RNA–Protein interactions for RNA: ENST00000423559.2

SUFU-203, Transcript of SUFU negative regulator of hedgehog signaling, humanhuman

TSL 1 (best) BASIC

Gene SUFU, Length 2,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUFU-203ENST00000423559 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
SUFU-203ENST00000423559 KIF1CO43896 1103 aaKnown RBP12.13□□□□□ -0.47
SUFU-203ENST00000423559 EIF3JO75822 258 aaKnown RBP12.13□□□□□ -0.47
SUFU-203ENST00000423559 KCNA6P17658 529 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
SUFU-203ENST00000423559 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
SUFU-203ENST00000423559 DNAJC21Q5F1R6 531 aaKnown RBP12.13□□□□□ -0.47
SUFU-203ENST00000423559 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 PNKPQ96T60 521 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 MED4Q9NPJ6 270 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 PATL2C9JE40 543 aaKnown RBP12.13□□□□□ -0.47
SUFU-203ENST00000423559 PHACTR2O75167 634 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 DNAAF4Q8WXU2 420 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 DPF2Q92785 391 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 SDF4Q9BRK5 362 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 RAB21Q9UL25 225 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 MYH15Q9Y2K3 1946 aa12.13□□□□□ -0.47
SUFU-203ENST00000423559 NEDD4P46934 1319 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
SUFU-203ENST00000423559 CHMP4BP1P59074 171 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 FAM227BQ96M60 508 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 STK31Q9BXU1 1019 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 ABCB6Q9NP58 842 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 BIN1O00499 593 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 ME1P48163 572 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 FAM71BQ8TC56 605 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 TSPYL4Q9UJ04 414 aa12.12□□□□□ -0.47
SUFU-203ENST00000423559 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
SUFU-203ENST00000423559 PTPN21Q16825 1174 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 FAM204AQ9H8W3 233 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 A0A1B0GVL5 298 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 ISM2Q6H9L7 571 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 KCNV1Q6PIU1 500 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 MSANTD4Q8NCY6 345 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
SUFU-203ENST00000423559 CCDC196A0A1B0GTZ2 297 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 CUTAO60888 179 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 MNAT1P51948 309 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 NDUFA8P51970 172 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 FOSBP53539 338 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 CASP8Q14790 479 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 TOGARAM2Q6ZUX3 1019 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 VSTM4Q8IW00 320 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 MRPS27Q92552 414 aaKnown RBP12.1□□□□□ -0.47
SUFU-203ENST00000423559 GOLGA6L9A6NEM1 432 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 ERLIN1O75477 346 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 ERLIN2O94905 339 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 HNRNPH1P31943 449 aaKnown RBP12.1□□□□□ -0.47
SUFU-203ENST00000423559 UBASH3AP57075 661 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 SATB1Q01826 763 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
SUFU-203ENST00000423559 HSP90B2PQ58FF3 399 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 CCDC12Q8WUD4 166 aaPredicted RBP12.1□□□□□ -0.47
SUFU-203ENST00000423559 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
SUFU-203ENST00000423559 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 TMEM232C9JQI7 657 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 EXOC5O00471 708 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 LIG3P49916 1009 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 NLRP12P59046 1061 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 FAM212AQ96EL1 285 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 PUF60Q9UHX1 559 aaKnown RBP12.09□□□□□ -0.47
SUFU-203ENST00000423559 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
SUFU-203ENST00000423559 EIF4A2Q14240 407 aaKnown RBP12.09□□□□□ -0.47
SUFU-203ENST00000423559 SKIDA1Q1XH10 827 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
SUFU-203ENST00000423559 ABCC6O95255 1503 aa12.09□□□□□ -0.47
SUFU-203ENST00000423559 POTEB2H3BUK9 544 aa12.08□□□□□ -0.47
SUFU-203ENST00000423559 IKBKBO14920 756 aa12.08□□□□□ -0.47
SUFU-203ENST00000423559 TOP1P11387 765 aaKnown RBP12.08□□□□□ -0.47
SUFU-203ENST00000423559 FBXW10Q5XX13 1052 aa12.08□□□□□ -0.47
SUFU-203ENST00000423559 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.47
SUFU-203ENST00000423559 IRX2Q9BZI1 471 aaPredicted RBP12.08□□□□□ -0.47
SUFU-203ENST00000423559 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.47
SUFU-203ENST00000423559 LRRIQ3A6PVS8 624 aaPredicted RBP12.08□□□□□ -0.48
SUFU-203ENST00000423559 FOXO3O43524 673 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 TDO2P48775 406 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 VSNL1P62760 191 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 KARSQ15046 597 aaKnown RBP12.08□□□□□ -0.48
SUFU-203ENST00000423559 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 EVI5LQ96CN4 794 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
SUFU-203ENST00000423559 BAG1Q99933 345 aaPredicted RBP12.08□□□□□ -0.48
SUFU-203ENST00000423559 SIL1Q9H173 461 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 N4BP2Q86UW6 1770 aaPredicted RBP12.08□□□□□ -0.48
SUFU-203ENST00000423559 NALCNQ8IZF0 1738 aa12.08□□□□□ -0.48
SUFU-203ENST00000423559 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
SUFU-203ENST00000423559 SERPINC1P01008 464 aa12.07□□□□□ -0.48
SUFU-203ENST00000423559 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
SUFU-203ENST00000423559 ATL3Q6DD88 541 aa12.07□□□□□ -0.48
SUFU-203ENST00000423559 FAM107BQ9H098 131 aa12.07□□□□□ -0.48
SUFU-203ENST00000423559 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms