RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 RPS12P25398 132 aaKnown RBP11.11□□□□□ -0.63
LINC00963-204ENST00000427778 MAP2K2P36507 400 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 GMPSP49915 693 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-204ENST00000427778 SOX10P56693 466 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-204ENST00000427778 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 C15orf52Q6ZUT6 534 aaKnown RBP11.11□□□□□ -0.63
LINC00963-204ENST00000427778 USP50Q70EL3 339 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-204ENST00000427778 ANKRD44Q8N8A2 993 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 DPF2Q92785 391 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 SUCLG2Q96I99 432 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 DBNDD1Q9H9R9 158 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
LINC00963-204ENST00000427778 IRS2Q9Y4H2 1338 aa11.1□□□□□ -0.63
LINC00963-204ENST00000427778 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
LINC00963-204ENST00000427778 RAD17O75943 681 aa11.1□□□□□ -0.63
LINC00963-204ENST00000427778 EPS15P42566 896 aa11.1□□□□□ -0.63
LINC00963-204ENST00000427778 CHRNDQ07001 517 aa11.1□□□□□ -0.63
LINC00963-204ENST00000427778 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
LINC00963-204ENST00000427778 PODNQ7Z5L7 613 aa11.1□□□□□ -0.63
LINC00963-204ENST00000427778 OCEL1Q9H607 264 aa11.1□□□□□ -0.63
LINC00963-204ENST00000427778 BICC1Q9H694 974 aaKnown RBP11.1□□□□□ -0.63
LINC00963-204ENST00000427778 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
LINC00963-204ENST00000427778 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
LINC00963-204ENST00000427778 ZNF804BA4D1E1 1349 aa11.09□□□□□ -0.63
LINC00963-204ENST00000427778 ARAP2Q8WZ64 1704 aa11.09□□□□□ -0.63
LINC00963-204ENST00000427778 PSMD14O00487 310 aa11.09□□□□□ -0.63
LINC00963-204ENST00000427778 IPO8O15397 1037 aaKnown RBP11.09□□□□□ -0.63
LINC00963-204ENST00000427778 VIL1P09327 827 aaKnown RBP11.09□□□□□ -0.63
LINC00963-204ENST00000427778 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00963-204ENST00000427778 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
LINC00963-204ENST00000427778 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
LINC00963-204ENST00000427778 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
LINC00963-204ENST00000427778 TRIM27P14373 513 aa11.08□□□□□ -0.64
LINC00963-204ENST00000427778 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
LINC00963-204ENST00000427778 LDHAL6AQ6ZMR3 332 aa11.08□□□□□ -0.64
LINC00963-204ENST00000427778 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
LINC00963-204ENST00000427778 GMLQ99445 158 aa11.08□□□□□ -0.64
LINC00963-204ENST00000427778 COA1Q9GZY4 146 aa11.08□□□□□ -0.64
LINC00963-204ENST00000427778 PGAP2Q9UHJ9 254 aa11.08□□□□□ -0.64
LINC00963-204ENST00000427778 HDAC5Q9UQL6 1122 aa11.08□□□□□ -0.64
LINC00963-204ENST00000427778 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 TRAF5O00463 557 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 BCAR3O75815 825 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 UBTFL1P0CB47 393 aaPredicted RBP11.07□□□□□ -0.64
LINC00963-204ENST00000427778 NUBP1P53384 320 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 TAF7LQ5H9L4 462 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 CST9Q5W186 159 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 TXNRD3Q86VQ6 643 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 ZNF594Q96JF6 807 aaPredicted RBP11.07□□□□□ -0.64
LINC00963-204ENST00000427778 KCNQ5Q9NR82 932 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 CNOT7Q9UIV1 285 aaKnown RBP11.07□□□□□ -0.64
LINC00963-204ENST00000427778 RIPOR2Q9Y4F9 1068 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 MROH5Q6ZUA9 1318 aa11.07□□□□□ -0.64
LINC00963-204ENST00000427778 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 G3V3G9 751 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 H7C1D1 291 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 MMP14P50281 582 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
LINC00963-204ENST00000427778 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 STRIP1Q5VSL9 837 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
LINC00963-204ENST00000427778 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 MICALL2Q8IY33 904 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 MYO3BQ8WXR4 1341 aa11.06□□□□□ -0.64
LINC00963-204ENST00000427778 GNAI3P08754 354 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 KLRK1P26718 216 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 KCNJ4P48050 445 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 RFX5P48382 616 aaPredicted RBP11.05□□□□□ -0.64
LINC00963-204ENST00000427778 MTX1Q13505 466 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 UBE4AQ14139 1066 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 DACT2Q5SW24 774 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 ZKSCAN2Q63HK3 967 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 SAPCD2Q86UD0 394 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 VGLL2Q8N8G2 317 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 TRPM4Q8TD43 1214 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 HHIPL1Q96JK4 782 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 MEIS3Q99687 375 aa11.05□□□□□ -0.64
LINC00963-204ENST00000427778 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
LINC00963-204ENST00000427778 TAF5LO75529 589 aa11.04□□□□□ -0.64
LINC00963-204ENST00000427778 IL1R1P14778 569 aa11.04□□□□□ -0.64
LINC00963-204ENST00000427778 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
LINC00963-204ENST00000427778 ZNF804AQ7Z570 1209 aa11.04□□□□□ -0.64
LINC00963-204ENST00000427778 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
LINC00963-204ENST00000427778 PUS3Q9BZE2 481 aaKnown RBP11.04□□□□□ -0.64
LINC00963-204ENST00000427778 CD209Q9NNX6 404 aa11.04□□□□□ -0.64
LINC00963-204ENST00000427778 SNAP23O00161 211 aa11.03□□□□□ -0.64
LINC00963-204ENST00000427778 CIAO1O76071 339 aa11.03□□□□□ -0.64
LINC00963-204ENST00000427778 PDE8BO95263 885 aa11.03□□□□□ -0.64
LINC00963-204ENST00000427778 CELF2O95319 508 aaKnown RBP11.03□□□□□ -0.64
LINC00963-204ENST00000427778 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
LINC00963-204ENST00000427778 EMP3P54852 163 aa11.03□□□□□ -0.64
LINC00963-204ENST00000427778 FKBP1AP62942 108 aaKnown RBP11.03□□□□□ -0.64
LINC00963-204ENST00000427778 PTPN12Q05209 780 aaKnown RBP11.03□□□□□ -0.64
LINC00963-204ENST00000427778 FRAT1Q92837 279 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms