RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 MYSM1Q5VVJ2 828 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 LINC00301Q8NCQ3 95 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 MPHOSPH8Q99549 860 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 RIMBP3CA6NJZ7 1639 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 RIMBP3BA6NNM3 1639 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 RIMBP3Q9UFD9 1639 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 TATP17735 454 aaPredicted RBP12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 HAND2P61296 217 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 ENGASEQ8NFI3 743 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 CEBPAP49715 358 aaPredicted RBP12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 E4F1Q66K89 784 aaPredicted RBP12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 HSP90B2PQ58FF3 399 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 JAKMIP3Q5VZ66 844 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 RFX7Q2KHR2 1363 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 EFCAB8A8MWE9 144 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 IKBKBO14920 756 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 ARHGAP6O43182 974 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 PRC1O43663 620 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 ERLIN1O75477 346 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 NPHP4O75161 1426 aaPredicted RBP12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 ADAMTS13Q76LX8 1427 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 ZNF213O14771 459 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 PNMA6AP0CW24 399 aaPredicted RBP12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 CMA1P23946 247 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 IL15P40933 162 aaPredicted RBP12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 ZNF790Q6PG37 636 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 LEKR1Q6ZMV7 388 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 L2HGDHQ9H9P8 463 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 PRAMEF22A3QJZ6 481 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 ATP8B1O43520 1251 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 IGKV5-2P06315 115 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 FBXO18Q8NFZ0 1043 aa12.4□□□□□ -0.42
ATP2C1-204ENST00000428331 EIF3JO75822 258 aaKnown RBP12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 PPFIBP1Q86W92 1011 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 CLIC4Q9Y696 253 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 ZFYP08048 801 aaPredicted RBP12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 HSPD1P10809 573 aaKnown RBP12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 KCNA6P17658 529 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 UTYO14607 1347 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 MYO1BO43795 1136 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 PFKFB1P16118 471 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 COL9A3Q14050 684 aaPredicted RBP12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 KCND1Q9NSA2 647 aa12.39□□□□□ -0.43
ATP2C1-204ENST00000428331 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 TIMM10P62072 90 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 ARMCX5Q6P1M9 558 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 BAG1Q99933 345 aaPredicted RBP12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■■■□ 20.6
ATP2C1-204ENST00000428331 PEAK1Q9H792 1746 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 CCDC12Q8WUD4 166 aaPredicted RBP12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 FILIP1LQ4L180 1135 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 GOLGA1Q92805 767 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 EPHA10Q5JZY3 1008 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 ZMYM1Q5SVZ6 1142 aa12.38□□□□□ -0.43
ATP2C1-204ENST00000428331 H2AFXP16104 143 aaPredicted RBP12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 STOX1Q6ZVD7 989 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 AKAP2Q9Y2D5 859 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 XRN1Q8IZH2 1706 aaKnown RBP12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 KIF5CO60282 957 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 GCP02774 474 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 PPP2R3AQ06190 1150 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 TICAM2Q86XR7 235 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 TMX1Q9H3N1 280 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 ZNF330Q9Y3S2 320 aaPredicted RBP12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 POTEB2H3BUK9 544 aa12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 METAP2P50579 478 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 EXOSC10Q01780 885 aaKnown RBP12.37□□□□□ -0.43
ATP2C1-204ENST00000428331 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 RIMS1Q86UR5 1692 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 ANKARQ7Z5J8 1434 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 CABP4P57796 275 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 SMARCE1Q969G3 411 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 ZNF609O15014 1411 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 FAM208AQ9UK61 1670 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 LMAN1P49257 510 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms