RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PMEPA1Q969W9 287 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 MRRFQ96E11 262 aaKnown RBP5.28□□□□□ -1.56
SF3B1-205ENST00000424674 CEP41Q9BYV8 373 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 SEC31BQ9NQW1 1179 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 DZANK1Q9NVP4 752 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 KCNK4Q9NYG8 393 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-205ENST00000424674 NFKBIEO00221 500 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 PDE2AO00408 941 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-205ENST00000424674 PHACTR2O75167 634 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 CLSTN1O94985 981 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 FSTP19883 344 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 PIP4K2BP78356 416 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 EHHADHQ08426 723 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 ZNF211Q13398 564 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-205ENST00000424674 DUOXA2Q1HG44 320 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 WNT8BQ93098 351 aa5.27□□□□□ -1.57
SF3B1-205ENST00000424674 ADAM11O75078 769 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 TRPA1O75762 1119 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 TCF3P15923 654 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 FKBP4Q02790 459 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B1-205ENST00000424674 UVSSAQ2YD98 709 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 B4GALNT3Q6L9W6 998 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 TICAM2Q86XR7 235 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 UBASH3BQ8TF42 649 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 UBXN4Q92575 508 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 KLHDC7BQ96G42 594 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 HHIPQ96QV1 700 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 UBL7Q96S82 380 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-205ENST00000424674 RNF112Q9ULX5 631 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 RAXQ9Y2V3 346 aa5.26□□□□□ -1.57
SF3B1-205ENST00000424674 EREGO14944 169 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 FZD6O60353 706 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 EDN3P14138 238 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 SERPINB4P48594 390 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 KIAA1211Q6ZU35 1233 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 NBPF11Q86T75 865 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 SLC51AQ86UW1 340 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 TMEM102Q8N9M5 508 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-205ENST00000424674 ZKSCAN3Q9BRR0 538 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 OSGEPQ9NPF4 335 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 FOXD3Q9UJU5 478 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-205ENST00000424674 SOX13Q9UN79 622 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 GNEQ9Y223 722 aaKnown RBP5.25□□□□□ -1.57
SF3B1-205ENST00000424674 CADPSQ9ULU8 1353 aa5.25□□□□□ -1.57
SF3B1-205ENST00000424674 GSC2O15499 205 aa5.24□□□□□ -1.57
SF3B1-205ENST00000424674 DDX3YO15523 660 aaKnown RBP5.24□□□□□ -1.57
SF3B1-205ENST00000424674 DHX15O43143 795 aaKnown RBP5.24□□□□□ -1.57
SF3B1-205ENST00000424674 HYAL3O43820 417 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-205ENST00000424674 ARL4DP49703 201 aa5.24□□□□□ -1.57
SF3B1-205ENST00000424674 NLRP12P59046 1061 aa5.24□□□□□ -1.57
SF3B1-205ENST00000424674 SF3A1Q15459 793 aaKnown RBP5.24□□□□□ -1.57
SF3B1-205ENST00000424674 GJD3Q8N144 294 aa5.24□□□□□ -1.57
SF3B1-205ENST00000424674 ARMC10Q8N2F6 343 aa5.24□□□□□ -1.57
SF3B1-205ENST00000424674 SLC7A3Q8WY07 619 aa5.24□□□□□ -1.57
SF3B1-205ENST00000424674 UTP4Q969X6 686 aaKnown RBP5.24□□□□□ -1.57
SF3B1-205ENST00000424674 OSMRQ99650 979 aa5.24□□□□□ -1.57
SF3B1-205ENST00000424674 KIAA1522Q9P206 1035 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-205ENST00000424674 ANKRD62A6NC57 917 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 BSNDQ8WZ55 320 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 NXPE3Q969Y0 559 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 FAM46AQ96IP4 442 aaKnown RBP5.23□□□□□ -1.57
SF3B1-205ENST00000424674 RUSC1Q9BVN2 902 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 RNF208Q9H0X6 261 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 CCDC87Q9NVE4 849 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 EGFL7Q9UHF1 273 aa5.23□□□□□ -1.57
SF3B1-205ENST00000424674 H3BRB1 525 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 IGLV1-40P01703 118 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 ZC3H6P61129 1189 aaKnown RBP5.22□□□□□ -1.57
SF3B1-205ENST00000424674 C19orf57Q0VDD7 668 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 IKBKEQ14164 716 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 ANKRD34AQ69YU3 496 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-205ENST00000424674 NOL8Q76FK4 1167 aaKnown RBP5.22□□□□□ -1.57
SF3B1-205ENST00000424674 TXNDC2Q86VQ3 553 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 ASAP3Q8TDY4 903 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 MYRFLQ96LU7 910 aa5.22□□□□□ -1.57
SF3B1-205ENST00000424674 HIRIP3Q9BW71 556 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-205ENST00000424674 BHLHE41Q9C0J9 482 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-205ENST00000424674 TUT1Q9H6E5 874 aaKnown RBP5.22□□□□□ -1.57
SF3B1-205ENST00000424674 SART1O43290 800 aaKnown RBP5.21□□□□□ -1.58
SF3B1-205ENST00000424674 ICMTO60725 284 aa5.21□□□□□ -1.58
SF3B1-205ENST00000424674 PREPP48147 710 aa5.21□□□□□ -1.58
SF3B1-205ENST00000424674 PEAR1Q5VY43 1037 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-205ENST00000424674 HGSNATQ68CP4 663 aa5.21□□□□□ -1.58
SF3B1-205ENST00000424674 FDX2Q6P4F2 183 aa5.21□□□□□ -1.58
SF3B1-205ENST00000424674 VN1R5Q7Z5H4 357 aa5.21□□□□□ -1.58
SF3B1-205ENST00000424674 GLYCTKQ8IVS8 523 aa5.21□□□□□ -1.58
SF3B1-205ENST00000424674 LATS2Q9NRM7 1088 aa5.21□□□□□ -1.58
SF3B1-205ENST00000424674 PLEKHD1A6NEE1 506 aa5.2□□□□□ -1.58
SF3B1-205ENST00000424674 NFIAQ12857 509 aa5.2□□□□□ -1.58
SF3B1-205ENST00000424674 FAM20CQ8IXL6 584 aa5.2□□□□□ -1.58
SF3B1-205ENST00000424674 CCER1Q8TC90 406 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-205ENST00000424674 USP26Q9BXU7 913 aa5.2□□□□□ -1.58
SF3B1-205ENST00000424674 SOX17Q9H6I2 414 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-205ENST00000424674 C7orf69Q9H7B7 122 aa5.2□□□□□ -1.58
SF3B1-205ENST00000424674 ZFYVE28Q9HCC9 887 aa5.2□□□□□ -1.58
SF3B1-205ENST00000424674 PCMTD2Q9NV79 361 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms