RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TOP1P11387 765 aaKnown RBP18.48■□□□□ 0.55
C9orf3-206ENST00000428313 UBASH3AP57075 661 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 MCM10Q7L590 875 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 CCDC12Q8WUD4 166 aaPredicted RBP18.48■□□□□ 0.55
C9orf3-206ENST00000428313 FBXW7Q969H0 707 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 LLPHQ9BRT6 129 aaKnown RBP18.48■□□□□ 0.55
C9orf3-206ENST00000428313 USP44Q9H0E7 712 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 CDC23Q9UJX2 597 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 DIP2CQ9Y2E4 1556 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 STK3Q13188 491 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
C9orf3-206ENST00000428313 TTLL5Q6EMB2 1281 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 EVI5LQ96CN4 794 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 USP28Q96RU2 1077 aa18.48■□□□□ 0.55
C9orf3-206ENST00000428313 BAG1Q99933 345 aaPredicted RBP18.48■□□□□ 0.55
C9orf3-206ENST00000428313 WDHD1O75717 1129 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-206ENST00000428313 ME1P48163 572 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 DDR1Q08345 913 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 ADALQ6DHV7 355 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 PPP1R42Q7Z4L9 355 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 HSD3B7Q9H2F3 369 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 NEDD4P46934 1319 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 MYO5BQ9ULV0 1848 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 EDC4Q6P2E9 1401 aaKnown RBP18.47■□□□□ 0.55
C9orf3-206ENST00000428313 CALRP27797 417 aaKnown RBP18.47■□□□□ 0.55
C9orf3-206ENST00000428313 IDI1Q13907 227 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 CDK19Q9BWU1 502 aa18.47■□□□□ 0.55
C9orf3-206ENST00000428313 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
C9orf3-206ENST00000428313 KIF3CO14782 793 aa18.46■□□□□ 0.55
C9orf3-206ENST00000428313 RNF40O75150 1001 aa18.46■□□□□ 0.55
C9orf3-206ENST00000428313 PRPF6O94906 941 aaKnown RBP18.46■□□□□ 0.55
C9orf3-206ENST00000428313 LMOD1P29536 600 aaPredicted RBP18.46■□□□□ 0.55
C9orf3-206ENST00000428313 LIG3P49916 1009 aa18.46■□□□□ 0.55
C9orf3-206ENST00000428313 PRPF38AQ8NAV1 312 aaKnown RBP18.46■□□□□ 0.55
C9orf3-206ENST00000428313 PLEKHA4Q9H4M7 779 aa18.46■□□□□ 0.55
C9orf3-206ENST00000428313 ATXN2Q99700 1313 aaKnown RBP18.46■□□□□ 0.55
C9orf3-206ENST00000428313 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
C9orf3-206ENST00000428313 JCADQ9P266 1359 aa18.46■□□□□ 0.55
C9orf3-206ENST00000428313 TBX2Q13207 712 aaPredicted RBP18.46■□□□□ 0.54
C9orf3-206ENST00000428313 LRCH2Q5VUJ6 765 aa18.46■□□□□ 0.54
C9orf3-206ENST00000428313 GBP6Q6ZN66 633 aa18.46■□□□□ 0.54
C9orf3-206ENST00000428313 FAM169AQ9Y6X4 670 aa18.46■□□□□ 0.54
C9orf3-206ENST00000428313 EBAG9O00559 213 aa18.45■□□□□ 0.54
C9orf3-206ENST00000428313 NBPF20Q3BBV1 942 aa18.45■□□□□ 0.54
C9orf3-206ENST00000428313 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
C9orf3-206ENST00000428313 GPATCH3Q96I76 525 aa18.45■□□□□ 0.54
C9orf3-206ENST00000428313 FTOQ9C0B1 505 aaKnown RBP eCLIP18.45■□□□□ 0.54
C9orf3-206ENST00000428313 SERPINC1P01008 464 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 SLC3A2P08195 630 aaKnown RBP18.44■□□□□ 0.54
C9orf3-206ENST00000428313 ATP1A3P13637 1013 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 COL9A3Q14050 684 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-206ENST00000428313 KRT32Q14532 448 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 GIMAP7Q8NHV1 300 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 TCEANC2Q96MN5 208 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 FMNL2Q96PY5 1086 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 SUGCTQ9HAC7 445 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 ECHDC1Q9NTX5 307 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 RBM28Q9NW13 759 aaKnown RBP18.44■□□□□ 0.54
C9orf3-206ENST00000428313 PCDHA7Q9UN72 937 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 VSNL1P62760 191 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 CFAP100Q494V2 611 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 DPF2Q92785 391 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 STK26Q9P289 416 aa18.44■□□□□ 0.54
C9orf3-206ENST00000428313 PHACTR2O75167 634 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 WDR93Q6P2C0 686 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 TOGARAM2Q6ZUX3 1019 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 LRRIQ3A6PVS8 624 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-206ENST00000428313 SYF2O95926 243 aaKnown RBP18.43■□□□□ 0.54
C9orf3-206ENST00000428313 GPTP24298 496 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 MYL5Q02045 173 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 NEDD9Q14511 834 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 FBXW10Q5XX13 1052 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 CABS1Q96KC9 395 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 ZSWIM4Q9H7M6 989 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 RTEL1Q9NZ71 1219 aa18.43■□□□□ 0.54
C9orf3-206ENST00000428313 PATL2C9JE40 543 aaKnown RBP18.42■□□□□ 0.54
C9orf3-206ENST00000428313 INPP5BP32019 993 aa18.42■□□□□ 0.54
C9orf3-206ENST00000428313 NDUFA8P51970 172 aa18.42■□□□□ 0.54
C9orf3-206ENST00000428313 WWC2Q6AWC2 1192 aa18.42■□□□□ 0.54
C9orf3-206ENST00000428313 PUF60Q9UHX1 559 aaKnown RBP18.42■□□□□ 0.54
C9orf3-206ENST00000428313 CDHR2Q9BYE9 1310 aa18.42■□□□□ 0.54
C9orf3-206ENST00000428313 GRIPAP1Q4V328 841 aa18.42■□□□□ 0.54
C9orf3-206ENST00000428313 CLIC6Q96NY7 704 aa18.42■□□□□ 0.54
C9orf3-206ENST00000428313 SBNO1A3KN83 1393 aa18.41■□□□□ 0.54
C9orf3-206ENST00000428313 A0A1B0GVL5 298 aa18.41■□□□□ 0.54
C9orf3-206ENST00000428313 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
C9orf3-206ENST00000428313 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
C9orf3-206ENST00000428313 NUTM2GQ5VZR2 741 aa18.41■□□□□ 0.54
C9orf3-206ENST00000428313 MIEF2Q96C03 454 aa18.41■□□□□ 0.54
C9orf3-206ENST00000428313 FAM212AQ96EL1 285 aa18.41■□□□□ 0.54
C9orf3-206ENST00000428313 MED23Q9ULK4 1368 aa18.41■□□□□ 0.54
C9orf3-206ENST00000428313 CCDC175P0C221 793 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 GOLGA8FQ08AF8 430 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 GOLGA8DPQ0D2H9 430 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 WHAMMP3Q1A5X7 153 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 MAP9Q49MG5 647 aa18.4■□□□□ 0.54
C9orf3-206ENST00000428313 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
C9orf3-206ENST00000428313 MCM8Q9UJA3 840 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms