RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PRAMEF18Q5VWM3 479 aa23.1■■□□□ 1.29
PSPC1-202ENST00000427943 RGMBQ6NW40 437 aa23.1■■□□□ 1.29
PSPC1-202ENST00000427943 BEGAINQ9BUH8 593 aa23.1■■□□□ 1.29
PSPC1-202ENST00000427943 PRDM10Q9NQV6 1147 aa23.1■■□□□ 1.29
PSPC1-202ENST00000427943 METTL24Q5JXM2 366 aa23.09■■□□□ 1.29
PSPC1-202ENST00000427943 ZIC5Q96T25 663 aa23.09■■□□□ 1.29
PSPC1-202ENST00000427943 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
PSPC1-202ENST00000427943 AKAP11Q9UKA4 1901 aa23.09■■□□□ 1.29
PSPC1-202ENST00000427943 TSKSQ9UJT2 592 aa23.08■■□□□ 1.29
PSPC1-202ENST00000427943 PCDHAC2Q9Y5I4 1007 aa23.08■■□□□ 1.29
PSPC1-202ENST00000427943 FAM155AB1AL88 458 aaPredicted RBP23.07■■□□□ 1.28
PSPC1-202ENST00000427943 CAPN15O75808 1086 aa23.07■■□□□ 1.28
PSPC1-202ENST00000427943 UBTFL1P0CB47 393 aaPredicted RBP23.07■■□□□ 1.28
PSPC1-202ENST00000427943 HIBADHP31937 336 aaKnown RBP23.07■■□□□ 1.28
PSPC1-202ENST00000427943 MMP14P50281 582 aa23.07■■□□□ 1.28
PSPC1-202ENST00000427943 ZNF157P51786 506 aaPredicted RBP23.07■■□□□ 1.28
PSPC1-202ENST00000427943 BRPF1P55201 1214 aaPredicted RBP23.07■■□□□ 1.28
PSPC1-202ENST00000427943 NOGQ13253 232 aa23.07■■□□□ 1.28
PSPC1-202ENST00000427943 ZBED3Q96IU2 234 aaPredicted RBP23.07■■□□□ 1.28
PSPC1-202ENST00000427943 KIF16BQ96L93 1317 aa23.07■■□□□ 1.28
PSPC1-202ENST00000427943 FKBP1AP62942 108 aaKnown RBP23.06■■□□□ 1.28
PSPC1-202ENST00000427943 DLGAP5Q15398 846 aa23.06■■□□□ 1.28
PSPC1-202ENST00000427943 MOB2Q70IA6 237 aa23.06■■□□□ 1.28
PSPC1-202ENST00000427943 VGLL2Q8N8G2 317 aa23.06■■□□□ 1.28
PSPC1-202ENST00000427943 TDRD7Q8NHU6 1098 aaKnown RBP23.06■■□□□ 1.28
PSPC1-202ENST00000427943 FAM84BQ96KN1 310 aaPredicted RBP23.06■■□□□ 1.28
PSPC1-202ENST00000427943 FAM205AQ6ZU69 1335 aa23.06■■□□□ 1.28
PSPC1-202ENST00000427943 CASP8AP2Q9UKL3 1982 aa23.05■■□□□ 1.28
PSPC1-202ENST00000427943 RFX5P48382 616 aaPredicted RBP23.05■■□□□ 1.28
PSPC1-202ENST00000427943 APOBEC3FQ8IUX4 373 aaKnown RBP23.05■■□□□ 1.28
PSPC1-202ENST00000427943 IQSEC3Q9UPP2 1182 aaPredicted RBP23.05■■□□□ 1.28
PSPC1-202ENST00000427943 PDE8BO95263 885 aa23.04■■□□□ 1.28
PSPC1-202ENST00000427943 HNRNPUQ00839 825 aaKnown RBP eCLIP23.04■■□□□ 1.28
PSPC1-202ENST00000427943 CFAP100Q494V2 611 aa23.04■■□□□ 1.28
PSPC1-202ENST00000427943 SLC10A3P09131 477 aa23.03■■□□□ 1.28
PSPC1-202ENST00000427943 MFSD14BQ5SR56 506 aa23.03■■□□□ 1.28
PSPC1-202ENST00000427943 VPS37DQ86XT2 251 aa23.03■■□□□ 1.28
PSPC1-202ENST00000427943 CCDC102AQ96A19 550 aa23.03■■□□□ 1.28
PSPC1-202ENST00000427943 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
PSPC1-202ENST00000427943 COL1A1P02452 1464 aaPredicted RBP23.03■■□□□ 1.28
PSPC1-202ENST00000427943 FKBP1BP68106 108 aa23.02■■□□□ 1.28
PSPC1-202ENST00000427943 PTPN12Q05209 780 aaKnown RBP23.02■■□□□ 1.28
PSPC1-202ENST00000427943 TTLL12Q14166 644 aaPredicted RBP23.02■■□□□ 1.28
PSPC1-202ENST00000427943 MTMR14Q8NCE2 650 aa23.02■■□□□ 1.28
PSPC1-202ENST00000427943 MEIS3Q99687 375 aa23.02■■□□□ 1.28
PSPC1-202ENST00000427943 AOX1Q06278 1338 aa23.02■■□□□ 1.28
PSPC1-202ENST00000427943 CLRN2A0PK11 232 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 UBE2Q2LH0YL09 131 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 EYA2O00167 538 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 NF2P35240 595 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 RBM5P52756 815 aaKnown RBP eCLIP23.01■■□□□ 1.27
PSPC1-202ENST00000427943 KIF23Q02241 960 aaPredicted RBP23.01■■□□□ 1.27
PSPC1-202ENST00000427943 FBXO33Q7Z6M2 555 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 RASAL3Q86YV0 1011 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 SIL1Q9H173 461 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 TNNQ9UQP3 1299 aa23.01■■□□□ 1.27
PSPC1-202ENST00000427943 SPDYE2BA6NHP3 402 aa23■■□□□ 1.27
PSPC1-202ENST00000427943 BCAR3O75815 825 aa23■■□□□ 1.27
PSPC1-202ENST00000427943 SPDYE6P0CI01 402 aa23■■□□□ 1.27
PSPC1-202ENST00000427943 CHAF1AQ13111 956 aaPredicted RBP23■■□□□ 1.27
PSPC1-202ENST00000427943 PRKG1Q13976 671 aa23■■□□□ 1.27
PSPC1-202ENST00000427943 PUM3Q15397 648 aaKnown RBP23■■□□□ 1.27
PSPC1-202ENST00000427943 CAVIN4Q5BKX8 364 aa23■■□□□ 1.27
PSPC1-202ENST00000427943 PRMT6Q96LA8 375 aaPredicted RBP23■■□□□ 1.27
PSPC1-202ENST00000427943 TTF2Q9UNY4 1162 aaKnown RBP23■■□□□ 1.27
PSPC1-202ENST00000427943 CA12O43570 354 aa22.99■■□□□ 1.27
PSPC1-202ENST00000427943 FRAT2O75474 233 aaPredicted RBP22.99■■□□□ 1.27
PSPC1-202ENST00000427943 BCAMP50895 628 aa22.99■■□□□ 1.27
PSPC1-202ENST00000427943 ATG9AQ7Z3C6 839 aa22.99■■□□□ 1.27
PSPC1-202ENST00000427943 ARHGAP45Q92619 1136 aa22.99■■□□□ 1.27
PSPC1-202ENST00000427943 FRAT1Q92837 279 aaPredicted RBP22.99■■□□□ 1.27
PSPC1-202ENST00000427943 VEZTQ9HBM0 779 aa22.99■■□□□ 1.27
PSPC1-202ENST00000427943 SSC5DA1L4H1 1573 aa22.98■■□□□ 1.27
PSPC1-202ENST00000427943 MYO1BO43795 1136 aa22.98■■□□□ 1.27
PSPC1-202ENST00000427943 IFIT1P09914 478 aaKnown RBP22.98■■□□□ 1.27
PSPC1-202ENST00000427943 FGFR2P21802 821 aa22.98■■□□□ 1.27
PSPC1-202ENST00000427943 GRIK5Q16478 980 aa22.98■■□□□ 1.27
PSPC1-202ENST00000427943 INTS3Q68E01 1043 aaKnown RBP22.98■■□□□ 1.27
PSPC1-202ENST00000427943 DEFB129Q9H1M3 183 aa22.98■■□□□ 1.27
PSPC1-202ENST00000427943 OTOFQ9HC10 1997 aa22.98■■□□□ 1.27
PSPC1-202ENST00000427943 TRIM27P14373 513 aa22.97■■□□□ 1.27
PSPC1-202ENST00000427943 FZD1Q9UP38 647 aa22.97■■□□□ 1.27
PSPC1-202ENST00000427943 PA2G4Q9UQ80 394 aaKnown RBP22.97■■□□□ 1.27
PSPC1-202ENST00000427943 SLC5A1P13866 664 aa22.96■■□□□ 1.27
PSPC1-202ENST00000427943 CLUAP1Q96AJ1 413 aa22.95■■□□□ 1.26
PSPC1-202ENST00000427943 SERPINA10Q9UK55 444 aa22.95■■□□□ 1.26
PSPC1-202ENST00000427943 HDAC5Q9UQL6 1122 aa22.95■■□□□ 1.26
PSPC1-202ENST00000427943 IPO8O15397 1037 aaKnown RBP22.94■■□□□ 1.26
PSPC1-202ENST00000427943 CIAO1O76071 339 aa22.94■■□□□ 1.26
PSPC1-202ENST00000427943 ATF7IPQ6VMQ6 1270 aa22.94■■□□□ 1.26
PSPC1-202ENST00000427943 ARMC9Q7Z3E5 817 aa22.94■■□□□ 1.26
PSPC1-202ENST00000427943 LPIN2Q92539 896 aa22.94■■□□□ 1.26
PSPC1-202ENST00000427943 TDRD3Q9H7E2 651 aaKnown RBP22.94■■□□□ 1.26
PSPC1-202ENST00000427943 ANGEL1Q9UNK9 670 aaKnown RBP22.94■■□□□ 1.26
PSPC1-202ENST00000427943 GNAI3P08754 354 aa22.93■■□□□ 1.26
PSPC1-202ENST00000427943 CRKP46108 304 aa22.93■■□□□ 1.26
PSPC1-202ENST00000427943 ATP2B3Q16720 1220 aa22.93■■□□□ 1.26
PSPC1-202ENST00000427943 TBC1D22AQ8WUA7 517 aa22.93■■□□□ 1.26
PSPC1-202ENST00000427943 CSRNP1Q96S65 589 aa22.93■■□□□ 1.26
PSPC1-202ENST00000427943 FBXO3Q9UK99 471 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms