RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 DACT2Q5SW24 774 aa14.82□□□□□ -0.04
LINC00539-202ENST00000423575 TSHZ3Q63HK5 1081 aa14.82□□□□□ -0.04
LINC00539-202ENST00000423575 CIAPIN1Q6FI81 312 aa14.82□□□□□ -0.04
LINC00539-202ENST00000423575 USP17L1Q7RTZ2 530 aa14.82□□□□□ -0.04
LINC00539-202ENST00000423575 ZNF512BQ96KM6 892 aaPredicted RBP14.82□□□□□ -0.04
LINC00539-202ENST00000423575 FAM205AQ6ZU69 1335 aa14.82□□□□□ -0.04
LINC00539-202ENST00000423575 SEMA3EO15041 775 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 PDE4AP27815 886 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 STRIP1Q5VSL9 837 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 TTLL5Q6EMB2 1281 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 FBXW7Q969H0 707 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 MXD3Q9BW11 206 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 ECHDC1Q9NTX5 307 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 HMG20BQ9P0W2 317 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 GJA3Q9Y6H8 435 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 CHD4Q14839 1912 aa14.81□□□□□ -0.04
LINC00539-202ENST00000423575 DDNO94850 711 aaPredicted RBP14.8□□□□□ -0.04
LINC00539-202ENST00000423575 VIL1P09327 827 aaKnown RBP14.8□□□□□ -0.04
LINC00539-202ENST00000423575 MX1P20591 662 aa14.8□□□□□ -0.04
LINC00539-202ENST00000423575 TNIP1Q15025 636 aa14.8□□□□□ -0.04
LINC00539-202ENST00000423575 CERS5Q8N5B7 392 aa14.8□□□□□ -0.04
LINC00539-202ENST00000423575 SPATA5Q8NB90 893 aa14.8□□□□□ -0.04
LINC00539-202ENST00000423575 SNRKQ9NRH2 765 aa14.8□□□□□ -0.04
LINC00539-202ENST00000423575 DENND2AQ9ULE3 1009 aa14.8□□□□□ -0.04
LINC00539-202ENST00000423575 PDS5AQ29RF7 1337 aaKnown RBP14.8□□□□□ -0.04
LINC00539-202ENST00000423575 ZNF646O15015 1829 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-202ENST00000423575 ATP5JP18859 108 aa14.79□□□□□ -0.04
LINC00539-202ENST00000423575 GMPSP49915 693 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-202ENST00000423575 RSBN1LQ6PCB5 846 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-202ENST00000423575 SKAP1Q86WV1 359 aa14.79□□□□□ -0.04
LINC00539-202ENST00000423575 GPC2Q8N158 579 aa14.79□□□□□ -0.04
LINC00539-202ENST00000423575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.79□□□□□ -0.04
LINC00539-202ENST00000423575 GPATCH3Q96I76 525 aa14.79□□□□□ -0.04
LINC00539-202ENST00000423575 STAP2Q9UGK3 403 aa14.79□□□□□ -0.04
LINC00539-202ENST00000423575 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-202ENST00000423575 NDUFB9Q9Y6M9 179 aa14.79□□□□□ -0.04
LINC00539-202ENST00000423575 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 GLTPD2A6NH11 291 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 ZAP70P43403 619 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 PDE1AP54750 535 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 GRIK5Q16478 980 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 MFSD14BQ5SR56 506 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 PLEKHM2Q8IWE5 1019 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 PI4K2BQ8TCG2 481 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 GMLQ99445 158 aa14.78□□□□□ -0.04
LINC00539-202ENST00000423575 FKBP1AP62942 108 aaKnown RBP14.77□□□□□ -0.05
LINC00539-202ENST00000423575 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
LINC00539-202ENST00000423575 WDR66Q8TBY9 1149 aa14.77□□□□□ -0.05
LINC00539-202ENST00000423575 TBC1D22AQ8WUA7 517 aa14.77□□□□□ -0.05
LINC00539-202ENST00000423575 HAUS7Q99871 368 aa14.77□□□□□ -0.05
LINC00539-202ENST00000423575 BOLA2Q9H3K6 86 aa14.77□□□□□ -0.05
LINC00539-202ENST00000423575 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.05
LINC00539-202ENST00000423575 PSME4Q14997 1843 aa14.77□□□□□ -0.05
LINC00539-202ENST00000423575 AOX1Q06278 1338 aa14.76□□□□□ -0.05
LINC00539-202ENST00000423575 MYO3BQ8WXR4 1341 aa14.76□□□□□ -0.05
LINC00539-202ENST00000423575 SALL1Q9NSC2 1324 aa14.76□□□□□ -0.05
LINC00539-202ENST00000423575 CYP2E1P05181 493 aaPredicted RBP14.76□□□□□ -0.05
LINC00539-202ENST00000423575 RPS12P25398 132 aaKnown RBP14.76□□□□□ -0.05
LINC00539-202ENST00000423575 SCNN1DP51172 638 aa14.76□□□□□ -0.05
LINC00539-202ENST00000423575 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
LINC00539-202ENST00000423575 AGBL3Q8NEM8 1001 aa14.76□□□□□ -0.05
LINC00539-202ENST00000423575 EDC3Q96F86 508 aaKnown RBP14.76□□□□□ -0.05
LINC00539-202ENST00000423575 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
LINC00539-202ENST00000423575 DNAJC2Q99543 621 aaKnown RBP14.76□□□□□ -0.05
LINC00539-202ENST00000423575 PIH1D3Q9NQM4 214 aaKnown RBP14.76□□□□□ -0.05
LINC00539-202ENST00000423575 AKAP11Q9UKA4 1901 aa14.75□□□□□ -0.05
LINC00539-202ENST00000423575 SHTN1A0MZ66 631 aa14.75□□□□□ -0.05
LINC00539-202ENST00000423575 ERC2O15083 957 aa14.75□□□□□ -0.05
LINC00539-202ENST00000423575 GLRX3O76003 335 aaKnown RBP14.75□□□□□ -0.05
LINC00539-202ENST00000423575 PRDX5P30044 214 aa14.75□□□□□ -0.05
LINC00539-202ENST00000423575 KIAA0825Q8IV33 1275 aa14.75□□□□□ -0.05
LINC00539-202ENST00000423575 OSBPL3Q9H4L5 887 aa14.75□□□□□ -0.05
LINC00539-202ENST00000423575 ANTXR1Q9H6X2 564 aa14.75□□□□□ -0.05
LINC00539-202ENST00000423575 F8W031 263 aaPredicted RBP14.74□□□□□ -0.05
LINC00539-202ENST00000423575 GOLIM4O00461 696 aa14.74□□□□□ -0.05
LINC00539-202ENST00000423575 ZNF526Q8TF50 670 aaPredicted RBP14.74□□□□□ -0.05
LINC00539-202ENST00000423575 DPF2Q92785 391 aa14.74□□□□□ -0.05
LINC00539-202ENST00000423575 PAG1Q9NWQ8 432 aa14.74□□□□□ -0.05
LINC00539-202ENST00000423575 GPRC5DQ9NZD1 345 aa14.74□□□□□ -0.05
LINC00539-202ENST00000423575 ABCF2Q9UG63 623 aa14.74□□□□□ -0.05
LINC00539-202ENST00000423575 MYH13Q9UKX3 1938 aa14.73□□□□□ -0.05
LINC00539-202ENST00000423575 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
LINC00539-202ENST00000423575 ZGPATQ8N5A5 531 aaKnown RBP14.73□□□□□ -0.05
LINC00539-202ENST00000423575 TTF2Q9UNY4 1162 aaKnown RBP14.73□□□□□ -0.05
LINC00539-202ENST00000423575 SUGT1Q9Y2Z0 365 aa14.73□□□□□ -0.05
LINC00539-202ENST00000423575 POTECB2RU33 542 aa14.72□□□□□ -0.05
LINC00539-202ENST00000423575 MAP4K4O95819 1239 aaPredicted RBP14.72□□□□□ -0.05
LINC00539-202ENST00000423575 LDHBP07195 334 aaKnown RBP14.72□□□□□ -0.05
LINC00539-202ENST00000423575 USP17L8P0C7I0 530 aa14.72□□□□□ -0.05
LINC00539-202ENST00000423575 YY1P25490 414 aa14.72□□□□□ -0.05
LINC00539-202ENST00000423575 EPS15P42566 896 aa14.72□□□□□ -0.05
LINC00539-202ENST00000423575 ZNF280AP59817 542 aaPredicted RBP14.72□□□□□ -0.05
LINC00539-202ENST00000423575 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
LINC00539-202ENST00000423575 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
LINC00539-202ENST00000423575 IDH1O75874 414 aaKnown RBP14.71□□□□□ -0.05
LINC00539-202ENST00000423575 EGFRP00533 1210 aa14.71□□□□□ -0.05
LINC00539-202ENST00000423575 LMOD1P29536 600 aaPredicted RBP14.71□□□□□ -0.05
LINC00539-202ENST00000423575 SPTY2D1Q68D10 685 aaPredicted RBP14.71□□□□□ -0.05
LINC00539-202ENST00000423575 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.05
LINC00539-202ENST00000423575 ZNF384Q8TF68 577 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms