RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PRPF40BQ6NWY9 871 aaKnown RBP9.32□□□□□ -0.92
LINC01049-201ENST00000426840 LMBR1LQ6UX01 489 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 DDX46Q7L014 1031 aaKnown RBP9.32□□□□□ -0.92
LINC01049-201ENST00000426840 CELF1Q92879 486 aaKnown RBP9.32□□□□□ -0.92
LINC01049-201ENST00000426840 CCDC85AQ96PX6 553 aaPredicted RBP9.32□□□□□ -0.92
LINC01049-201ENST00000426840 MEIS3Q99687 375 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 HPS5Q9UPZ3 1129 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 TAF1P21675 1872 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 C21orf2O43822 256 aa9.31□□□□□ -0.92
LINC01049-201ENST00000426840 GRIN3BO60391 1043 aa9.31□□□□□ -0.92
LINC01049-201ENST00000426840 UBTFL1P0CB47 393 aaPredicted RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 RPS8P62241 208 aaKnown RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 GRAPQ13588 217 aa9.31□□□□□ -0.92
LINC01049-201ENST00000426840 RABL6Q3YEC7 729 aaPredicted RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 SWT1Q5T5J6 900 aaKnown RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 OLFM4Q6UX06 510 aa9.31□□□□□ -0.92
LINC01049-201ENST00000426840 SLC51AQ86UW1 340 aa9.31□□□□□ -0.92
LINC01049-201ENST00000426840 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 ANKRD44Q8N8A2 993 aa9.31□□□□□ -0.92
LINC01049-201ENST00000426840 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 GRAPLQ8TC17 118 aaPredicted RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 BICC1Q9H694 974 aaKnown RBP9.31□□□□□ -0.92
LINC01049-201ENST00000426840 GREM2Q9H772 168 aa9.31□□□□□ -0.92
LINC01049-201ENST00000426840 COL4A1P02462 1669 aa9.3□□□□□ -0.92
LINC01049-201ENST00000426840 RTL9Q8NET4 1388 aa9.3□□□□□ -0.92
LINC01049-201ENST00000426840 GNAI3P08754 354 aa9.3□□□□□ -0.92
LINC01049-201ENST00000426840 SP8Q8IXZ3 490 aa9.3□□□□□ -0.92
LINC01049-201ENST00000426840 NLRP7Q8WX94 980 aa9.3□□□□□ -0.92
LINC01049-201ENST00000426840 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
LINC01049-201ENST00000426840 COG6Q9Y2V7 657 aa9.3□□□□□ -0.92
LINC01049-201ENST00000426840 MYH3P11055 1940 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 ARFGEF1Q9Y6D6 1849 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 RCCD1A6NED2 376 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
LINC01049-201ENST00000426840 ITGA6P23229 1130 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 RRP1P56182 461 aaKnown RBP9.29□□□□□ -0.92
LINC01049-201ENST00000426840 MVPQ14764 893 aaKnown RBP9.29□□□□□ -0.92
LINC01049-201ENST00000426840 ARHGAP27Q6ZUM4 889 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 ITPRIPQ8IWB1 547 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 HDAC5Q9UQL6 1122 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 ATP6V0A2Q9Y487 856 aa9.29□□□□□ -0.92
LINC01049-201ENST00000426840 SUPT16HQ9Y5B9 1047 aaKnown RBP9.29□□□□□ -0.92
LINC01049-201ENST00000426840 LRRFIP2Q9Y608 721 aaKnown RBP9.29□□□□□ -0.92
LINC01049-201ENST00000426840 ANKRD18BA2A2Z9 1011 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 NFKBIEO00221 500 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 GNAI2P04899 355 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 DNAJB2P25686 324 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 RFX5P48382 616 aaPredicted RBP9.28□□□□□ -0.92
LINC01049-201ENST00000426840 PRELPP51888 382 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 IFIT5Q13325 482 aaKnown RBP9.28□□□□□ -0.92
LINC01049-201ENST00000426840 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 TMC4Q7Z404 712 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 METTL3Q86U44 580 aaKnown RBP9.28□□□□□ -0.92
LINC01049-201ENST00000426840 ANKRD18AQ8IVF6 992 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 PXYLP1Q8TE99 480 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 CDC5LQ99459 802 aaKnown RBP9.28□□□□□ -0.92
LINC01049-201ENST00000426840 BSDC1Q9NW68 430 aaPredicted RBP9.28□□□□□ -0.92
LINC01049-201ENST00000426840 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
LINC01049-201ENST00000426840 SNED1Q8TER0 1413 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 CACNA1SQ13698 1873 aa9.28□□□□□ -0.92
LINC01049-201ENST00000426840 OATP04181 439 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 PPP4CP60510 307 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 ATP8B2P98198 1209 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 MTX1Q13505 466 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 CCDC57Q2TAC2 916 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 CCDC93Q567U6 631 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 SOGA3Q5TF21 947 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 RTKN2Q8IZC4 609 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
LINC01049-201ENST00000426840 ZNF594Q96JF6 807 aaPredicted RBP9.27□□□□□ -0.93
LINC01049-201ENST00000426840 ZBTB40Q9NUA8 1239 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 DDX19BQ9UMR2 479 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 MINPP1Q9UNW1 487 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 CHMP3Q9Y3E7 222 aa9.27□□□□□ -0.93
LINC01049-201ENST00000426840 IGHMBP2P38935 993 aaKnown RBP9.26□□□□□ -0.93
LINC01049-201ENST00000426840 GPSM2P81274 684 aa9.26□□□□□ -0.93
LINC01049-201ENST00000426840 PTPN12Q05209 780 aaKnown RBP9.26□□□□□ -0.93
LINC01049-201ENST00000426840 GRIPAP1Q4V328 841 aa9.26□□□□□ -0.93
LINC01049-201ENST00000426840 MPNDQ8N594 471 aa9.26□□□□□ -0.93
LINC01049-201ENST00000426840 PUS3Q9BZE2 481 aaKnown RBP9.26□□□□□ -0.93
LINC01049-201ENST00000426840 LTBP3Q9NS15 1303 aa9.26□□□□□ -0.93
LINC01049-201ENST00000426840 FER1L6Q2WGJ9 1857 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 PNMA6EA0A0J9YXQ4 647 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 WTIPA6NIX2 430 aaPredicted RBP9.25□□□□□ -0.93
LINC01049-201ENST00000426840 FKBP4Q02790 459 aaKnown RBP eCLIP9.25□□□□□ -0.93
LINC01049-201ENST00000426840 RASSF7Q02833 373 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 MAP2K5Q13163 448 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 LDHAL6AQ6ZMR3 332 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 KRI1Q8N9T8 703 aaKnown RBP9.25□□□□□ -0.93
LINC01049-201ENST00000426840 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 PHOX2BQ99453 314 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 PSMD1Q99460 953 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 RTFDC1Q9BY42 306 aaPredicted RBP9.25□□□□□ -0.93
LINC01049-201ENST00000426840 TMEM134Q9H6X4 195 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 C1orf115Q9H7X2 142 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 PODXL2Q9NZ53 605 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
LINC01049-201ENST00000426840 RIPOR2Q9Y4F9 1068 aa9.25□□□□□ -0.93
LINC01049-201ENST00000426840 SBF1O95248 1867 aa9.24□□□□□ -0.93
LINC01049-201ENST00000426840 LRRC24Q50LG9 513 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms