RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 FRAT2O75474 233 aaPredicted RBP25.42■■□□□ 1.66
HMGXB4-203ENST00000420166 CCDC102BQ68D86 513 aa25.42■■□□□ 1.66
HMGXB4-203ENST00000420166 KIF1BPQ96EK5 621 aa25.42■■□□□ 1.66
HMGXB4-203ENST00000420166 GNL3LQ9NVN8 582 aaKnown RBP25.42■■□□□ 1.66
HMGXB4-203ENST00000420166 JAG2Q9Y219 1238 aa25.42■■□□□ 1.66
HMGXB4-203ENST00000420166 SHTN1A0MZ66 631 aa25.41■■□□□ 1.66
HMGXB4-203ENST00000420166 FKBP1AP62942 108 aaKnown RBP25.41■■□□□ 1.66
HMGXB4-203ENST00000420166 H7C1D1 291 aa25.4■■□□□ 1.66
HMGXB4-203ENST00000420166 CHAF1AQ13111 956 aaPredicted RBP25.4■■□□□ 1.66
HMGXB4-203ENST00000420166 CERS5Q8N5B7 392 aa25.4■■□□□ 1.66
HMGXB4-203ENST00000420166 DCTPP1Q9H773 170 aa25.4■■□□□ 1.66
HMGXB4-203ENST00000420166 ADARB2Q9NS39 739 aaKnown RBP25.4■■□□□ 1.66
HMGXB4-203ENST00000420166 ADAMTSL1Q8N6G6 1762 aa25.4■■□□□ 1.66
HMGXB4-203ENST00000420166 COL1A1P02452 1464 aaPredicted RBP25.4■■□□□ 1.66
HMGXB4-203ENST00000420166 ZBTB22O15209 634 aa25.39■■□□□ 1.66
HMGXB4-203ENST00000420166 GORABQ5T7V8 394 aa25.39■■□□□ 1.66
HMGXB4-203ENST00000420166 PNMA8AQ86V59 439 aaPredicted RBP25.39■■□□□ 1.66
HMGXB4-203ENST00000420166 EAF2Q96CJ1 260 aaPredicted RBP25.39■■□□□ 1.66
HMGXB4-203ENST00000420166 IL1RAPL2Q9NP60 686 aa25.39■■□□□ 1.66
HMGXB4-203ENST00000420166 SEMA3EO15041 775 aa25.38■■□□□ 1.65
HMGXB4-203ENST00000420166 TOMM70O94826 608 aa25.38■■□□□ 1.65
HMGXB4-203ENST00000420166 USP17L8P0C7I0 530 aa25.38■■□□□ 1.65
HMGXB4-203ENST00000420166 ZNF280AP59817 542 aaPredicted RBP25.38■■□□□ 1.65
HMGXB4-203ENST00000420166 MFSD14BQ5SR56 506 aa25.38■■□□□ 1.65
HMGXB4-203ENST00000420166 DBNDD2Q9BQY9 259 aa25.38■■□□□ 1.65
HMGXB4-203ENST00000420166 EAPPQ56P03 285 aaPredicted RBP25.37■■□□□ 1.65
HMGXB4-203ENST00000420166 USP50Q70EL3 339 aaPredicted RBP25.37■■□□□ 1.65
HMGXB4-203ENST00000420166 AACSQ86V21 672 aa25.37■■□□□ 1.65
HMGXB4-203ENST00000420166 RBM46Q8TBY0 533 aaKnown RBP25.37■■□□□ 1.65
HMGXB4-203ENST00000420166 DBNLQ9UJU6 430 aaKnown RBP25.37■■□□□ 1.65
HMGXB4-203ENST00000420166 CENPBP07199 599 aaPredicted RBP25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 POTEIP0CG38 1075 aa25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 POTEJP0CG39 1038 aa25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 HDAC1Q13547 482 aaPredicted RBP25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 RASGRF1Q13972 1273 aa25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 KIAA0825Q8IV33 1275 aa25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 CLASRPQ8N2M8 674 aaKnown RBP25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 TRPM4Q8TD43 1214 aa25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 TBC1D22AQ8WUA7 517 aa25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 CCDC8Q9H0W5 538 aaPredicted RBP25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 TLR7Q9NYK1 1049 aaKnown RBP25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 DENND2AQ9ULE3 1009 aa25.36■■□□□ 1.65
HMGXB4-203ENST00000420166 ARID4AP29374 1257 aaPredicted RBP25.35■■□□□ 1.65
HMGXB4-203ENST00000420166 SAMD7Q7Z3H4 446 aa25.35■■□□□ 1.65
HMGXB4-203ENST00000420166 LDHDQ86WU2 507 aa25.35■■□□□ 1.65
HMGXB4-203ENST00000420166 LRRCC1Q9C099 1032 aa25.35■■□□□ 1.65
HMGXB4-203ENST00000420166 EGFRP00533 1210 aa25.34■■□□□ 1.65
HMGXB4-203ENST00000420166 MMP14P50281 582 aa25.34■■□□□ 1.65
HMGXB4-203ENST00000420166 TBC1D10BQ4KMP7 808 aaPredicted RBP25.34■■□□□ 1.65
HMGXB4-203ENST00000420166 OGFOD1Q8N543 542 aa25.34■■□□□ 1.65
HMGXB4-203ENST00000420166 WDR66Q8TBY9 1149 aa25.34■■□□□ 1.65
HMGXB4-203ENST00000420166 PDS5AQ29RF7 1337 aaKnown RBP25.34■■□□□ 1.65
HMGXB4-203ENST00000420166 AKAP11Q9UKA4 1901 aa25.33■■□□□ 1.65
HMGXB4-203ENST00000420166 UQCRFS1P1P0C7P4 283 aa25.33■■□□□ 1.65
HMGXB4-203ENST00000420166 HIRAP54198 1017 aaPredicted RBP25.33■■□□□ 1.65
HMGXB4-203ENST00000420166 KIF4BQ2VIQ3 1234 aa25.33■■□□□ 1.65
HMGXB4-203ENST00000420166 CCDC158Q5M9N0 1113 aa25.33■■□□□ 1.65
HMGXB4-203ENST00000420166 HDAC9Q9UKV0 1011 aa25.33■■□□□ 1.65
HMGXB4-203ENST00000420166 TTC39AQ5SRH9 613 aa25.32■■□□□ 1.64
HMGXB4-203ENST00000420166 RBM26Q5T8P6 1007 aaKnown RBP25.32■■□□□ 1.64
HMGXB4-203ENST00000420166 MYOZ2Q9NPC6 264 aa25.32■■□□□ 1.64
HMGXB4-203ENST00000420166 F8W031 263 aaPredicted RBP25.31■■□□□ 1.64
HMGXB4-203ENST00000420166 SMARCA5O60264 1052 aaPredicted RBP25.31■■□□□ 1.64
HMGXB4-203ENST00000420166 CHADLQ6NUI6 762 aa25.31■■□□□ 1.64
HMGXB4-203ENST00000420166 SMC1BQ8NDV3 1235 aa25.31■■□□□ 1.64
HMGXB4-203ENST00000420166 CLEC11AQ9Y240 323 aa25.31■■□□□ 1.64
HMGXB4-203ENST00000420166 IFIT2P09913 472 aaKnown RBP25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 SCARF1Q14162 830 aa25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 GRIK5Q16478 980 aa25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 ZNF512BQ96KM6 892 aaPredicted RBP25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 BCL11AQ9H165 835 aa25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 RWDD1Q9H446 243 aaPredicted RBP25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 HMG20BQ9P0W2 317 aa25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 SUGT1Q9Y2Z0 365 aa25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 SALL1Q9NSC2 1324 aa25.3■■□□□ 1.64
HMGXB4-203ENST00000420166 MCAMP43121 646 aa25.29■■□□□ 1.64
HMGXB4-203ENST00000420166 PI16Q6UXB8 463 aa25.29■■□□□ 1.64
HMGXB4-203ENST00000420166 SPATA5Q8NB90 893 aa25.29■■□□□ 1.64
HMGXB4-203ENST00000420166 TTF2Q9UNY4 1162 aaKnown RBP25.29■■□□□ 1.64
HMGXB4-203ENST00000420166 POLR2AP24928 1970 aaKnown RBP25.29■■□□□ 1.64
HMGXB4-203ENST00000420166 FSTL1Q12841 308 aa25.28■■□□□ 1.64
HMGXB4-203ENST00000420166 ZC3H15Q8WU90 426 aaKnown RBP25.28■■□□□ 1.64
HMGXB4-203ENST00000420166 GCC1Q96CN9 775 aa25.28■■□□□ 1.64
HMGXB4-203ENST00000420166 ZGPATQ8N5A5 531 aaKnown RBP25.27■■□□□ 1.64
HMGXB4-203ENST00000420166 PGAP2Q9UHJ9 254 aa25.27■■□□□ 1.64
HMGXB4-203ENST00000420166 ECM29Q5VYK3 1845 aa25.26■■□□□ 1.63
HMGXB4-203ENST00000420166 IGHDP01880 384 aa25.26■■□□□ 1.63
HMGXB4-203ENST00000420166 C1QTNF8P60827 252 aa25.26■■□□□ 1.63
HMGXB4-203ENST00000420166 MAP1SQ66K74 1059 aaPredicted RBP25.26■■□□□ 1.63
HMGXB4-203ENST00000420166 MAST3O60307 1309 aa25.26■■□□□ 1.63
HMGXB4-203ENST00000420166 PRDX5P30044 214 aa25.25■■□□□ 1.63
HMGXB4-203ENST00000420166 MTMR14Q8NCE2 650 aa25.25■■□□□ 1.63
HMGXB4-203ENST00000420166 ZBED3Q96IU2 234 aaPredicted RBP25.25■■□□□ 1.63
HMGXB4-203ENST00000420166 SNRKQ9NRH2 765 aa25.25■■□□□ 1.63
HMGXB4-203ENST00000420166 SERPINA10Q9UK55 444 aa25.25■■□□□ 1.63
HMGXB4-203ENST00000420166 ASTN2O75129 1339 aaPredicted RBP25.24■■□□□ 1.63
HMGXB4-203ENST00000420166 WNT10BO00744 389 aa25.24■■□□□ 1.63
HMGXB4-203ENST00000420166 LDHBP07195 334 aaKnown RBP25.24■■□□□ 1.63
HMGXB4-203ENST00000420166 HDLBPQ00341 1268 aaKnown RBP25.24■■□□□ 1.63
HMGXB4-203ENST00000420166 DLGAP5Q15398 846 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms