RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 GGA1Q9UJY5 639 aa18.01■□□□□ 0.47
CALD1-206ENST00000424922 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
CALD1-206ENST00000424922 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
CALD1-206ENST00000424922 ATP2B4P23634 1241 aa18■□□□□ 0.47
CALD1-206ENST00000424922 LRRFIP1Q32MZ4 808 aaKnown RBP18■□□□□ 0.47
CALD1-206ENST00000424922 ZNF589Q86UQ0 364 aaPredicted RBP18■□□□□ 0.47
CALD1-206ENST00000424922 IDH1O75874 414 aaKnown RBP17.99■□□□□ 0.47
CALD1-206ENST00000424922 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.99■□□□□ 0.47
CALD1-206ENST00000424922 MTFR1LQ9H019 292 aa17.99■□□□□ 0.47
CALD1-206ENST00000424922 MED23Q9ULK4 1368 aa17.99■□□□□ 0.47
CALD1-206ENST00000424922 COL1A1P02452 1464 aaPredicted RBP17.99■□□□□ 0.47
CALD1-206ENST00000424922 PTH1RQ03431 593 aa17.99■□□□□ 0.47
CALD1-206ENST00000424922 MCMDC2Q4G0Z9 681 aa17.99■□□□□ 0.47
CALD1-206ENST00000424922 ZMYM1Q5SVZ6 1142 aa17.99■□□□□ 0.47
CALD1-206ENST00000424922 POLLQ9UGP5 575 aa17.99■□□□□ 0.47
CALD1-206ENST00000424922 PSDA5PKW4 1024 aaPredicted RBP17.98■□□□□ 0.47
CALD1-206ENST00000424922 EPB41L2O43491 1005 aaKnown RBP17.98■□□□□ 0.47
CALD1-206ENST00000424922 ZFYP08048 801 aaPredicted RBP17.98■□□□□ 0.47
CALD1-206ENST00000424922 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
CALD1-206ENST00000424922 CCDC129Q6ZRS4 1044 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 TBC1D16Q8TBP0 767 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 HELLSQ9NRZ9 838 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 RAB3GAP1Q15042 981 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 SLC9C2Q5TAH2 1124 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 TMX4Q9H1E5 349 aaPredicted RBP17.98■□□□□ 0.47
CALD1-206ENST00000424922 DENND2AQ9ULE3 1009 aa17.98■□□□□ 0.47
CALD1-206ENST00000424922 CCDC171Q6TFL3 1326 aa17.97■□□□□ 0.47
CALD1-206ENST00000424922 MCCP23508 829 aa17.97■□□□□ 0.47
CALD1-206ENST00000424922 POLD1P28340 1107 aa17.97■□□□□ 0.47
CALD1-206ENST00000424922 WASHC4Q2M389 1173 aa17.97■□□□□ 0.47
CALD1-206ENST00000424922 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
CALD1-206ENST00000424922 CCDC88AQ3V6T2 1871 aa17.97■□□□□ 0.47
CALD1-206ENST00000424922 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
CALD1-206ENST00000424922 SEMA3EO15041 775 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 C15orf52Q6ZUT6 534 aaKnown RBP17.96■□□□□ 0.47
CALD1-206ENST00000424922 MPNDQ8N594 471 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 CHD4Q14839 1912 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 HSP90AA1P07900 732 aaKnown RBP17.96■□□□□ 0.47
CALD1-206ENST00000424922 ADD2P35612 726 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 ZNF804AQ7Z570 1209 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 OSBP2Q969R2 916 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
CALD1-206ENST00000424922 WWC3Q9ULE0 1092 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.47
CALD1-206ENST00000424922 MAP3K12Q12852 859 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 GLIPR1L2Q4G1C9 344 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 DPP8Q6V1X1 898 aaPredicted RBP17.95■□□□□ 0.46
CALD1-206ENST00000424922 IL27Q8NEV9 243 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 LRP2BPQ9P2M1 347 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 ABCF2Q9UG63 623 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 PALD1Q9ULE6 856 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 MAST3O60307 1309 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 M0R2C6 588 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 ST18O60284 1047 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 PDE6AP16499 860 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 PTMSP20962 102 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 HSPA4P34932 840 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 APPBP2Q92624 585 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 IL17RAQ96F46 866 aa17.95■□□□□ 0.46
CALD1-206ENST00000424922 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
CALD1-206ENST00000424922 CHAF1AQ13111 956 aaPredicted RBP17.94■□□□□ 0.46
CALD1-206ENST00000424922 MAP4K1Q92918 833 aa17.94■□□□□ 0.46
CALD1-206ENST00000424922 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
CALD1-206ENST00000424922 ZNF532Q9HCE3 1301 aa17.94■□□□□ 0.46
CALD1-206ENST00000424922 DPEP1P16444 411 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 JAG2Q9Y219 1238 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 KIAA1551Q9HCM1 1747 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 ANAPC15P60006 121 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 UBE3CQ15386 1083 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 CLEC17AQ6ZS10 378 aa17.93■□□□□ 0.46
CALD1-206ENST00000424922 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
CALD1-206ENST00000424922 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
CALD1-206ENST00000424922 RBM8AQ9Y5S9 174 aaKnown RBP17.93■□□□□ 0.46
CALD1-206ENST00000424922 PDS5AQ29RF7 1337 aaKnown RBP17.93■□□□□ 0.46
CALD1-206ENST00000424922 TCRBV5S4A2TA0A5A2 114 aa17.92■□□□□ 0.46
CALD1-206ENST00000424922 CD209Q9NNX6 404 aa17.92■□□□□ 0.46
CALD1-206ENST00000424922 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.92■□□□□ 0.46
CALD1-206ENST00000424922 KCNA3P22001 575 aa17.92■□□□□ 0.46
CALD1-206ENST00000424922 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
CALD1-206ENST00000424922 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
CALD1-206ENST00000424922 C7orf43Q8WVR3 580 aa17.92■□□□□ 0.46
CALD1-206ENST00000424922 RAI14Q9P0K7 980 aa17.92■□□□□ 0.46
CALD1-206ENST00000424922 NECTIN1Q15223 517 aa17.91■□□□□ 0.46
CALD1-206ENST00000424922 ZBTB22O15209 634 aa17.9■□□□□ 0.46
CALD1-206ENST00000424922 TRAK2O60296 914 aa17.9■□□□□ 0.46
CALD1-206ENST00000424922 ZC3H12CQ9C0D7 883 aaKnown RBP17.9■□□□□ 0.46
CALD1-206ENST00000424922 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
CALD1-206ENST00000424922 PPP1R1BQ9UD71 204 aaPredicted RBP17.9■□□□□ 0.46
CALD1-206ENST00000424922 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
CALD1-206ENST00000424922 GPAA1O43292 621 aa17.9■□□□□ 0.46
CALD1-206ENST00000424922 IL1R1P14778 569 aa17.9■□□□□ 0.46
CALD1-206ENST00000424922 RASEFQ8IZ41 740 aa17.9■□□□□ 0.46
CALD1-206ENST00000424922 SGIP1Q9BQI5 828 aa17.9■□□□□ 0.46
CALD1-206ENST00000424922 SNX14Q9Y5W7 946 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms