RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 MYH13Q9UKX3 1938 aa23.18■■□□□ 1.3
PRNP-202ENST00000424424 ATP2B3Q16720 1220 aa23.18■■□□□ 1.3
PRNP-202ENST00000424424 FAM205AQ6ZU69 1335 aa23.17■■□□□ 1.3
PRNP-202ENST00000424424 PNMA6EA0A0J9YXQ4 647 aa23.17■■□□□ 1.3
PRNP-202ENST00000424424 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
PRNP-202ENST00000424424 GLIS2Q9BZE0 524 aaPredicted RBP23.17■■□□□ 1.3
PRNP-202ENST00000424424 CHMP4BQ9H444 224 aaKnown RBP23.17■■□□□ 1.3
PRNP-202ENST00000424424 DDX19BQ9UMR2 479 aa23.17■■□□□ 1.3
PRNP-202ENST00000424424 BCAMP50895 628 aa23.16■■□□□ 1.3
PRNP-202ENST00000424424 G3BP1Q13283 466 aaKnown RBP eCLIP23.16■■□□□ 1.3
PRNP-202ENST00000424424 SCARF1Q14162 830 aa23.16■■□□□ 1.3
PRNP-202ENST00000424424 MVPQ14764 893 aaKnown RBP23.16■■□□□ 1.3
PRNP-202ENST00000424424 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
PRNP-202ENST00000424424 JAG2Q9Y219 1238 aa23.16■■□□□ 1.3
PRNP-202ENST00000424424 AKAP2Q9Y2D5 859 aa23.16■■□□□ 1.3
PRNP-202ENST00000424424 TRAF5O00463 557 aa23.15■■□□□ 1.3
PRNP-202ENST00000424424 KRT26Q7Z3Y9 468 aa23.15■■□□□ 1.3
PRNP-202ENST00000424424 CERS5Q8N5B7 392 aa23.15■■□□□ 1.3
PRNP-202ENST00000424424 GGA3Q9NZ52 723 aa23.15■■□□□ 1.3
PRNP-202ENST00000424424 IQSEC3Q9UPP2 1182 aaPredicted RBP23.15■■□□□ 1.3
PRNP-202ENST00000424424 MFSD14BQ5SR56 506 aa23.14■■□□□ 1.29
PRNP-202ENST00000424424 USP48Q86UV5 1035 aa23.14■■□□□ 1.29
PRNP-202ENST00000424424 SULF1Q8IWU6 871 aa23.14■■□□□ 1.29
PRNP-202ENST00000424424 SSH3Q8TE77 659 aa23.14■■□□□ 1.29
PRNP-202ENST00000424424 KLRG1Q96E93 195 aa23.14■■□□□ 1.29
PRNP-202ENST00000424424 COG6Q9Y2V7 657 aa23.14■■□□□ 1.29
PRNP-202ENST00000424424 ARAP2Q8WZ64 1704 aa23.13■■□□□ 1.29
PRNP-202ENST00000424424 F8W031 263 aaPredicted RBP23.13■■□□□ 1.29
PRNP-202ENST00000424424 CHAF1AQ13111 956 aaPredicted RBP23.13■■□□□ 1.29
PRNP-202ENST00000424424 POLA2Q14181 598 aa23.13■■□□□ 1.29
PRNP-202ENST00000424424 PDE3AQ14432 1141 aa23.13■■□□□ 1.29
PRNP-202ENST00000424424 ANGEL2Q5VTE6 544 aaKnown RBP23.13■■□□□ 1.29
PRNP-202ENST00000424424 TBC1D22AQ8WUA7 517 aa23.13■■□□□ 1.29
PRNP-202ENST00000424424 GNL3LQ9NVN8 582 aaKnown RBP23.13■■□□□ 1.29
PRNP-202ENST00000424424 PITPNM2Q9BZ72 1349 aa23.12■■□□□ 1.29
PRNP-202ENST00000424424 FMR1Q06787 632 aaKnown RBP eCLIP23.12■■□□□ 1.29
PRNP-202ENST00000424424 TFCP2Q12800 502 aa23.12■■□□□ 1.29
PRNP-202ENST00000424424 JMYQ8N9B5 988 aa23.12■■□□□ 1.29
PRNP-202ENST00000424424 WNT10BO00744 389 aa23.11■■□□□ 1.29
PRNP-202ENST00000424424 CELF2O95319 508 aaKnown RBP23.11■■□□□ 1.29
PRNP-202ENST00000424424 OS9Q13438 667 aaPredicted RBP23.11■■□□□ 1.29
PRNP-202ENST00000424424 DLGAP5Q15398 846 aa23.11■■□□□ 1.29
PRNP-202ENST00000424424 NBPF9Q3BBW0 867 aa23.11■■□□□ 1.29
PRNP-202ENST00000424424 ZNF408Q9H9D4 720 aa23.11■■□□□ 1.29
PRNP-202ENST00000424424 ABT1Q9ULW3 272 aaKnown RBP23.11■■□□□ 1.29
PRNP-202ENST00000424424 ECM29Q5VYK3 1845 aa23.1■■□□□ 1.29
PRNP-202ENST00000424424 ASTN2O75129 1339 aaPredicted RBP23.09■■□□□ 1.29
PRNP-202ENST00000424424 A0A1B0GUL7 405 aa23.09■■□□□ 1.29
PRNP-202ENST00000424424 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
PRNP-202ENST00000424424 TIMM10P62072 90 aa23.09■■□□□ 1.29
PRNP-202ENST00000424424 CST9Q5W186 159 aa23.09■■□□□ 1.29
PRNP-202ENST00000424424 CEP85Q6P2H3 762 aa23.09■■□□□ 1.29
PRNP-202ENST00000424424 MTMR14Q8NCE2 650 aa23.09■■□□□ 1.29
PRNP-202ENST00000424424 TTF2Q9UNY4 1162 aaKnown RBP23.09■■□□□ 1.29
PRNP-202ENST00000424424 ADM5C9JUS6 153 aa23.08■■□□□ 1.29
PRNP-202ENST00000424424 MYO1BO43795 1136 aa23.08■■□□□ 1.29
PRNP-202ENST00000424424 RBM5P52756 815 aaKnown RBP eCLIP23.08■■□□□ 1.29
PRNP-202ENST00000424424 CFAP100Q494V2 611 aa23.08■■□□□ 1.29
PRNP-202ENST00000424424 WDR66Q8TBY9 1149 aa23.08■■□□□ 1.29
PRNP-202ENST00000424424 NEUROD6Q96NK8 337 aa23.08■■□□□ 1.29
PRNP-202ENST00000424424 MKRN1Q9UHC7 482 aaKnown RBP23.08■■□□□ 1.29
PRNP-202ENST00000424424 SEMA3EO15041 775 aa23.07■■□□□ 1.28
PRNP-202ENST00000424424 DEFB115Q30KQ5 88 aa23.07■■□□□ 1.28
PRNP-202ENST00000424424 CNTNAP1P78357 1384 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 GORABQ5T7V8 394 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 CCDC102BQ68D86 513 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 APOBEC3FQ8IUX4 373 aaKnown RBP23.06■■□□□ 1.28
PRNP-202ENST00000424424 RPAP2Q8IXW5 612 aaPredicted RBP23.06■■□□□ 1.28
PRNP-202ENST00000424424 XAGE2Q96GT9 111 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 ZBED3Q96IU2 234 aaPredicted RBP23.06■■□□□ 1.28
PRNP-202ENST00000424424 ZBTB40Q9NUA8 1239 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 SERPINA10Q9UK55 444 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 DENND2AQ9ULE3 1009 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
PRNP-202ENST00000424424 SUGT1Q9Y2Z0 365 aa23.06■■□□□ 1.28
PRNP-202ENST00000424424 PCNTO95613 3336 aa23.05■■□□□ 1.28
PRNP-202ENST00000424424 RASSF10A6NK89 507 aa23.05■■□□□ 1.28
PRNP-202ENST00000424424 ADORA1P30542 326 aa23.05■■□□□ 1.28
PRNP-202ENST00000424424 PHKA1P46020 1223 aa23.05■■□□□ 1.28
PRNP-202ENST00000424424 C20orf194Q5TEA3 1177 aa23.05■■□□□ 1.28
PRNP-202ENST00000424424 TLL2Q9Y6L7 1015 aa23.05■■□□□ 1.28
PRNP-202ENST00000424424 MAST3O60307 1309 aa23.05■■□□□ 1.28
PRNP-202ENST00000424424 SPDYE2BA6NHP3 402 aa23.04■■□□□ 1.28
PRNP-202ENST00000424424 HMMRO75330 724 aa23.04■■□□□ 1.28
PRNP-202ENST00000424424 SPDYE6P0CI01 402 aa23.04■■□□□ 1.28
PRNP-202ENST00000424424 GPR108Q9NPR9 543 aa23.04■■□□□ 1.28
PRNP-202ENST00000424424 ZBTB22O15209 634 aa23.03■■□□□ 1.28
PRNP-202ENST00000424424 HDLBPQ00341 1268 aaKnown RBP23.03■■□□□ 1.28
PRNP-202ENST00000424424 DLK2Q6UY11 383 aa23.03■■□□□ 1.28
PRNP-202ENST00000424424 C2orf69Q8N8R5 385 aa23.03■■□□□ 1.28
PRNP-202ENST00000424424 CDCA5Q96FF9 252 aa23.03■■□□□ 1.28
PRNP-202ENST00000424424 CRKP46108 304 aa23.02■■□□□ 1.28
PRNP-202ENST00000424424 HSP90AB4PQ58FF6 505 aa23.02■■□□□ 1.28
PRNP-202ENST00000424424 PAXIP1Q6ZW49 1069 aaPredicted RBP23.02■■□□□ 1.28
PRNP-202ENST00000424424 ERC1Q8IUD2 1116 aa23.02■■□□□ 1.28
PRNP-202ENST00000424424 PRMT6Q96LA8 375 aaPredicted RBP23.02■■□□□ 1.28
PRNP-202ENST00000424424 GBA2Q9HCG7 927 aaPredicted RBP23.02■■□□□ 1.28
PRNP-202ENST00000424424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.02■■□□□ 1.28
PRNP-202ENST00000424424 ECE1P42892 770 aa23.01■■□□□ 1.27
PRNP-202ENST00000424424 SAPCD2Q86UD0 394 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms