RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 MYH3P11055 1940 aa8.83□□□□□ -1
CHCHD3P1-201ENST00000425516 SLX4Q8IY92 1834 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 SNED1Q8TER0 1413 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 ANKRD18BA2A2Z9 1011 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 YBX3P16989 372 aaKnown RBP eCLIP8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 IFIT5Q13325 482 aaKnown RBP8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 AAMPQ13685 434 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 CCDC57Q2TAC2 916 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 DALRD3Q5D0E6 543 aaKnown RBP8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 SP8Q8IXZ3 490 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 SSH3Q8TE77 659 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 BSDC1Q9NW68 430 aaPredicted RBP8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 PCDHB15Q9Y5E8 787 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 TAF1P21675 1872 aa8.82□□□□□ -1
CHCHD3P1-201ENST00000425516 IRX6P78412 446 aaPredicted RBP8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 OLFM4Q6UX06 510 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 THSD4Q6ZMP0 1018 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 TMC4Q7Z404 712 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 ANKRD18AQ8IVF6 992 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 RPAP2Q8IXW5 612 aaPredicted RBP8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 KLHDC4Q8TBB5 520 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 CDC5LQ99459 802 aaKnown RBP8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 PUS3Q9BZE2 481 aaKnown RBP8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 COPRSQ9NQ92 184 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 BCS1LQ9Y276 419 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 ATP6V0A2Q9Y487 856 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 RIPOR2Q9Y4F9 1068 aa8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 GOLGB1Q14789 3259 aaKnown RBP8.81□□□□□ -1
CHCHD3P1-201ENST00000425516 PPEF1O14829 653 aaPredicted RBP8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 SRGAP3O43295 1099 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 C21orf2O43822 256 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 BCAMP50895 628 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 PTPN5P54829 565 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 PRSS12P56730 875 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 LRRC24Q50LG9 513 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 PADI6Q6TGC4 694 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 ATG9AQ7Z3C6 839 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 WNT2BQ93097 391 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 NBPF3Q9H094 633 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 MINPP1Q9UNW1 487 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 PA2G4Q9UQ80 394 aaKnown RBP8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 NOP58Q9Y2X3 529 aaKnown RBP8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 CHMP3Q9Y3E7 222 aa8.8□□□□□ -1
CHCHD3P1-201ENST00000425516 TESPA1A2RU30 521 aaPredicted RBP8.79□□□□□ -1
CHCHD3P1-201ENST00000425516 WTIPA6NIX2 430 aaPredicted RBP8.79□□□□□ -1
CHCHD3P1-201ENST00000425516 IGHMBP2P38935 993 aaKnown RBP8.79□□□□□ -1
CHCHD3P1-201ENST00000425516 CC2D2BQ6DHV5 1058 aa8.79□□□□□ -1
CHCHD3P1-201ENST00000425516 LDHAL6AQ6ZMR3 332 aa8.79□□□□□ -1
CHCHD3P1-201ENST00000425516 PODXL2Q9NZ53 605 aa8.79□□□□□ -1
CHCHD3P1-201ENST00000425516 ARFGEF1Q9Y6D6 1849 aa8.79□□□□□ -1
CHCHD3P1-201ENST00000425516 LRRC37AA6NMS7 1700 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 EYA2O00167 538 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 NFKBIEO00221 500 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 CIAO1O76071 339 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 GPSM2P81274 684 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 SOGA3Q5TF21 947 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 VGLL2Q8N8G2 317 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 ZFRQ96KR1 1074 aaKnown RBP8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 MPHOSPH8Q99549 860 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 RTFDC1Q9BY42 306 aaPredicted RBP8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 LTBP3Q9NS15 1303 aa8.78□□□□□ -1
CHCHD3P1-201ENST00000425516 LTBP1Q14766 1721 aa8.77□□□□□ -1
CHCHD3P1-201ENST00000425516 SASH1O94885 1247 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 PRELPP51888 382 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 CHRNDQ07001 517 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 GPR162Q16538 588 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 CCDC93Q567U6 631 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TAF7LQ5H9L4 462 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 RTKN2Q8IZC4 609 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 PSMD1Q99460 953 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 CNNM1Q9NRU3 951 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 POLLQ9UGP5 575 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 DUOX1Q9NRD9 1551 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 IRS2Q9Y4H2 1338 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 CACNA1SQ13698 1873 aa8.77□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SNAP23O00161 211 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 GRIN3BO60391 1043 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SURF6O75683 361 aaKnown RBP8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 PDE8BO95263 885 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 FGFR2P21802 821 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 IL15P40933 162 aaPredicted RBP8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 HDAC1Q13547 482 aaPredicted RBP8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 MPNDQ8N594 471 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TTC13Q8NBP0 860 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 HELBQ8NG08 1087 aaPredicted RBP8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TBC1D16Q8TBP0 767 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ANKRD2Q9GZV1 360 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SIL1Q9H173 461 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 HCSTQ9UBK5 93 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 NSFL1CQ9UNZ2 370 aaKnown RBP8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 LEMD3Q9Y2U8 911 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 FER1L6Q2WGJ9 1857 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 XDHP47989 1333 aa8.76□□□□□ -1.01
CHCHD3P1-201ENST00000425516 MROH5Q6ZUA9 1318 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms