RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 IL15P40933 162 aaPredicted RBP13.6□□□□□ -0.23
USP49-204ENST00000423567 GYG1P46976 350 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 HIRAP54198 1017 aaPredicted RBP13.6□□□□□ -0.23
USP49-204ENST00000423567 ZNF280AP59817 542 aaPredicted RBP13.6□□□□□ -0.23
USP49-204ENST00000423567 HTRA3P83110 453 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 DCPSQ96C86 337 aaKnown RBP13.6□□□□□ -0.23
USP49-204ENST00000423567 GMLQ99445 158 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 COPRSQ9NQ92 184 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 PGAP2Q9UHJ9 254 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 ADAMTSL1Q8N6G6 1762 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 SLC5A1P13866 664 aa13.59□□□□□ -0.23
USP49-204ENST00000423567 MTX1Q13505 466 aa13.59□□□□□ -0.23
USP49-204ENST00000423567 VGLL2Q8N8G2 317 aa13.59□□□□□ -0.23
USP49-204ENST00000423567 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
USP49-204ENST00000423567 LPIN2Q92539 896 aa13.59□□□□□ -0.23
USP49-204ENST00000423567 FAM84BQ96KN1 310 aaPredicted RBP13.59□□□□□ -0.23
USP49-204ENST00000423567 MXD3Q9BW11 206 aa13.59□□□□□ -0.23
USP49-204ENST00000423567 SCN9AQ15858 1988 aa13.58□□□□□ -0.24
USP49-204ENST00000423567 SASH1O94885 1247 aa13.58□□□□□ -0.24
USP49-204ENST00000423567 RLBP1P12271 317 aa13.58□□□□□ -0.24
USP49-204ENST00000423567 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
USP49-204ENST00000423567 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
USP49-204ENST00000423567 KIAA0825Q8IV33 1275 aa13.58□□□□□ -0.24
USP49-204ENST00000423567 KLRG1Q96E93 195 aa13.58□□□□□ -0.24
USP49-204ENST00000423567 YTHDC1Q96MU7 727 aaKnown RBP13.58□□□□□ -0.24
USP49-204ENST00000423567 GLIS2Q9BZE0 524 aaPredicted RBP13.58□□□□□ -0.24
USP49-204ENST00000423567 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
USP49-204ENST00000423567 EGFRP00533 1210 aa13.57□□□□□ -0.24
USP49-204ENST00000423567 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
USP49-204ENST00000423567 FKBP1AP62942 108 aaKnown RBP13.57□□□□□ -0.24
USP49-204ENST00000423567 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP49-204ENST00000423567 SCARF1Q14162 830 aa13.57□□□□□ -0.24
USP49-204ENST00000423567 ATP2B3Q16720 1220 aa13.57□□□□□ -0.24
USP49-204ENST00000423567 KRT26Q7Z3Y9 468 aa13.57□□□□□ -0.24
USP49-204ENST00000423567 FBXO33Q7Z6M2 555 aa13.57□□□□□ -0.24
USP49-204ENST00000423567 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
USP49-204ENST00000423567 TDRD7Q8NHU6 1098 aaKnown RBP13.57□□□□□ -0.24
USP49-204ENST00000423567 PANK1Q8TE04 598 aa13.57□□□□□ -0.24
USP49-204ENST00000423567 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
USP49-204ENST00000423567 TRAF5O00463 557 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
USP49-204ENST00000423567 FGFR2P21802 821 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 DNAJC5GQ8N7S2 189 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
USP49-204ENST00000423567 GGA3Q9NZ52 723 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 ABT1Q9ULW3 272 aaKnown RBP13.56□□□□□ -0.24
USP49-204ENST00000423567 JAG2Q9Y219 1238 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 AKAP2Q9Y2D5 859 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 FAM205AQ6ZU69 1335 aa13.56□□□□□ -0.24
USP49-204ENST00000423567 A0A1B0GUL6 1792 aa13.55□□□□□ -0.24
USP49-204ENST00000423567 F8W031 263 aaPredicted RBP13.55□□□□□ -0.24
USP49-204ENST00000423567 CELF2O95319 508 aaKnown RBP13.55□□□□□ -0.24
USP49-204ENST00000423567 BCAMP50895 628 aa13.55□□□□□ -0.24
USP49-204ENST00000423567 CHAF1AQ13111 956 aaPredicted RBP13.55□□□□□ -0.24
USP49-204ENST00000423567 OS9Q13438 667 aaPredicted RBP13.55□□□□□ -0.24
USP49-204ENST00000423567 MFSD14BQ5SR56 506 aa13.55□□□□□ -0.24
USP49-204ENST00000423567 ANGEL2Q5VTE6 544 aaKnown RBP13.55□□□□□ -0.24
USP49-204ENST00000423567 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
USP49-204ENST00000423567 C1orf115Q9H7X2 142 aa13.55□□□□□ -0.24
USP49-204ENST00000423567 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
USP49-204ENST00000423567 DDX19BQ9UMR2 479 aa13.55□□□□□ -0.24
USP49-204ENST00000423567 IQSEC3Q9UPP2 1182 aaPredicted RBP13.55□□□□□ -0.24
USP49-204ENST00000423567 PNMA6EA0A0J9YXQ4 647 aa13.54□□□□□ -0.24
USP49-204ENST00000423567 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
USP49-204ENST00000423567 DLGAP5Q15398 846 aa13.54□□□□□ -0.24
USP49-204ENST00000423567 CERS5Q8N5B7 392 aa13.54□□□□□ -0.24
USP49-204ENST00000423567 MKRN1Q9UHC7 482 aaKnown RBP13.54□□□□□ -0.24
USP49-204ENST00000423567 PSME4Q14997 1843 aa13.54□□□□□ -0.24
USP49-204ENST00000423567 WNT10BO00744 389 aa13.53□□□□□ -0.24
USP49-204ENST00000423567 MYO1BO43795 1136 aa13.53□□□□□ -0.24
USP49-204ENST00000423567 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP49-204ENST00000423567 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP49-204ENST00000423567 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
USP49-204ENST00000423567 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
USP49-204ENST00000423567 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
USP49-204ENST00000423567 TTF2Q9UNY4 1162 aaKnown RBP13.53□□□□□ -0.24
USP49-204ENST00000423567 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
USP49-204ENST00000423567 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
USP49-204ENST00000423567 TFCP2Q12800 502 aa13.52□□□□□ -0.25
USP49-204ENST00000423567 DEFB115Q30KQ5 88 aa13.52□□□□□ -0.25
USP49-204ENST00000423567 SSH3Q8TE77 659 aa13.52□□□□□ -0.25
USP49-204ENST00000423567 COG6Q9Y2V7 657 aa13.52□□□□□ -0.25
USP49-204ENST00000423567 ASTN2O75129 1339 aaPredicted RBP13.52□□□□□ -0.25
USP49-204ENST00000423567 CNTNAP1P78357 1384 aa13.52□□□□□ -0.25
USP49-204ENST00000423567 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 RASSF10A6NK89 507 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
USP49-204ENST00000423567 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 GORABQ5T7V8 394 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 CST9Q5W186 159 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
USP49-204ENST00000423567 C2orf69Q8N8R5 385 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 MTMR14Q8NCE2 650 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 WDR66Q8TBY9 1149 aa13.51□□□□□ -0.25
USP49-204ENST00000423567 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms