RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 VIL1P09327 827 aaKnown RBP18.51■□□□□ 0.55
VARS2-203ENST00000428017 RPS12P25398 132 aaKnown RBP18.51■□□□□ 0.55
VARS2-203ENST00000428017 ARID4AP29374 1257 aaPredicted RBP18.51■□□□□ 0.55
VARS2-203ENST00000428017 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
VARS2-203ENST00000428017 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
VARS2-203ENST00000428017 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
VARS2-203ENST00000428017 SBF1O95248 1867 aa18.51■□□□□ 0.55
VARS2-203ENST00000428017 TIAM2Q8IVF5 1701 aa18.51■□□□□ 0.55
VARS2-203ENST00000428017 FAM205AQ6ZU69 1335 aa18.5■□□□□ 0.55
VARS2-203ENST00000428017 LMOD1P29536 600 aaPredicted RBP18.5■□□□□ 0.55
VARS2-203ENST00000428017 GMPSP49915 693 aaPredicted RBP18.5■□□□□ 0.55
VARS2-203ENST00000428017 RASGRF1Q13972 1273 aa18.5■□□□□ 0.55
VARS2-203ENST00000428017 MFSD14BQ5SR56 506 aa18.5■□□□□ 0.55
VARS2-203ENST00000428017 DACT2Q5SW24 774 aa18.5■□□□□ 0.55
VARS2-203ENST00000428017 SPATA5Q8NB90 893 aa18.5■□□□□ 0.55
VARS2-203ENST00000428017 ZNF526Q8TF50 670 aaPredicted RBP18.5■□□□□ 0.55
VARS2-203ENST00000428017 ECHDC1Q9NTX5 307 aa18.5■□□□□ 0.55
VARS2-203ENST00000428017 MX1P20591 662 aa18.49■□□□□ 0.55
VARS2-203ENST00000428017 C16orf71Q8IYS4 520 aaPredicted RBP18.49■□□□□ 0.55
VARS2-203ENST00000428017 ZGPATQ8N5A5 531 aaKnown RBP18.49■□□□□ 0.55
VARS2-203ENST00000428017 AGBL3Q8NEM8 1001 aa18.49■□□□□ 0.55
VARS2-203ENST00000428017 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
VARS2-203ENST00000428017 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
VARS2-203ENST00000428017 ARAP2Q8WZ64 1704 aa18.49■□□□□ 0.55
VARS2-203ENST00000428017 PDS5AQ29RF7 1337 aaKnown RBP18.49■□□□□ 0.55
VARS2-203ENST00000428017 ERC2O15083 957 aa18.48■□□□□ 0.55
VARS2-203ENST00000428017 ZBTB22O15209 634 aa18.48■□□□□ 0.55
VARS2-203ENST00000428017 MCAMP43121 646 aa18.48■□□□□ 0.55
VARS2-203ENST00000428017 FKBP1AP62942 108 aaKnown RBP18.48■□□□□ 0.55
VARS2-203ENST00000428017 SNRKQ9NRH2 765 aa18.48■□□□□ 0.55
VARS2-203ENST00000428017 DICER1Q9UPY3 1922 aaKnown RBP18.48■□□□□ 0.55
VARS2-203ENST00000428017 CCDC88AQ3V6T2 1871 aa18.48■□□□□ 0.55
VARS2-203ENST00000428017 IQCA1LA6NCM1 817 aa18.47■□□□□ 0.55
VARS2-203ENST00000428017 ATP5JP18859 108 aa18.47■□□□□ 0.55
VARS2-203ENST00000428017 OGFOD1Q8N543 542 aa18.47■□□□□ 0.55
VARS2-203ENST00000428017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.47■□□□□ 0.55
VARS2-203ENST00000428017 DPF2Q92785 391 aa18.47■□□□□ 0.55
VARS2-203ENST00000428017 MXD3Q9BW11 206 aa18.47■□□□□ 0.55
VARS2-203ENST00000428017 HDAC9Q9UKV0 1011 aa18.47■□□□□ 0.55
VARS2-203ENST00000428017 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
VARS2-203ENST00000428017 UTRNP46939 3433 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 H7C1D1 291 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 USP17L8P0C7I0 530 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 SCARF1Q14162 830 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 SPTY2D1Q68D10 685 aaPredicted RBP18.46■□□□□ 0.55
VARS2-203ENST00000428017 PI16Q6UXB8 463 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 KIAA0825Q8IV33 1275 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 OTUD7AQ8TE49 926 aaPredicted RBP18.46■□□□□ 0.55
VARS2-203ENST00000428017 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
VARS2-203ENST00000428017 DNAJC2Q99543 621 aaKnown RBP18.46■□□□□ 0.55
VARS2-203ENST00000428017 GPBP1L1Q9HC44 474 aaPredicted RBP18.46■□□□□ 0.55
VARS2-203ENST00000428017 ABCF2Q9UG63 623 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 CHD4Q14839 1912 aa18.46■□□□□ 0.55
VARS2-203ENST00000428017 F8W031 263 aaPredicted RBP18.45■□□□□ 0.54
VARS2-203ENST00000428017 MICALL2Q8IY33 904 aa18.45■□□□□ 0.54
VARS2-203ENST00000428017 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
VARS2-203ENST00000428017 GPRC5DQ9NZD1 345 aa18.45■□□□□ 0.54
VARS2-203ENST00000428017 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
VARS2-203ENST00000428017 HACL1Q9UJ83 578 aa18.45■□□□□ 0.54
VARS2-203ENST00000428017 SUGT1Q9Y2Z0 365 aa18.45■□□□□ 0.54
VARS2-203ENST00000428017 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
VARS2-203ENST00000428017 COL1A1P02452 1464 aaPredicted RBP18.45■□□□□ 0.54
VARS2-203ENST00000428017 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
VARS2-203ENST00000428017 LDHBP07195 334 aaKnown RBP18.44■□□□□ 0.54
VARS2-203ENST00000428017 ZAP70P43403 619 aa18.44■□□□□ 0.54
VARS2-203ENST00000428017 MMP14P50281 582 aa18.44■□□□□ 0.54
VARS2-203ENST00000428017 SCNN1DP51172 638 aa18.44■□□□□ 0.54
VARS2-203ENST00000428017 TSHZ3Q63HK5 1081 aa18.44■□□□□ 0.54
VARS2-203ENST00000428017 CERS5Q8N5B7 392 aa18.44■□□□□ 0.54
VARS2-203ENST00000428017 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
VARS2-203ENST00000428017 TTF2Q9UNY4 1162 aaKnown RBP18.44■□□□□ 0.54
VARS2-203ENST00000428017 MAST3O60307 1309 aa18.44■□□□□ 0.54
VARS2-203ENST00000428017 VEGFAP15692 232 aaPredicted RBP18.43■□□□□ 0.54
VARS2-203ENST00000428017 PDE1AP54750 535 aa18.43■□□□□ 0.54
VARS2-203ENST00000428017 TTF1Q15361 905 aaPredicted RBP18.43■□□□□ 0.54
VARS2-203ENST00000428017 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
VARS2-203ENST00000428017 GMLQ99445 158 aa18.43■□□□□ 0.54
VARS2-203ENST00000428017 HAUS7Q99871 368 aa18.43■□□□□ 0.54
VARS2-203ENST00000428017 RRAGCQ9HB90 399 aa18.43■□□□□ 0.54
VARS2-203ENST00000428017 RAI14Q9P0K7 980 aa18.43■□□□□ 0.54
VARS2-203ENST00000428017 GOLIM4O00461 696 aa18.42■□□□□ 0.54
VARS2-203ENST00000428017 TBC1D9Q6ZT07 1266 aa18.42■□□□□ 0.54
VARS2-203ENST00000428017 DZIP1Q86YF9 867 aaKnown RBP18.42■□□□□ 0.54
VARS2-203ENST00000428017 STAP2Q9UGK3 403 aa18.42■□□□□ 0.54
VARS2-203ENST00000428017 CYP2E1P05181 493 aaPredicted RBP18.41■□□□□ 0.54
VARS2-203ENST00000428017 EPHX2P34913 555 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 EPS15P42566 896 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 RBM5P52756 815 aaKnown RBP eCLIP18.41■□□□□ 0.54
VARS2-203ENST00000428017 NMRK2Q9NPI5 230 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 ADARB2Q9NS39 739 aaKnown RBP18.41■□□□□ 0.54
VARS2-203ENST00000428017 PAG1Q9NWQ8 432 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 NDUFB9Q9Y6M9 179 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 AOX1Q06278 1338 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 SCN9AQ15858 1988 aa18.41■□□□□ 0.54
VARS2-203ENST00000428017 IDH1O75874 414 aaKnown RBP18.4■□□□□ 0.54
VARS2-203ENST00000428017 PRDX5P30044 214 aa18.4■□□□□ 0.54
VARS2-203ENST00000428017 ZNF280AP59817 542 aaPredicted RBP18.4■□□□□ 0.54
VARS2-203ENST00000428017 RBM26Q5T8P6 1007 aaKnown RBP18.4■□□□□ 0.54
VARS2-203ENST00000428017 PLEKHM2Q8IWE5 1019 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms