RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 LPIN2Q92539 896 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 RRAGDQ9NQL2 400 aaPredicted RBP10.42□□□□□ -0.74
SNCA-206ENST00000420646 SMIM22K7EJ46 135 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 PDE6AP16499 860 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 FGFR2P21802 821 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 MAGEB6Q8N7X4 407 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 MIGA1Q8NAN2 632 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 SPATA5Q8NB90 893 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 FTOQ9C0B1 505 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNCA-206ENST00000420646 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 BCL2L12Q9HB09 334 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 JAG2Q9Y219 1238 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 NRAPQ86VF7 1730 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.41□□□□□ -0.74
SNCA-206ENST00000420646 PRKAB2O43741 272 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 ADD2P35612 726 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 ZNF445P59923 1031 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 CCDC152Q4G0S7 254 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 OTUD7BQ6GQQ9 843 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNCA-206ENST00000420646 CELF1Q92879 486 aaKnown RBP10.41□□□□□ -0.74
SNCA-206ENST00000420646 TAF1P21675 1872 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 KLRK1P26718 216 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 VPS72Q15906 364 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 SENP2Q9HC62 589 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 RFX7Q2KHR2 1363 aa10.41□□□□□ -0.74
SNCA-206ENST00000420646 MYO5AQ9Y4I1 1855 aaKnown RBP10.41□□□□□ -0.74
SNCA-206ENST00000420646 IGHMBP2P38935 993 aaKnown RBP10.4□□□□□ -0.74
SNCA-206ENST00000420646 TTC6Q86TZ1 520 aa10.4□□□□□ -0.74
SNCA-206ENST00000420646 MPNDQ8N594 471 aa10.4□□□□□ -0.74
SNCA-206ENST00000420646 ARMT1Q9H993 441 aa10.4□□□□□ -0.74
SNCA-206ENST00000420646 ABCF2Q9UG63 623 aa10.4□□□□□ -0.74
SNCA-206ENST00000420646 MROH5Q6ZUA9 1318 aa10.4□□□□□ -0.74
SNCA-206ENST00000420646 PDIA3P30101 505 aaKnown RBP10.4□□□□□ -0.74
SNCA-206ENST00000420646 TBC1D10CQ8IV04 446 aa10.4□□□□□ -0.74
SNCA-206ENST00000420646 CCDC144CPQ8IYA2 1237 aa10.4□□□□□ -0.74
SNCA-206ENST00000420646 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
SNCA-206ENST00000420646 ZNF213O14771 459 aa10.4□□□□□ -0.75
SNCA-206ENST00000420646 ANTXR2P58335 489 aa10.4□□□□□ -0.75
SNCA-206ENST00000420646 IMMTQ16891 758 aaKnown RBP10.4□□□□□ -0.75
SNCA-206ENST00000420646 PARP10Q53GL7 1025 aa10.4□□□□□ -0.75
SNCA-206ENST00000420646 GIMAP6Q6P9H5 292 aa10.4□□□□□ -0.75
SNCA-206ENST00000420646 CCNL1Q9UK58 526 aaPredicted RBP10.4□□□□□ -0.75
SNCA-206ENST00000420646 PTPDC1A2A3K4 754 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 PRC1O43663 620 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 MBD3O95983 291 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 SLC5A1P13866 664 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 CAMK4Q16566 473 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 LRSAM1Q6UWE0 723 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 NSUN7Q8NE18 718 aaKnown RBP10.39□□□□□ -0.75
SNCA-206ENST00000420646 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNCA-206ENST00000420646 TCRBV5S4A2TA0A5A2 114 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 H3BQV1 296 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 MBD4O95243 580 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 ZFYP08048 801 aaPredicted RBP10.39□□□□□ -0.75
SNCA-206ENST00000420646 ARID4AP29374 1257 aaPredicted RBP10.39□□□□□ -0.75
SNCA-206ENST00000420646 CTDSPL2Q05D32 466 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 ADGRA1Q86SQ6 560 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 FNBP4Q8N3X1 1017 aaPredicted RBP10.39□□□□□ -0.75
SNCA-206ENST00000420646 AIDAQ96BJ3 306 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
SNCA-206ENST00000420646 ABCC12Q96J65 1359 aa10.39□□□□□ -0.75
SNCA-206ENST00000420646 AFF2P51816 1311 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 B4E1Z4 1266 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 MYL10Q9BUA6 226 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
SNCA-206ENST00000420646 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 AKAP11Q9UKA4 1901 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 UBE2Q2LH0YL09 131 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 PFKFB2O60825 505 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 CYB5R4Q7L1T6 521 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 ARHGEF1Q92888 912 aaKnown RBP10.38□□□□□ -0.75
SNCA-206ENST00000420646 STRBPQ96SI9 672 aaKnown RBP10.38□□□□□ -0.75
SNCA-206ENST00000420646 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 ZNF652Q9Y2D9 606 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 WNK3Q9BYP7 1800 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 KLF18A0A0U1RQI7 1052 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 LIG1P18858 919 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 LCORLQ8N3X6 602 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 ZKSCAN3Q9BRR0 538 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 EPB41L4AQ9HCS5 686 aaPredicted RBP10.38□□□□□ -0.75
SNCA-206ENST00000420646 LRP2BPQ9P2M1 347 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 ATP6V1DQ9Y5K8 247 aa10.38□□□□□ -0.75
SNCA-206ENST00000420646 MYH3P11055 1940 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 NPHP1O15259 732 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 HMGB1P09429 215 aaKnown RBP10.37□□□□□ -0.75
SNCA-206ENST00000420646 UBE2HP62256 183 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 RRP12Q5JTH9 1297 aaKnown RBP10.37□□□□□ -0.75
SNCA-206ENST00000420646 NBPF5PQ86XG9 351 aaPredicted RBP10.37□□□□□ -0.75
SNCA-206ENST00000420646 MB21D2Q8IYB1 491 aaPredicted RBP10.37□□□□□ -0.75
SNCA-206ENST00000420646 ANKRD36CQ5JPF3 1778 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 ZPR1O75312 459 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 FDPSP14324 419 aaKnown RBP10.37□□□□□ -0.75
SNCA-206ENST00000420646 PDCP20941 246 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 RXRBP28702 533 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 LRRFIP1Q32MZ4 808 aaKnown RBP10.37□□□□□ -0.75
SNCA-206ENST00000420646 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
SNCA-206ENST00000420646 ANKRD18AQ8IVF6 992 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms