RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 UBASH3BQ8TF42 649 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 KLHDC7BQ96G42 594 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 RUSC1Q9BVN2 902 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 CHRDQ9H2X0 955 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 COL17A1Q9UMD9 1497 aaPredicted RBP4.54□□□□□ -1.68
PMS1-209ENST00000424059 SPINK2P20155 84 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 MPSTP25325 297 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 SSFA2P28290 1259 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 SSTR4P31391 388 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 FDX2Q6P4F2 183 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 ATCAYQ86WG3 371 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 GIMAP7Q8NHV1 300 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 BSNDQ8WZ55 320 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 BHLHE41Q9C0J9 482 aaPredicted RBP4.54□□□□□ -1.68
PMS1-209ENST00000424059 GGNBP2Q9H3C7 697 aa4.54□□□□□ -1.68
PMS1-209ENST00000424059 PAX4O43316 350 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 PHACTR2O75167 634 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 GTF3C2Q8WUA4 911 aaPredicted RBP4.53□□□□□ -1.68
PMS1-209ENST00000424059 NXPE3Q969Y0 559 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 TMEM88BA6NKF7 163 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 GAS2O43903 313 aaKnown RBP4.53□□□□□ -1.68
PMS1-209ENST00000424059 C8orf34Q49A92 452 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 HP1BP3Q5SSJ5 553 aaPredicted RBP4.53□□□□□ -1.68
PMS1-209ENST00000424059 B4GALNT3Q6L9W6 998 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 ADAMTSL4Q6UY14 1074 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 TRIM42Q8IWZ5 723 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 SMG8Q8ND04 991 aaKnown RBP4.53□□□□□ -1.68
PMS1-209ENST00000424059 SUGCTQ9HAC7 445 aa4.53□□□□□ -1.68
PMS1-209ENST00000424059 DDX3YO15523 660 aaKnown RBP4.52□□□□□ -1.69
PMS1-209ENST00000424059 TGFB1P01137 390 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 CDC25BP30305 580 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 IRAK1P51617 712 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 IKBKEQ14164 716 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 DTX1Q86Y01 620 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 OSMRQ99650 979 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 POLIQ9UNA4 740 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 AMOTL2Q9Y2J4 779 aa4.52□□□□□ -1.69
PMS1-209ENST00000424059 PRR19A6NJB7 356 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 TNFRSF21O75509 655 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 BMP3P12645 472 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 PREPP48147 710 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 BEND4Q6ZU67 534 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 CYP4F12Q9HCS2 524 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 NEFLP07196 543 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 TXKP42681 527 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 VN1R5Q7Z5H4 357 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 GJD3Q8N144 294 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 ZKSCAN3Q9BRR0 538 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 TMPRSS13Q9BYE2 586 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 ZFYVE1Q9HBF4 777 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 EGFL7Q9UHF1 273 aa4.51□□□□□ -1.69
PMS1-209ENST00000424059 HMX2A2RU54 273 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 EREGO14944 169 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 TIAF1O95411 115 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 ACPPP15309 386 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 GP2P55259 537 aaKnown RBP4.5□□□□□ -1.69
PMS1-209ENST00000424059 NLRP12P59046 1061 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 SHKBP1Q8TBC3 707 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 SLC7A3Q8WY07 619 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 YIPF2Q9BWQ6 316 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 KCNF1Q9H3M0 494 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 MAP4P27816 1152 aaKnown RBP4.5□□□□□ -1.69
PMS1-209ENST00000424059 FKBP4Q02790 459 aaKnown RBP eCLIP4.5□□□□□ -1.69
PMS1-209ENST00000424059 NUTM2GQ5VZR2 741 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 FMNL2Q96PY5 1086 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 ATG3Q9NT62 314 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 USTQ9Y2C2 406 aa4.5□□□□□ -1.69
PMS1-209ENST00000424059 SOX1O00570 391 aaPredicted RBP4.49□□□□□ -1.69
PMS1-209ENST00000424059 FZD6O60353 706 aa4.49□□□□□ -1.69
PMS1-209ENST00000424059 MED26O95402 600 aa4.49□□□□□ -1.69
PMS1-209ENST00000424059 ESRRAP11474 423 aaPredicted RBP4.49□□□□□ -1.69
PMS1-209ENST00000424059 AAMPQ13685 434 aa4.49□□□□□ -1.69
PMS1-209ENST00000424059 PAOXQ6QHF9 649 aa4.49□□□□□ -1.69
PMS1-209ENST00000424059 HHIPQ96QV1 700 aa4.49□□□□□ -1.69
PMS1-209ENST00000424059 METTL22Q9BUU2 404 aaPredicted RBP4.49□□□□□ -1.69
PMS1-209ENST00000424059 ZFYVE28Q9HCC9 887 aa4.49□□□□□ -1.69
PMS1-209ENST00000424059 PIM2Q9P1W9 311 aa4.49□□□□□ -1.69
PMS1-209ENST00000424059 LOC100289279A0A1B0GTE1 492 aa4.48□□□□□ -1.69
PMS1-209ENST00000424059 A6NHS1 94 aa4.48□□□□□ -1.69
PMS1-209ENST00000424059 WNT11O96014 354 aa4.48□□□□□ -1.69
PMS1-209ENST00000424059 EXOSC6Q5RKV6 272 aaKnown RBP4.48□□□□□ -1.69
PMS1-209ENST00000424059 CCDC82Q8N4S0 544 aa4.48□□□□□ -1.69
PMS1-209ENST00000424059 DDX54Q8TDD1 881 aaKnown RBP4.48□□□□□ -1.69
PMS1-209ENST00000424059 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.48□□□□□ -1.69
PMS1-209ENST00000424059 GALNT12Q8IXK2 581 aa4.48□□□□□ -1.69
PMS1-209ENST00000424059 USP26Q9BXU7 913 aa4.48□□□□□ -1.69
PMS1-209ENST00000424059 FOXD3Q9UJU5 478 aaPredicted RBP4.48□□□□□ -1.69
PMS1-209ENST00000424059 OAS3Q9Y6K5 1087 aaKnown RBP4.48□□□□□ -1.69
PMS1-209ENST00000424059 WDR64B1ANS9 1081 aa4.47□□□□□ -1.69
PMS1-209ENST00000424059 EZH1Q92800 747 aaPredicted RBP4.47□□□□□ -1.69
PMS1-209ENST00000424059 LEMD3Q9Y2U8 911 aa4.47□□□□□ -1.69
PMS1-209ENST00000424059 TRPA1O75762 1119 aa4.46□□□□□ -1.69
PMS1-209ENST00000424059 PRNPP04156 253 aa4.46□□□□□ -1.69
PMS1-209ENST00000424059 RXRBP28702 533 aa4.46□□□□□ -1.69
PMS1-209ENST00000424059 SGO2Q562F6 1265 aa4.46□□□□□ -1.69
PMS1-209ENST00000424059 PEAR1Q5VY43 1037 aaPredicted RBP4.46□□□□□ -1.69
PMS1-209ENST00000424059 NPM2Q86SE8 214 aaKnown RBP4.46□□□□□ -1.69
PMS1-209ENST00000424059 CCNJLQ8IV13 435 aa4.46□□□□□ -1.69
PMS1-209ENST00000424059 C12orf50Q8NA57 414 aaPredicted RBP4.46□□□□□ -1.69
PMS1-209ENST00000424059 ASAP3Q8TDY4 903 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms