RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 F8W031 263 aaPredicted RBP19.08■□□□□ 0.64
USB1-202ENST00000423271 CAPN15O75808 1086 aa19.08■□□□□ 0.64
USB1-202ENST00000423271 GYG1P46976 350 aa19.08■□□□□ 0.64
USB1-202ENST00000423271 NOGQ13253 232 aa19.08■□□□□ 0.64
USB1-202ENST00000423271 UBE4AQ14139 1066 aa19.08■□□□□ 0.64
USB1-202ENST00000423271 BEGAINQ9BUH8 593 aa19.08■□□□□ 0.64
USB1-202ENST00000423271 PCDHAC2Q9Y5I4 1007 aa19.08■□□□□ 0.64
USB1-202ENST00000423271 MROH5Q6ZUA9 1318 aa19.07■□□□□ 0.64
USB1-202ENST00000423271 ZNF157P51786 506 aaPredicted RBP19.07■□□□□ 0.64
USB1-202ENST00000423271 BRPF1P55201 1214 aaPredicted RBP19.07■□□□□ 0.64
USB1-202ENST00000423271 MOB2Q70IA6 237 aa19.07■□□□□ 0.64
USB1-202ENST00000423271 FAM84BQ96KN1 310 aaPredicted RBP19.07■□□□□ 0.64
USB1-202ENST00000423271 MMP14P50281 582 aa19.06■□□□□ 0.64
USB1-202ENST00000423271 RARSP54136 660 aaKnown RBP19.06■□□□□ 0.64
USB1-202ENST00000423271 METTL24Q5JXM2 366 aa19.06■□□□□ 0.64
USB1-202ENST00000423271 TDRD7Q8NHU6 1098 aaKnown RBP19.06■□□□□ 0.64
USB1-202ENST00000423271 HIBADHP31937 336 aaKnown RBP19.05■□□□□ 0.64
USB1-202ENST00000423271 RFX5P48382 616 aaPredicted RBP19.05■□□□□ 0.64
USB1-202ENST00000423271 FKBP1AP62942 108 aaKnown RBP19.05■□□□□ 0.64
USB1-202ENST00000423271 VGLL2Q8N8G2 317 aa19.05■□□□□ 0.64
USB1-202ENST00000423271 ARAP2Q8WZ64 1704 aa19.05■□□□□ 0.64
USB1-202ENST00000423271 ECM29Q5VYK3 1845 aa19.04■□□□□ 0.64
USB1-202ENST00000423271 AOX1Q06278 1338 aa19.04■□□□□ 0.64
USB1-202ENST00000423271 FAM205AQ6ZU69 1335 aa19.04■□□□□ 0.64
USB1-202ENST00000423271 SLC10A3P09131 477 aa19.04■□□□□ 0.64
USB1-202ENST00000423271 DLGAP5Q15398 846 aa19.04■□□□□ 0.64
USB1-202ENST00000423271 API5Q9BZZ5 524 aaKnown RBP19.04■□□□□ 0.64
USB1-202ENST00000423271 UBTFL1P0CB47 393 aaPredicted RBP19.03■□□□□ 0.64
USB1-202ENST00000423271 FKBP1BP68106 108 aa19.03■□□□□ 0.64
USB1-202ENST00000423271 CFAP100Q494V2 611 aa19.03■□□□□ 0.64
USB1-202ENST00000423271 RASAL3Q86YV0 1011 aa19.03■□□□□ 0.64
USB1-202ENST00000423271 APOBEC3FQ8IUX4 373 aaKnown RBP19.03■□□□□ 0.64
USB1-202ENST00000423271 MTMR14Q8NCE2 650 aa19.03■□□□□ 0.64
USB1-202ENST00000423271 CCDC102AQ96A19 550 aa19.03■□□□□ 0.64
USB1-202ENST00000423271 IQSEC3Q9UPP2 1182 aaPredicted RBP19.03■□□□□ 0.64
USB1-202ENST00000423271 SPDYE2BA6NHP3 402 aa19.02■□□□□ 0.64
USB1-202ENST00000423271 UBE2Q2LH0YL09 131 aa19.02■□□□□ 0.64
USB1-202ENST00000423271 PDE8BO95263 885 aa19.02■□□□□ 0.64
USB1-202ENST00000423271 SPDYE6P0CI01 402 aa19.02■□□□□ 0.64
USB1-202ENST00000423271 KIF23Q02241 960 aaPredicted RBP19.02■□□□□ 0.64
USB1-202ENST00000423271 PTPN12Q05209 780 aaKnown RBP19.02■□□□□ 0.64
USB1-202ENST00000423271 MFSD14BQ5SR56 506 aa19.02■□□□□ 0.64
USB1-202ENST00000423271 FBXO33Q7Z6M2 555 aa19.02■□□□□ 0.64
USB1-202ENST00000423271 CLRN2A0PK11 232 aa19.01■□□□□ 0.63
USB1-202ENST00000423271 CA12O43570 354 aa19.01■□□□□ 0.63
USB1-202ENST00000423271 PRMT6Q96LA8 375 aaPredicted RBP19.01■□□□□ 0.63
USB1-202ENST00000423271 MEIS3Q99687 375 aa19.01■□□□□ 0.63
USB1-202ENST00000423271 LRRFIP2Q9Y608 721 aaKnown RBP19.01■□□□□ 0.63
USB1-202ENST00000423271 KIF16BQ96L93 1317 aa19■□□□□ 0.63
USB1-202ENST00000423271 EYA2O00167 538 aa19■□□□□ 0.63
USB1-202ENST00000423271 TTLL12Q14166 644 aaPredicted RBP19■□□□□ 0.63
USB1-202ENST00000423271 VPS37DQ86XT2 251 aa19■□□□□ 0.63
USB1-202ENST00000423271 TNNQ9UQP3 1299 aa19■□□□□ 0.63
USB1-202ENST00000423271 COL1A1P02452 1464 aaPredicted RBP19■□□□□ 0.63
USB1-202ENST00000423271 CASP8AP2Q9UKL3 1982 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 SSC5DA1L4H1 1573 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 FGFR2P21802 821 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 NF2P35240 595 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 BCAMP50895 628 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 RBM5P52756 815 aaKnown RBP eCLIP18.99■□□□□ 0.63
USB1-202ENST00000423271 CHAF1AQ13111 956 aaPredicted RBP18.99■□□□□ 0.63
USB1-202ENST00000423271 PRKG1Q13976 671 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 PUM3Q15397 648 aaKnown RBP18.99■□□□□ 0.63
USB1-202ENST00000423271 GRIK5Q16478 980 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 ATG9AQ7Z3C6 839 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 DEFB129Q9H1M3 183 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 TTF2Q9UNY4 1162 aaKnown RBP18.99■□□□□ 0.63
USB1-202ENST00000423271 FZD1Q9UP38 647 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 ZBED9Q6R2W3 1325 aa18.99■□□□□ 0.63
USB1-202ENST00000423271 CAVIN4Q5BKX8 364 aa18.98■□□□□ 0.63
USB1-202ENST00000423271 CSRNP1Q96S65 589 aa18.98■□□□□ 0.63
USB1-202ENST00000423271 SIL1Q9H173 461 aa18.98■□□□□ 0.63
USB1-202ENST00000423271 VEZTQ9HBM0 779 aa18.98■□□□□ 0.63
USB1-202ENST00000423271 BCAR3O75815 825 aa18.97■□□□□ 0.63
USB1-202ENST00000423271 INTS3Q68E01 1043 aaKnown RBP18.97■□□□□ 0.63
USB1-202ENST00000423271 ARHGAP45Q92619 1136 aa18.97■□□□□ 0.63
USB1-202ENST00000423271 AKAP11Q9UKA4 1901 aa18.97■□□□□ 0.63
USB1-202ENST00000423271 MYO1BO43795 1136 aa18.96■□□□□ 0.63
USB1-202ENST00000423271 IFIT1P09914 478 aaKnown RBP18.96■□□□□ 0.63
USB1-202ENST00000423271 TRIM27P14373 513 aa18.96■□□□□ 0.63
USB1-202ENST00000423271 RNF186Q9NXI6 227 aa18.96■□□□□ 0.63
USB1-202ENST00000423271 SERPINA10Q9UK55 444 aa18.96■□□□□ 0.63
USB1-202ENST00000423271 PA2G4Q9UQ80 394 aaKnown RBP18.96■□□□□ 0.63
USB1-202ENST00000423271 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
USB1-202ENST00000423271 SLC5A1P13866 664 aa18.95■□□□□ 0.62
USB1-202ENST00000423271 CRKP46108 304 aa18.95■□□□□ 0.62
USB1-202ENST00000423271 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
USB1-202ENST00000423271 ANGEL1Q9UNK9 670 aaKnown RBP18.95■□□□□ 0.62
USB1-202ENST00000423271 PPP2R3BQ9Y5P8 575 aa18.95■□□□□ 0.62
USB1-202ENST00000423271 MYH13Q9UKX3 1938 aa18.95■□□□□ 0.62
USB1-202ENST00000423271 TRPA1O75762 1119 aa18.94■□□□□ 0.62
USB1-202ENST00000423271 CIAO1O76071 339 aa18.94■□□□□ 0.62
USB1-202ENST00000423271 MKRN3Q13064 507 aaKnown RBP18.94■□□□□ 0.62
USB1-202ENST00000423271 SPDYE2Q495Y8 402 aa18.94■□□□□ 0.62
USB1-202ENST00000423271 ARMC9Q7Z3E5 817 aa18.94■□□□□ 0.62
USB1-202ENST00000423271 LPIN2Q92539 896 aa18.94■□□□□ 0.62
USB1-202ENST00000423271 TDRD3Q9H7E2 651 aaKnown RBP18.94■□□□□ 0.62
USB1-202ENST00000423271 SAGE1Q9NXZ1 904 aa18.94■□□□□ 0.62
USB1-202ENST00000423271 ZNF70Q9UC06 446 aaPredicted RBP18.94■□□□□ 0.62
USB1-202ENST00000423271 RASA3Q14644 834 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms