RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 ARAP2Q8WZ64 1704 aa15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 VIL1P09327 827 aaKnown RBP15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 ARID4AP29374 1257 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 RSBN1LQ6PCB5 846 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 GPC2Q8N158 579 aa15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 ZNF512BQ96KM6 892 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 JAG2Q9Y219 1238 aa15.74■□□□□ 0.11
CCHCR1-205ENST00000428174 KDM2BQ8NHM5 1336 aa15.73■□□□□ 0.11
CCHCR1-205ENST00000428174 RASGRF1Q13972 1273 aa15.73■□□□□ 0.11
CCHCR1-205ENST00000428174 DACT2Q5SW24 774 aa15.73■□□□□ 0.11
CCHCR1-205ENST00000428174 GPATCH3Q96I76 525 aa15.73■□□□□ 0.11
CCHCR1-205ENST00000428174 SCN9AQ15858 1988 aa15.73■□□□□ 0.11
CCHCR1-205ENST00000428174 FKBP1AP62942 108 aaKnown RBP15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 SCARF1Q14162 830 aa15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 WDR66Q8TBY9 1149 aa15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 TBC1D22AQ8WUA7 517 aa15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 MXD3Q9BW11 206 aa15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 ECHDC1Q9NTX5 307 aa15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 HMG20BQ9P0W2 317 aa15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
CCHCR1-205ENST00000428174 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 ATP5JP18859 108 aa15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 RPS12P25398 132 aaKnown RBP15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 YY1P25490 414 aa15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 MCAMP43121 646 aa15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 GMPSP49915 693 aaPredicted RBP15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 SPATA5Q8NB90 893 aa15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 AGBL3Q8NEM8 1001 aa15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
CCHCR1-205ENST00000428174 PDS5AQ29RF7 1337 aaKnown RBP15.7■□□□□ 0.1
CCHCR1-205ENST00000428174 MX1P20591 662 aa15.7■□□□□ 0.1
CCHCR1-205ENST00000428174 MFSD14BQ5SR56 506 aa15.7■□□□□ 0.1
CCHCR1-205ENST00000428174 ZNF526Q8TF50 670 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-205ENST00000428174 DPF2Q92785 391 aa15.7■□□□□ 0.1
CCHCR1-205ENST00000428174 COL1A1P02452 1464 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-205ENST00000428174 TTC41PQ6P2S7 1318 aa15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 ZAP70P43403 619 aa15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 PI16Q6UXB8 463 aa15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 ZGPATQ8N5A5 531 aaKnown RBP15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 CERS5Q8N5B7 392 aa15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 L3MBTL3Q96JM7 780 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 GMLQ99445 158 aa15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
CCHCR1-205ENST00000428174 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 SALL1Q9NSC2 1324 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 ERC2O15083 957 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 SCNN1DP51172 638 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 TSHZ3Q63HK5 1081 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 KIAA0825Q8IV33 1275 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 DNAJC2Q99543 621 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 ABCF2Q9UG63 623 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 STAP2Q9UGK3 403 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 CNOT7Q9UIV1 285 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 SUGT1Q9Y2Z0 365 aa15.68■□□□□ 0.1
CCHCR1-205ENST00000428174 PSME4Q14997 1843 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 H7C1D1 291 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 GLRX3O76003 335 aaKnown RBP15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 PDE1AP54750 535 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 SPTY2D1Q68D10 685 aaPredicted RBP15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 HAUS7Q99871 368 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 GPRC5DQ9NZD1 345 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 HACL1Q9UJ83 578 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
CCHCR1-205ENST00000428174 IQCA1LA6NCM1 817 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 CYP2E1P05181 493 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 LDHBP07195 334 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 PDE4AP27815 886 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 GRIK5Q16478 980 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 TBC1D9Q6ZT07 1266 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 ERICH6Q7L0X2 663 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 PLEKHM2Q8IWE5 1019 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 MICALL2Q8IY33 904 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 PI4K2BQ8TCG2 481 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 RRAGCQ9HB90 399 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 TTF2Q9UNY4 1162 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 NDUFB9Q9Y6M9 179 aa15.66■□□□□ 0.1
CCHCR1-205ENST00000428174 MYH13Q9UKX3 1938 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 SHTN1A0MZ66 631 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 GOLIM4O00461 696 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 VEGFAP15692 232 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 PRDX5P30044 214 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 EPS15P42566 896 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 MMP14P50281 582 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 TTF1Q15361 905 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 GPBP1L1Q9HC44 474 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 NMRK2Q9NPI5 230 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 PIH1D3Q9NQM4 214 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
CCHCR1-205ENST00000428174 POTECB2RU33 542 aa15.64■□□□□ 0.09
CCHCR1-205ENST00000428174 EPHX2P34913 555 aa15.64■□□□□ 0.09
CCHCR1-205ENST00000428174 ZNF280AP59817 542 aaPredicted RBP15.64■□□□□ 0.09
CCHCR1-205ENST00000428174 OSBPL3Q9H4L5 887 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms