RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 AGBL3Q8NEM8 1001 aa26.94■■□□□ 1.9
HMGA2-205ENST00000425208 DBNDD2Q9BQY9 259 aa26.94■■□□□ 1.9
HMGA2-205ENST00000425208 FAM205AQ6ZU69 1335 aa26.94■■□□□ 1.9
HMGA2-205ENST00000425208 DPF2Q92785 391 aa26.93■■□□□ 1.9
HMGA2-205ENST00000425208 CCDC8Q9H0W5 538 aaPredicted RBP26.93■■□□□ 1.9
HMGA2-205ENST00000425208 GPRC5DQ9NZD1 345 aa26.93■■□□□ 1.9
HMGA2-205ENST00000425208 HACL1Q9UJ83 578 aa26.93■■□□□ 1.9
HMGA2-205ENST00000425208 DBNLQ9UJU6 430 aaKnown RBP26.93■■□□□ 1.9
HMGA2-205ENST00000425208 JAG2Q9Y219 1238 aa26.93■■□□□ 1.9
HMGA2-205ENST00000425208 SEMA3EO15041 775 aa26.92■■□□□ 1.9
HMGA2-205ENST00000425208 GCC1Q96CN9 775 aa26.92■■□□□ 1.9
HMGA2-205ENST00000425208 BCL11AQ9H165 835 aa26.92■■□□□ 1.9
HMGA2-205ENST00000425208 POTECB2RU33 542 aa26.91■■□□□ 1.9
HMGA2-205ENST00000425208 CHAF1AQ13111 956 aaPredicted RBP26.91■■□□□ 1.9
HMGA2-205ENST00000425208 CCDC158Q5M9N0 1113 aa26.91■■□□□ 1.9
HMGA2-205ENST00000425208 MXD3Q9BW11 206 aa26.91■■□□□ 1.9
HMGA2-205ENST00000425208 TLR7Q9NYK1 1049 aaKnown RBP26.91■■□□□ 1.9
HMGA2-205ENST00000425208 ZBTB22O15209 634 aa26.9■■□□□ 1.9
HMGA2-205ENST00000425208 FKBP1AP62942 108 aaKnown RBP26.9■■□□□ 1.9
HMGA2-205ENST00000425208 DENND2AQ9ULE3 1009 aa26.9■■□□□ 1.9
HMGA2-205ENST00000425208 COL1A1P02452 1464 aaPredicted RBP26.9■■□□□ 1.9
HMGA2-205ENST00000425208 IFIT2P09913 472 aaKnown RBP26.9■■□□□ 1.9
HMGA2-205ENST00000425208 MFSD14BQ5SR56 506 aa26.9■■□□□ 1.9
HMGA2-205ENST00000425208 TTC39AQ5SRH9 613 aa26.9■■□□□ 1.9
HMGA2-205ENST00000425208 TBC1D22AQ8WUA7 517 aa26.9■■□□□ 1.9
HMGA2-205ENST00000425208 GMLQ99445 158 aa26.9■■□□□ 1.9
HMGA2-205ENST00000425208 CNOT7Q9UIV1 285 aaKnown RBP26.9■■□□□ 1.9
HMGA2-205ENST00000425208 SMARCA5O60264 1052 aaPredicted RBP26.89■■□□□ 1.89
HMGA2-205ENST00000425208 UQCRFS1P1P0C7P4 283 aa26.89■■□□□ 1.89
HMGA2-205ENST00000425208 ARID4AP29374 1257 aaPredicted RBP26.89■■□□□ 1.89
HMGA2-205ENST00000425208 EPHX2P34913 555 aa26.89■■□□□ 1.89
HMGA2-205ENST00000425208 EPS15P42566 896 aa26.89■■□□□ 1.89
HMGA2-205ENST00000425208 MICALL2Q8IY33 904 aa26.89■■□□□ 1.89
HMGA2-205ENST00000425208 TAF1DQ9H5J8 278 aaPredicted RBP26.89■■□□□ 1.89
HMGA2-205ENST00000425208 H7C1D1 291 aa26.88■■□□□ 1.89
HMGA2-205ENST00000425208 RASGRF1Q13972 1273 aa26.88■■□□□ 1.89
HMGA2-205ENST00000425208 CERS5Q8N5B7 392 aa26.88■■□□□ 1.89
HMGA2-205ENST00000425208 WDR66Q8TBY9 1149 aa26.88■■□□□ 1.89
HMGA2-205ENST00000425208 ZBTB47Q9UFB7 747 aaPredicted RBP26.88■■□□□ 1.89
HMGA2-205ENST00000425208 KIF3CO14782 793 aa26.87■■□□□ 1.89
HMGA2-205ENST00000425208 IGHDP01880 384 aa26.87■■□□□ 1.89
HMGA2-205ENST00000425208 USP17L8P0C7I0 530 aa26.87■■□□□ 1.89
HMGA2-205ENST00000425208 PDS5AQ29RF7 1337 aaKnown RBP26.86■■□□□ 1.89
HMGA2-205ENST00000425208 KIAA0825Q8IV33 1275 aa26.86■■□□□ 1.89
HMGA2-205ENST00000425208 C16orf71Q8IYS4 520 aaPredicted RBP26.86■■□□□ 1.89
HMGA2-205ENST00000425208 OGFOD1Q8N543 542 aa26.86■■□□□ 1.89
HMGA2-205ENST00000425208 ADARB2Q9NS39 739 aaKnown RBP26.86■■□□□ 1.89
HMGA2-205ENST00000425208 PNMA8AQ86V59 439 aaPredicted RBP26.85■■□□□ 1.89
HMGA2-205ENST00000425208 ZNF512BQ96KM6 892 aaPredicted RBP26.85■■□□□ 1.89
HMGA2-205ENST00000425208 SHTN1A0MZ66 631 aa26.84■■□□□ 1.89
HMGA2-205ENST00000425208 MMP14P50281 582 aa26.84■■□□□ 1.89
HMGA2-205ENST00000425208 SMC5Q8IY18 1101 aa26.84■■□□□ 1.89
HMGA2-205ENST00000425208 HDAC9Q9UKV0 1011 aa26.84■■□□□ 1.89
HMGA2-205ENST00000425208 AKAP11Q9UKA4 1901 aa26.84■■□□□ 1.89
HMGA2-205ENST00000425208 MCAMP43121 646 aa26.83■■□□□ 1.89
HMGA2-205ENST00000425208 ANKRD45Q5TZF3 282 aa26.83■■□□□ 1.89
HMGA2-205ENST00000425208 SPATA5Q8NB90 893 aa26.83■■□□□ 1.89
HMGA2-205ENST00000425208 HMG20BQ9P0W2 317 aa26.83■■□□□ 1.89
HMGA2-205ENST00000425208 SALL1Q9NSC2 1324 aa26.83■■□□□ 1.89
HMGA2-205ENST00000425208 F8W031 263 aaPredicted RBP26.82■■□□□ 1.88
HMGA2-205ENST00000425208 ZNF280AP59817 542 aaPredicted RBP26.82■■□□□ 1.88
HMGA2-205ENST00000425208 EAPPQ56P03 285 aaPredicted RBP26.82■■□□□ 1.88
HMGA2-205ENST00000425208 USP50Q70EL3 339 aaPredicted RBP26.82■■□□□ 1.88
HMGA2-205ENST00000425208 SUGT1Q9Y2Z0 365 aa26.82■■□□□ 1.88
HMGA2-205ENST00000425208 SCARF1Q14162 830 aa26.82■■□□□ 1.88
HMGA2-205ENST00000425208 ZGPATQ8N5A5 531 aaKnown RBP26.82■■□□□ 1.88
HMGA2-205ENST00000425208 PI16Q6UXB8 463 aa26.81■■□□□ 1.88
HMGA2-205ENST00000425208 SAMD7Q7Z3H4 446 aa26.81■■□□□ 1.88
HMGA2-205ENST00000425208 MYOZ2Q9NPC6 264 aa26.81■■□□□ 1.88
HMGA2-205ENST00000425208 TTF2Q9UNY4 1162 aaKnown RBP26.81■■□□□ 1.88
HMGA2-205ENST00000425208 KIF4BQ2VIQ3 1234 aa26.8■■□□□ 1.88
HMGA2-205ENST00000425208 TBC1D10BQ4KMP7 808 aaPredicted RBP26.8■■□□□ 1.88
HMGA2-205ENST00000425208 TRPM4Q8TD43 1214 aa26.8■■□□□ 1.88
HMGA2-205ENST00000425208 GPATCH3Q96I76 525 aa26.79■■□□□ 1.88
HMGA2-205ENST00000425208 ADAMTSL1Q8N6G6 1762 aa26.79■■□□□ 1.88
HMGA2-205ENST00000425208 MAST3O60307 1309 aa26.78■■□□□ 1.88
HMGA2-205ENST00000425208 GRIK5Q16478 980 aa26.78■■□□□ 1.88
HMGA2-205ENST00000425208 RBM26Q5T8P6 1007 aaKnown RBP26.78■■□□□ 1.88
HMGA2-205ENST00000425208 B4GALNT3Q6L9W6 998 aa26.78■■□□□ 1.88
HMGA2-205ENST00000425208 SNRKQ9NRH2 765 aa26.78■■□□□ 1.88
HMGA2-205ENST00000425208 ABCF2Q9UG63 623 aa26.78■■□□□ 1.88
HMGA2-205ENST00000425208 TOMM70O94826 608 aa26.77■■□□□ 1.88
HMGA2-205ENST00000425208 EGFRP00533 1210 aa26.77■■□□□ 1.88
HMGA2-205ENST00000425208 LDHBP07195 334 aaKnown RBP26.77■■□□□ 1.88
HMGA2-205ENST00000425208 LDHDQ86WU2 507 aa26.77■■□□□ 1.88
HMGA2-205ENST00000425208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.77■■□□□ 1.88
HMGA2-205ENST00000425208 POTEIP0CG38 1075 aa26.76■■□□□ 1.87
HMGA2-205ENST00000425208 POTEJP0CG39 1038 aa26.76■■□□□ 1.87
HMGA2-205ENST00000425208 PRDX5P30044 214 aa26.76■■□□□ 1.87
HMGA2-205ENST00000425208 SPTY2D1Q68D10 685 aaPredicted RBP26.76■■□□□ 1.87
HMGA2-205ENST00000425208 CLEC11AQ9Y240 323 aa26.76■■□□□ 1.87
HMGA2-205ENST00000425208 ZAP70P43403 619 aa26.75■■□□□ 1.87
HMGA2-205ENST00000425208 ECHDC1Q9NTX5 307 aa26.75■■□□□ 1.87
HMGA2-205ENST00000425208 SERPINA10Q9UK55 444 aa26.75■■□□□ 1.87
HMGA2-205ENST00000425208 ATP5JP18859 108 aa26.74■■□□□ 1.87
HMGA2-205ENST00000425208 HIRAP54198 1017 aaPredicted RBP26.74■■□□□ 1.87
HMGA2-205ENST00000425208 NUCB1Q02818 461 aa26.74■■□□□ 1.87
HMGA2-205ENST00000425208 RBM46Q8TBY0 533 aaKnown RBP26.74■■□□□ 1.87
HMGA2-205ENST00000425208 LNPKQ9C0E8 428 aa26.74■■□□□ 1.87
HMGA2-205ENST00000425208 CYP2E1P05181 493 aaPredicted RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms