NCBP2-205ENST00000428425 EP400Q96L91 3159 aa16.4■□□□□ 0.22
NCBP2-205ENST00000428425 BTAF1O14981 1849 aa16.4■□□□□ 0.22
NCBP2-205ENST00000428425 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
NCBP2-205ENST00000428425 TCRBV5S4A2TA0A5A2 114 aa16.4■□□□□ 0.22
NCBP2-205ENST00000428425 PFKFB2O60825 505 aa16.4■□□□□ 0.22
NCBP2-205ENST00000428425 BCAMP50895 628 aa16.4■□□□□ 0.22
NCBP2-205ENST00000428425 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
NCBP2-205ENST00000428425 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
NCBP2-205ENST00000428425 SRP68Q9UHB9 627 aaKnown RBP16.4■□□□□ 0.22
NCBP2-205ENST00000428425 CASZ1Q86V15 1759 aa16.39■□□□□ 0.22
NCBP2-205ENST00000428425 SLC5A1P13866 664 aa16.39■□□□□ 0.22
NCBP2-205ENST00000428425 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.22
NCBP2-205ENST00000428425 LRSAM1Q6UWE0 723 aa16.39■□□□□ 0.22
NCBP2-205ENST00000428425 SPATA5Q8NB90 893 aa16.39■□□□□ 0.22
NCBP2-205ENST00000428425 CHRNDQ07001 517 aa16.39■□□□□ 0.21
NCBP2-205ENST00000428425 NSUN7Q8NE18 718 aaKnown RBP16.39■□□□□ 0.21
NCBP2-205ENST00000428425 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
NCBP2-205ENST00000428425 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
NCBP2-205ENST00000428425 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
NCBP2-205ENST00000428425 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 IGHMBP2P38935 993 aaKnown RBP16.38■□□□□ 0.21
NCBP2-205ENST00000428425 FOSBP53539 338 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 TTF1Q15361 905 aaPredicted RBP16.38■□□□□ 0.21
NCBP2-205ENST00000428425 IMMTQ16891 758 aaKnown RBP16.38■□□□□ 0.21
NCBP2-205ENST00000428425 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
NCBP2-205ENST00000428425 THSD7AQ9UPZ6 1657 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 PDCP20941 246 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 ANTXR2P58335 489 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
NCBP2-205ENST00000428425 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
NCBP2-205ENST00000428425 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 PDIA3P30101 505 aaKnown RBP16.37■□□□□ 0.21
NCBP2-205ENST00000428425 UBE3CQ15386 1083 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 MB21D2Q8IYB1 491 aaPredicted RBP16.37■□□□□ 0.21
NCBP2-205ENST00000428425 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 CTNNA3Q9UI47 895 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 UBE2HP62256 183 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 TBC1D10CQ8IV04 446 aa16.37■□□□□ 0.21
NCBP2-205ENST00000428425 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.212e-14■■□□□ 11.6
NCBP2-205ENST00000428425 DOCK2Q92608 1830 aa16.36■□□□□ 0.21
NCBP2-205ENST00000428425 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
NCBP2-205ENST00000428425 ZSCAN25Q6NSZ9 544 aa16.36■□□□□ 0.21
NCBP2-205ENST00000428425 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
NCBP2-205ENST00000428425 RRAGDQ9NQL2 400 aaPredicted RBP16.36■□□□□ 0.21
NCBP2-205ENST00000428425 GNPATO15228 680 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 PRC1O43663 620 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 TFIP11Q9UBB9 837 aaKnown RBP16.35■□□□□ 0.21
NCBP2-205ENST00000428425 A0A1B0GUL6 1792 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 ZNF213O14771 459 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 APPP05067 770 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 RNF214Q8ND24 703 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
NCBP2-205ENST00000428425 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 NHSQ6T4R5 1651 aa16.35■□□□□ 0.21
NCBP2-205ENST00000428425 SALL1Q9NSC2 1324 aa16.34■□□□□ 0.21
NCBP2-205ENST00000428425 RESTQ13127 1097 aa16.34■□□□□ 0.21
NCBP2-205ENST00000428425 CELF1Q92879 486 aaKnown RBP16.34■□□□□ 0.21
NCBP2-205ENST00000428425 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
NCBP2-205ENST00000428425 MBD4O95243 580 aa16.34■□□□□ 0.21
NCBP2-205ENST00000428425 GYG1P46976 350 aa16.34■□□□□ 0.21
NCBP2-205ENST00000428425 ARMT1Q9H993 441 aa16.34■□□□□ 0.21
NCBP2-205ENST00000428425 CCNL1Q9UK58 526 aaPredicted RBP16.34■□□□□ 0.21
NCBP2-205ENST00000428425 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
NCBP2-205ENST00000428425 KRT85P78386 507 aa16.33■□□□□ 0.2
NCBP2-205ENST00000428425 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.2
NCBP2-205ENST00000428425 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
NCBP2-205ENST00000428425 LLPHQ9BRT6 129 aaKnown RBP16.33■□□□□ 0.2
NCBP2-205ENST00000428425 NARFQ9UHQ1 456 aa16.33■□□□□ 0.2
NCBP2-205ENST00000428425 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
NCBP2-205ENST00000428425 PRKAB2O43741 272 aa16.33■□□□□ 0.2
NCBP2-205ENST00000428425 RPS6KA4O75676 772 aa16.33■□□□□ 0.2
NCBP2-205ENST00000428425 MCM5P33992 734 aa16.33■□□□□ 0.2
NCBP2-205ENST00000428425 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms