RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ISCA1Q9BUE6 129 aa12.09□□□□□ -0.47
LSG1-202ENST00000427461 XDHP47989 1333 aa12.09□□□□□ -0.47
LSG1-202ENST00000427461 AOX1Q06278 1338 aa12.09□□□□□ -0.47
LSG1-202ENST00000427461 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
LSG1-202ENST00000427461 CLRN2A0PK11 232 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 UNCXA6NJT0 531 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 GRK4P32298 578 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 BMP8BP34820 402 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
LSG1-202ENST00000427461 STRIP1Q5VSL9 837 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
LSG1-202ENST00000427461 NUDCQ9Y266 331 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
LSG1-202ENST00000427461 ECM29Q5VYK3 1845 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 TLR2O60603 784 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 SUPT20HL1Q3ZLR7 823 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 TTLL5Q6EMB2 1281 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 TXNRD3Q86VQ6 643 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 SRRDQ9UH36 339 aa12.07□□□□□ -0.48
LSG1-202ENST00000427461 ZMYND8Q9ULU4 1186 aaPredicted RBP12.07□□□□□ -0.48
LSG1-202ENST00000427461 MED23Q9ULK4 1368 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 OSBPP22059 807 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 PSMC4P43686 418 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 PRMT2P55345 433 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 RAET1EQ8TD07 263 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 TRIM47Q96LD4 638 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 GUCD1Q96NT3 240 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 UNC93B1Q9H1C4 597 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 BIN2Q9UBW5 565 aaPredicted RBP12.06□□□□□ -0.48
LSG1-202ENST00000427461 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 ZNF804BA4D1E1 1349 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 RPTORQ8N122 1335 aa12.06□□□□□ -0.48
LSG1-202ENST00000427461 SPEF2Q9C093 1822 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 SGPL1O95470 568 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 GNRH1P01148 92 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 SYN1P17600 705 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 GTF2A2P52657 109 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.05□□□□□ -0.48
LSG1-202ENST00000427461 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 C7orf61Q8IZ16 206 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
LSG1-202ENST00000427461 FAM161BQ96MY7 647 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 PPP2R3BQ9Y5P8 575 aa12.05□□□□□ -0.48
LSG1-202ENST00000427461 LAMA2P24043 3122 aaKnown RBP12.04□□□□□ -0.48
LSG1-202ENST00000427461 BTBD19C9JJ37 291 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 GTF2IP78347 998 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 RASA3Q14644 834 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 TDHQ8IZJ6 230 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
LSG1-202ENST00000427461 CPA4Q9UI42 421 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 MYPNQ86TC9 1320 aa12.04□□□□□ -0.48
LSG1-202ENST00000427461 MUC3AQ02505 3323 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
LSG1-202ENST00000427461 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
LSG1-202ENST00000427461 KLRK1P26718 216 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 MAGEA10P43363 369 aaPredicted RBP12.03□□□□□ -0.48
LSG1-202ENST00000427461 UBXN2AP68543 259 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 VGLL4Q14135 290 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 C17orf99Q6UX52 265 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
LSG1-202ENST00000427461 PAWRQ96IZ0 340 aaKnown RBP12.03□□□□□ -0.48
LSG1-202ENST00000427461 COA1Q9GZY4 146 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 IRS2Q9Y4H2 1338 aa12.03□□□□□ -0.48
LSG1-202ENST00000427461 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
LSG1-202ENST00000427461 MMP14P50281 582 aa12.02□□□□□ -0.49
LSG1-202ENST00000427461 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
LSG1-202ENST00000427461 CFAP100Q494V2 611 aa12.02□□□□□ -0.49
LSG1-202ENST00000427461 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
LSG1-202ENST00000427461 CERS5Q8N5B7 392 aa12.02□□□□□ -0.49
LSG1-202ENST00000427461 DEFB118Q96PH6 123 aa12.02□□□□□ -0.49
LSG1-202ENST00000427461 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
LSG1-202ENST00000427461 HOXD10P28358 340 aa12.01□□□□□ -0.49
LSG1-202ENST00000427461 PRKCZQ05513 592 aa12.01□□□□□ -0.49
LSG1-202ENST00000427461 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
LSG1-202ENST00000427461 MTMR14Q8NCE2 650 aa12.01□□□□□ -0.49
LSG1-202ENST00000427461 GABRQQ9UN88 632 aa12.01□□□□□ -0.49
LSG1-202ENST00000427461 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
LSG1-202ENST00000427461 POTEB2H3BUK9 544 aa12□□□□□ -0.49
LSG1-202ENST00000427461 MYO1BO43795 1136 aa12□□□□□ -0.49
LSG1-202ENST00000427461 WDHD1O75717 1129 aaPredicted RBP12□□□□□ -0.49
LSG1-202ENST00000427461 SPDYE6P0CI01 402 aa12□□□□□ -0.49
LSG1-202ENST00000427461 PLA2G5P39877 138 aa12□□□□□ -0.49
LSG1-202ENST00000427461 MAP3K9P80192 1104 aa12□□□□□ -0.49
LSG1-202ENST00000427461 NFE2L2Q16236 605 aa12□□□□□ -0.49
LSG1-202ENST00000427461 UBE2OQ9C0C9 1292 aaKnown RBP12□□□□□ -0.49
LSG1-202ENST00000427461 PDE8AO60658 829 aa11.99□□□□□ -0.49
LSG1-202ENST00000427461 CETPP11597 493 aa11.99□□□□□ -0.49
LSG1-202ENST00000427461 ELNP15502 786 aa11.99□□□□□ -0.49
LSG1-202ENST00000427461 TRIM28Q13263 835 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms